Mdol020570.3
Basic Information
- Insect
- Megamerina dolium
- Gene Symbol
- bab1
- Assembly
- GCA_963854835.1
- Location
- OY978528.1:58365149-58367094[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.6e-17 4.2e-14 52.9 0.0 1 43 55 98 55 100 0.95 2 3 6.2 1e+04 -2.8 1.3 4 13 191 200 188 215 0.68 3 3 0.44 7.2e+02 0.9 0.0 5 15 295 305 292 308 0.89
Sequence Information
- Coding Sequence
- ATGTTAGAGAATTCACATGCTTGGATGGGTGCATCTGGTTCTTCGATTGCAGCAGATAGCTACCAATATCAATTGCAATCAATGTGGCAAAAATGTTGGAACACCAATCAAAATCTGATGCATCATTTGCGTTTTCGCGAACGTGGTCCACTAAAATCATGGCGTCCCGAAACGATGGCCGAAGCTATTTTCAGCGTCCTCAAGGAAGGTCTGTCATTGTCGCAAGCCGCACGCAAATACGACATCCCATATCCGACATTTGTGCTGTATGCGAATCGTGTGCACAATATGCTGGGTCCCTCTATTGACGGTGGTCCTGATTTGCGTCCCAAAGGAAGAGGTCGTCCCCAACGTATACTACTTGGCATTTGGCCCGATGAACATATCAAAGGTGTTATTAAGACGGTGGTCTTTCGTGATGTCAAGGAACTCAAAGATGAGGGCCTACCACATCTACCCTATGGTCGACATTCGCCGGTTTTTCCTTTTCAGGAAGGTCTCTTGAATTATCCAGGTGCTGCGTGTCCAAATGGTATACCAACACCAACGGGCGATAATATGTCTCAGGAGGCGACAGCAGCAGCGGTGGCCGCTGTTGCGCACAATCTGCGACAACACATGCAAATGGCTGCAGCAGCACAGCATCAGCACACCGAAAGTGGGCCCACTGGTCCAAACCTCTTCAATATACCACCGCATTTGCAGCCGCACTTAGCTGCCGCAGCAGCTGCTGCCAGTGGCAGTGGTAGTAGTACTGGTGGCGGTGGAGCAAGCATTTCACCTGCATTGAGTTCCGGCGTTGGTTCAATGTTGGGCCAACGCCATCCAAGTTCGCCATGTGCAAGCGCTGGATTGACAGGACTCTCTAATTTACCACCCGGTATGGCTGCTGCTCTGCATATGGTCGGTAGtggtagtagtggtggtggtattgGTGGTCCAGGCAGTCGTTGTGATCCATCATCCGTAATGCTAactcaacaacatcaacatcaattgCAGCAATTGCAtctgcaacaacagcaacatgcacttcagcaacaacaacaacagcaacaacaacaacaacaacatcatcatcagcaacagcacTCGTCTCCACACGGACTCGCTTTCTCCAGTGCAAGTTCGCATCCATTAAATTCCAGCTCAATAGCAGCGGCAACAACAACTTccacacaacaacagcaacaactacaacaacaacaacagaaattaCAAGCAGCTAGTTCCTCTGGCAGTACTGTCATATCCTCATCATCTGTATATTCAAGTTCCGCATCAGCAAAACCGAAATCAGCATCTGCTTCAccacatcagcagcagcatcaacaacaacaacaacaacaacaacaacagcagctacagcatcagcaccaacaacaattgcaacaatccTTAGAGTATCGTAGTCGCAACAGTCCACCCAGTAGTGGTGATACACTCTTACATTCGCCACTTACCGAATTAGGTCTAGAGATGGTCTATAAACCCTCACGTCCTTTCTCACCTACACGACTCTTTGCCGATGATCTTGCTGATTTAGTGGGTGTCGTTGCATCAACTACGACAATTGTTACAAATATTTCCACAGCATCAATGGCCACGgtaacaccatcatcatcggCAGTCACCGCCTGCTCGACGACTAGCAGTAATCTCAGTTCCAGTAATATTAAAATCGAACCCATTACTACGAGTAGTGAGTAA
- Protein Sequence
- MLENSHAWMGASGSSIAADSYQYQLQSMWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDVKELKDEGLPHLPYGRHSPVFPFQEGLLNYPGAACPNGIPTPTGDNMSQEATAAAVAAVAHNLRQHMQMAAAAQHQHTESGPTGPNLFNIPPHLQPHLAAAAAAASGSGSSTGGGGASISPALSSGVGSMLGQRHPSSPCASAGLTGLSNLPPGMAAALHMVGSGSSGGGIGGPGSRCDPSSVMLTQQHQHQLQQLHLQQQQHALQQQQQQQQQQQQHHHQQQHSSPHGLAFSSASSHPLNSSSIAAATTTSTQQQQQLQQQQQKLQAASSSGSTVISSSSVYSSSASAKPKSASASPHQQQHQQQQQQQQQQQLQHQHQQQLQQSLEYRSRNSPPSSGDTLLHSPLTELGLEMVYKPSRPFSPTRLFADDLADLVGVVASTTTIVTNISTASMATVTPSSSAVTACSTTSSNLSSSNIKIEPITTSSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -