Basic Information

Insect: Megamerina dolium
Gene Symbol: ttk
Assembly: GCA_963854835.1
Location: OY978528.1:67099492-67105209[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.2e-19 1e-15 58.0 0.0 2 45 594 638 593 638 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.2e-19	1e-15	58.0	0.0	2	45	594	638	593	638	0.97

Sequence Information

Coding Sequence: ATGTCAGTACAACAATTCTGTCTGCGTTGGAACAATCATCAGCCGAATTTTATTTCGGTGTGTTCTTCTTTATTACACAATGGAACATTAGTCGATGTAACATTAGCGGCTGAAGGTAGACAATTGCAAGCTCATAAAATTGTACTTTCGGCGTGTAGTTCATATTTTCAAACGCTTTTTACAACGAATCCCTGTCAACATCCTATAGTTATTTTAAAAGACGTTCAATATGACGACCTTAAAACTATGGTCGATTTTATGTACTATGGCGAAGTAAATGTATCACAAGAACAATTACCACATATATTGAAAACGGCTGAGATGCTTAAAATTAAAGGACTTGCTGAAATGCCCACCGATCCAGCAAATTTAACCAAATCCGATAGCAAATCATCAAATGAACCAACTGAGTTGGTCGGCAATACAGGAAACGGTCAATCAGGTAGTAGCAGCAGTGGCGCTGGTCTAGGCGGTAGTGCGAGTGACAGTcaacaacaatctaTTTGGGGAAGTGCAGAAAGTCAgttccaacaacaacagcaacaacagcatcatcatcatcagcaacaacagcagcagcagcaactgcaacagcaacagcaaacacaacagcaacaacatcaccaccatcaacaatcgcaacatcatcagcaacagcaacaacaaagtaGCCAGACACAAACCacccaacaacaacatcatcaaggAAGAAGAACACCATCACCAATGGGTCCTGGAGCATCACCAGCTACTCGGCGAAAACGCCTACGAAAATCCTCCAATAATGGTTCTGGTGATCGTAATAATTCCGATGAGCAGCCTCATACCTCATTAGATACTAGCCAAAATCCGGGTAGTATAAGTCTTTCACAAATGAGTCAAATGTCATTTGCTGCTGGCGCTAATGCTGGTCCTGGGTCAAGTACTTTAAGCGGAATTGGTGGTGCcagtggcggtggtggtggtcaTACATTACATTCTGCAAAACTTTTAAAAGAATCGGCAAATACCAATTTAGAACCTCATCCACAGGATTCTGATAGTTTAGATGATGGACATGGACATGTACATATGCAAATTAAACCAGAAGTTGACATAAGTGGTGTACAACAATCGATGCCATTAGATATATCAGGTGCCACAACACCATCGGAACATGATGCACCCAATTCACAATCGTCACATtcagGTCTGCAATGGACGGTCGTTGATCCAAATTATTCACGCTTTTCGCTGTCATCTTGTCAGGCTAATTTAATTGGTAATAGCACTGGTGGCAGCCAAAATTCCGCCAACGGTGGTAGTAatgagcaacagcagcaacaacaacaacgacagcaacaACAGGATACTCAAACGACCAGCAGCagtcaacagcagcagcagcagcaacaacagcaacagcatcagcattTGCAGCAATTGCattatcagcaacagcagcagcagcagcaaacacAAAATGCAGCATATTCGCCACAAATTATAACCGTTAATAGTCTGGTTGGTGGTTACACAACGACAACATCTCAGAATTTATCGCCTCCTTCGCCGAATGAGTCCAGCATGGTGCAATCTGTCTATAGTCAAGGACCAACACCGACTCAATCGCCAGTTCATGCTGGTTCTGGTGGTGGCGTAGGAAATACATCAAGTGGCAGCAGTACGGTTGGTGGCAATATATCGACCGGTAATGCTACCAGTTCGAATGCCACCGGTGGTGCGGCTGGTGCTGGCAATCAAGTGGTGAAGCGTAAACGTTCCGTCAATCCACAAGGTGATGAAAACTTTATACGTGCCCTGGAGGCGGTACGTTCTGGCGGTATTGGTTTCTGCAAAGCCGCCCGTTTGTATGGGGTCAACAATCGCACGCTCTGGCTGGAGTATAAGAAGCGAGGTTATCCCGTTTCACGGCCCAGCATCAAATCGCGTGTCGTCAAGCAAGAGCCCAATCTGTCGCCATCACCCACACCGCCCGCCAATGCTGCCGATGACACAACAAATGAGAACTTTGAACACATAGCTGCGGCTGCAGCCGTTGCTGCGGCCCAAACAGCTGCCCTAAATATGCAAATACCACCGACTTCAGACACACCGACACCATCGCTAATGTGCACACCACATCATGCCGCCGCTGCGAGCGGTGGTGCCGCCACCCATCCAATGGGTGTGATGAGTTTCTTAGATACACGACACATGGACTTTCCCACCAGTTTGCATACAATGTCGCGACAGCGTTACATTGATGCAACCGGCGCCACAAATGCTAGCAGCAGTGCCGGCGGCACCAGCTCCATTAATGTTAATCCGACGGCTGCAATGAATTTACAAGAATCAATACCACCACTATCaacgacagcagcagcagcagcagcagcatcatcaccatcatctctACTGGAAATAACTGCTGCCACTGATGATGGCAGTGTGTCAGTGTGTGATGACGCTAGTGTCGTAatggaaattaataataataatattgcatgcGACATTGACGTCTGTTGTGCTGCTGGTCTTGGTGATGATggagttaattttcaaaatgcatcagcagcagcaacacttTTTCTAAACGATTTTGTGACTGCTGAGTCTACGTCgctaacaaccacaacaacaacagtaacacgAGGCGCTGGTGTTGGTTATAATTCCAATATACATTATTTACGAAAGGCTTAA
Protein Sequence: MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSNEPTELVGNTGNGQSGSSSSGAGLGGSASDSQQQSIWGSAESQFQQQQQQQHHHHQQQQQQQQLQQQQQTQQQQHHHHQQSQHHQQQQQQSSQTQTTQQQHHQGRRTPSPMGPGASPATRRKRLRKSSNNGSGDRNNSDEQPHTSLDTSQNPGSISLSQMSQMSFAAGANAGPGSSTLSGIGGASGGGGGHTLHSAKLLKESANTNLEPHPQDSDSLDDGHGHVHMQIKPEVDISGVQQSMPLDISGATTPSEHDAPNSQSSHSGLQWTVVDPNYSRFSLSSCQANLIGNSTGGSQNSANGGSNEQQQQQQQRQQQQDTQTTSSSQQQQQQQQQQQHQHLQQLHYQQQQQQQQTQNAAYSPQIITVNSLVGGYTTTTSQNLSPPSPNESSMVQSVYSQGPTPTQSPVHAGSGGGVGNTSSGSSTVGGNISTGNATSSNATGGAAGAGNQVVKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKSRVVKQEPNLSPSPTPPANAADDTTNENFEHIAAAAAVAAAQTAALNMQIPPTSDTPTPSLMCTPHHAAAASGGAATHPMGVMSFLDTRHMDFPTSLHTMSRQRYIDATGATNASSSAGGTSSINVNPTAAMNLQESIPPLSTTAAAAAAASSPSSLLEITAATDDGSVSVCDDASVVMEINNNNIACDIDVCCAAGLGDDGVNFQNASAAATLFLNDFVTAESTSLTTTTTTVTRGAGVGYNSNIHYLRKA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00967295;
90% Identity: iTF_00967295;
80% Identity: iTF_00967295;