Basic Information

Gene Symbol
Arid2
Assembly
GCA_963854835.1
Location
OY978526.1:94375827-94383014[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.6e-26 1.1e-22 81.1 0.0 2 89 75 160 74 160 0.95
2 2 4.8 2.1e+04 -3.1 0.0 71 86 1969 1984 1958 1985 0.77

Sequence Information

Coding Sequence
ATGTCAATATCAGAGCAAAACAAATTGAAGGTGTTATTACCACCATTGAATTGCAATGAGATTTCGACAAGAATTACAAACACTAGCACATGTGATGGCGTCCTTGTCTCTGCGACTTCACGAGCTAAAAATCGGGAAATTAACTTTATGGCGTCCAGTAATGATAAAAATGACGATTGTTTCAGTACAGTTGTTGTTAAAAGTAAAATACCACATAAATCACCAGAAGAGTTCTACGTTGATTTACAAAAGTTCCATGACCGCAaggggACACCCATTACTCAGGTGCCTAAGATCAGTGGCCGCATAATAGATTTGCATCATTTGTACACTGAAGTTACAAATCGAGGCGGTTTTCGAAAAGTAAACTTGCGTGACGAATGGAAAGATATATTAccagaattaaattttcaagatAAATGTGTAAATGCCGCTGTTGGAGTTAAACAAATCTATAGGCGGTATttggaaaattatgaaaaattaaatttctttagtGAAGATGCAGATAAAATGGAAGCCATCGAAGCAATGGAACAACCCGAAAGTGGACGCTCTCGCGCACGATACCAATCAAATGCGTATATGTCAAATAGTGCTGCAAATACCGTTCCTATGTCATATAATTATCGACAACATATGGTTAATATGGATCGTCGGCGTATATATGGGCTTTCGACAGACTTTCATAACCCATCACCTTTTGAGAAAATGATGCTAGCATTAGTATCACCTTTGCCAAATGAACAGGATTTTGCTATAAATGCCTGTATAGCAATGGCAAATGAGAATAAACAAACGCTTCAGTTAAACGAATACCCAAAGCTTTTGGATCTGCTACTCGCGCACGTTGGAGTGTTTTCTGATAACTCATTATGTAAACtttttcaacatatttacaCTAGTATTCGCAgtcattcattattttatttttggcgaGTGCTTCTTTATGATAAACCACAAATATTGGAATTATTCAATGCTGAGCAAACATTCCATGAGACAGATTTAACAGATACACCAGATTATGTGGATCCAATTAAACAACtgataaaagaagaagaactcTTTACTACAGATTTGTTTAATTTGACTAGCACGGACAGCATGTTGGACTATGTCGGCAAACGAGTACAACAAATTGTTAGTATTTTACGAAATCTTAGTTTTTCTGATGAGAATGGCTCAATGTTTGCAAAAAGTCGTACTTGTTTACGTTTTATTGTGATGAGTGCTAATATACGTTGtgGTAATATTCACATTCAAGCGCTTGACATTGCTGGTAATATTGCAACAGAATTGGAATTGCTTGATCCTACTACTGATGAATTGTCGCGATGTTTTATGGCCACACTTACCGATGGTATTGAGAGTGTTGATCGCGGcgttattataaattgtttagaAGTACTTTATAAACTTTTCCAGAAGGAAGGCAATGaggattatatttataaatgcctcaatttaaaattttaccaATCCATTTGTTCATTGCTATCACTCAGTGATATTATGTTATTAATGTTTACTCTGGAAGCAATTTATGCACTCACTTCAATGGGTACCCGTTTCTGTCACATGATAATGCAGGTCCGTGGTGTAATCGATCAACTTGTATCATTGGTTACTGTGGAAGCGCAATCATATGGACCAGATGGCTGTATACTTATGCGTGTTGTTGAAACTGTGCCCGGCAATATGTTGCCGATGGTTGCCCAAAATATtgctaatttgcaaaatattgcaagcatacaaaagcaacaacaaagccAGTCAATTCTAACAACacatatgcaacaacaacaacaagaagcagTTCTTGATCAAACGGTATTGCCTGATACAGATCAAACACAATTGAATCAACCTCAGCAGCAACAGTATCAGCACCAGATTTTGTCACAGcaattcacacaaaatttcaccCAAGAAGATGAACAATATGCACTGGCGTGGTTGGGTGCGACCTTTGAACGAGCTGCCACTGTTGACAGTCACGTGGAGCAGCAGGAACTCTATCGTATGTATCTGTCACATTGTCAAAAATCAGGAAAGCACTCTGTTGTTAACAACTTGCAATTTCCGCGCTTAGTGcggttaatatttaataataacgtCGGTCCTGTAACCGTTAAACTGTCGGATGGTTCAGAGTTACCCGGTTTTCATTATGTTGCAATACGCTTACGTGCGCAACCGTTACCAATACAATCAAAGACTTGTCAAGTCGTAGATACTAAATTAACAAAAAGCCATGAAGTTTGTGTAAGTGCAGCACGAAAACCCAAGAAGAAGCAAAAGCAAATTCAACTAGAGCCAAATTCAATGGACGATACGATGGACGATTCAGTGAAACAAGATAATATAACTACATCATTGACGATTACTAGTGCTGCAAATACAATCACCACtgatgaaacaaaaatagacATGTATTCAGCAACACCAGCGAAACCGGTTATATCAACCGCAGATATTGACAAAAAAGCAGttgTGAACGCTGCCCAACAACAACTCCAAACGTCAATGGTAGTGCATAAAAATTCTACATCGAACGTGGAAACGGCGACCAATCCCCAAATGCAATCATACTGCACACCTCttcaacaacaaccacaaccaaCTCAACAATCCGtgcaacatcagcaacagccATCTTCATCTCTCATAAAGAGTCTGTTAGCGAATAAAGTAAATCAACGACAACAAAAGCAGAAGGAGCTTACTGTGACAGCGAGTTttcaaacaacaacaccaacaaatgCACCAGCTTCCGTAGCAGGCAACATTTCGCAATCACATCCGCAGCAACCGATCAAAGTGACAAGCACCGCAATAACCGCTTTCGTCAATAATCCACTAATGCAGAATACGTCCGTTAAAGTAGgacaaacaacaataaagccATTGAATCCACAAGTATCGTTGGAGAAGAAACAGACTCAAATAATTGAATCCGTTCCCCCACCTTTAGCACCATTAAGTGGTGCGAACGTAGCTAAGGATGCTAGCGGTCGTCCGATGATTCTCGCCAATCAAATGTTGGTCGAAATTCTTGACAAAAAGAACGCGGATCCCCCAATACCGACAACAATCGCCAAGCGTAAATTGGAAGATATTCAAAGTGTCGGAATGGAGATCGTGAAACGCATTGCGCTAGACGatagcaaaaataatgaaacggATGAAACAACTTTGACACCATCAAAAAACGCTGCCAATTTATACGCTGAAATGGCCGCGTCCATTTTGGAAGATGAGGATTTGGACGATATTCCTCCATTGCAATTACCATCAGATACTTCAACTTCAACAGTAAACGCAAGCAATGAACAATTTCCACATCAATCTCTAGTTATAGCATCGACTCCTAAACTGCAACCAACACTACCACAGCAGCCACTGACAACACCGACTACGTCGTTAACACCACAAAATCTACAACGGCAATTGATATTCCAAACACCTCATTCACCGCAATTAAAAATTGTACCACAAAATGACAATACGTCACAACACGCTATACCGACTGCAATGGCTACTATTAAAACAGATCAAGGACTACAGACAGTACCGGTAATACTGCAACAAAAGTCAAATGATCGTAGCACGCAATCCCAATTCATCCAGCAAGTCATTCAGCAAAATTCTATAAACTCACCACAGCCAGCTACTCAGTATGTTCTTGCTACAAATCCACAAGGACAAACGTATTTGGTAGCACAACAAACGCAGTCAGCACCGCCACCGCCTCCACCTCCCACACAAACAGTGCTTGTTACACAAACACCTCAACAGCAATCTGTGGGTACAAAGACGATTATCATATTACAACAGCAACCGCTACCCACAACACAGTCCCAACAGCTTATCGCTGCAACACCGAACACCACGCAAAAGATGATTATGACTACGTCGCAAGGACAACAATTATTGATTACACAACGTACCACACAAGCTGCTGCTATTGGTGCAGGACAAAGTCAACAGCAAATCTTTATAAACTCGCAAACCGGTACAACAACGCATATACAGCATGTACCTGTGAGTAGTTCTCTAGCTGTATCACAATGTGGTATTACCGGTGGAACAAATATATTGCAACGCCAAATAATACAATCACAAACACCAACGCAAACACAGGCAACACAATCGCAGTATCACCAGCATACGGGACAAATATCACCATCACTATTATCACAATTGAATCACATACCTGCAACAATTAAATTGCACCAACCTCAACCTACTGCAATTGGCGCCCATCCACATCAGCAGATGGGCACAATACCTCGACTGGGTAAATCAGTTTCAATAATACAGTCTGCCGCTCCAACGCATAATCCGACACCTCCACCGCCTCCTATACAAATACCGCAATTGCAACAGCATCAGTCCATTATACAACAACACATTATATCTGGGCCGCCAGAGAAGCGTCAAGTCATTTTAGGTGGGCGCCCTATCGAAATTAAAGAAACCCTCATTACTCAGGCGCAACCGCCGCCACAACAAAGTCAACTCAATTCACAAACGATCATTACAAAGCAatcacaacagcagcagcagcaacaacaacagcagcaacaaccacAGCAATTGACACGCACTACAGCGCAAGCACTCTTACAGCAACAGCAAATACGTACGGTTATAGAGCATCAACAACGACACCCATCCATTATACAACAAAAAGTCGTTGCATCGTTGCAGTCAAAGATTGCTGAACATCATACAatccagcagcagcagcagcagcagcatcaacaaaatatttcgcAAACAAAACCACCACAAGCTATTCTTCCAAAGGCGACAGCACAGCCTGCAATGCAACCAAACCTGACAACTATAAAGCGGCAAATAATTACCGGAGCTCAAATTACCACAGGAACACATATTCGCGCGCAATCTGAAGCGATTGTTCAAACGCCGATTTCGTGGAACAAAACATCGACTTCAACAACGACACCTATAGAGACGGATAACGCTGAACCCCCACCATTGGTTGTATCACACTCATTGGCTTCAAGCGCATTGGCTGTTAGTTCGTCCGCAATTGTATCATCAGCAATAGGAAAGACTGATGCTGTAATTATAAACCAACAAAATACGGTATCCGAAAAAAGCAATGATTCAAGTACCAGCAATATTTCCAATGCAAACATAACAGTCACGCAACCTGCTGACGCTGGAGGAATAAATGTACCAGTAAGTACGTCGACAGTATCGGTATGCTCAACAATGCCACCCATACAATCCTCAACTGTATCGACATCAGTACTCGCACCAATACTTCCAAATCAAAATCAGCCATTGTCACTGCAACAATCACGCTTGACCACAACGTCCGGATACGTTGCTGATATGAATTGGTTATATATTTGTGATTGGCGCAATTGCCCACGCCGCAAATATAAATCTCTTAATGATTTACATCACCATGCATGTACCGTACATTGCCCCGATCATTTGGAGGCCGGTGCCGAAATATTCTGTCAATGGGGTCATGGTCCGGGACTTTGTGATGGTATACCGCGGAAGCGATATTCCCTTATGACACATATCATTGATCGGCATTTGACTGTGGACAGTCTGCGCAGTGCAATGCAACGGCGAATTGCTACCGGTACAGTTAATATGCAACCAACGCAGCCACCTGTCACCATAGTCCGTAATATGGAGCACCAGTCGCAAGGTAGCTCAACAGTGTCGCCAGTTCTTTGTAGTTCGTCGCCAACCTCGTTGCTCTCTTCAACTGGAAGTTCAGCAATACATGCAATAAAACGGCATAACACAGACTTTATTAACCCCAAAGAACTGATGGATGAAAACGAGGGTCCCGTTACGAAAAGTATTCGCCTAACAGCAGCATTGATAATACGCAACCTAGTTACTTATACGTCTACGGCAAAGCGTCTACTACGTTGTTATGAATCGCATTTGGCAAATGTTGCCCTCAGCAATGTGGAATCTAGTGGCGCCATTTCGCATATTCTCTACGAATTAAATAATTAA
Protein Sequence
MSISEQNKLKVLLPPLNCNEISTRITNTSTCDGVLVSATSRAKNREINFMASSNDKNDDCFSTVVVKSKIPHKSPEEFYVDLQKFHDRKGTPITQVPKISGRIIDLHHLYTEVTNRGGFRKVNLRDEWKDILPELNFQDKCVNAAVGVKQIYRRYLENYEKLNFFSEDADKMEAIEAMEQPESGRSRARYQSNAYMSNSAANTVPMSYNYRQHMVNMDRRRIYGLSTDFHNPSPFEKMMLALVSPLPNEQDFAINACIAMANENKQTLQLNEYPKLLDLLLAHVGVFSDNSLCKLFQHIYTSIRSHSLFYFWRVLLYDKPQILELFNAEQTFHETDLTDTPDYVDPIKQLIKEEELFTTDLFNLTSTDSMLDYVGKRVQQIVSILRNLSFSDENGSMFAKSRTCLRFIVMSANIRCGNIHIQALDIAGNIATELELLDPTTDELSRCFMATLTDGIESVDRGVIINCLEVLYKLFQKEGNEDYIYKCLNLKFYQSICSLLSLSDIMLLMFTLEAIYALTSMGTRFCHMIMQVRGVIDQLVSLVTVEAQSYGPDGCILMRVVETVPGNMLPMVAQNIANLQNIASIQKQQQSQSILTTHMQQQQQEAVLDQTVLPDTDQTQLNQPQQQQYQHQILSQQFTQNFTQEDEQYALAWLGATFERAATVDSHVEQQELYRMYLSHCQKSGKHSVVNNLQFPRLVRLIFNNNVGPVTVKLSDGSELPGFHYVAIRLRAQPLPIQSKTCQVVDTKLTKSHEVCVSAARKPKKKQKQIQLEPNSMDDTMDDSVKQDNITTSLTITSAANTITTDETKIDMYSATPAKPVISTADIDKKAVVNAAQQQLQTSMVVHKNSTSNVETATNPQMQSYCTPLQQQPQPTQQSVQHQQQPSSSLIKSLLANKVNQRQQKQKELTVTASFQTTTPTNAPASVAGNISQSHPQQPIKVTSTAITAFVNNPLMQNTSVKVGQTTIKPLNPQVSLEKKQTQIIESVPPPLAPLSGANVAKDASGRPMILANQMLVEILDKKNADPPIPTTIAKRKLEDIQSVGMEIVKRIALDDSKNNETDETTLTPSKNAANLYAEMAASILEDEDLDDIPPLQLPSDTSTSTVNASNEQFPHQSLVIASTPKLQPTLPQQPLTTPTTSLTPQNLQRQLIFQTPHSPQLKIVPQNDNTSQHAIPTAMATIKTDQGLQTVPVILQQKSNDRSTQSQFIQQVIQQNSINSPQPATQYVLATNPQGQTYLVAQQTQSAPPPPPPPTQTVLVTQTPQQQSVGTKTIIILQQQPLPTTQSQQLIAATPNTTQKMIMTTSQGQQLLITQRTTQAAAIGAGQSQQQIFINSQTGTTTHIQHVPVSSSLAVSQCGITGGTNILQRQIIQSQTPTQTQATQSQYHQHTGQISPSLLSQLNHIPATIKLHQPQPTAIGAHPHQQMGTIPRLGKSVSIIQSAAPTHNPTPPPPPIQIPQLQQHQSIIQQHIISGPPEKRQVILGGRPIEIKETLITQAQPPPQQSQLNSQTIITKQSQQQQQQQQQQQQPQQLTRTTAQALLQQQQIRTVIEHQQRHPSIIQQKVVASLQSKIAEHHTIQQQQQQQHQQNISQTKPPQAILPKATAQPAMQPNLTTIKRQIITGAQITTGTHIRAQSEAIVQTPISWNKTSTSTTTPIETDNAEPPPLVVSHSLASSALAVSSSAIVSSAIGKTDAVIINQQNTVSEKSNDSSTSNISNANITVTQPADAGGINVPVSTSTVSVCSTMPPIQSSTVSTSVLAPILPNQNQPLSLQQSRLTTTSGYVADMNWLYICDWRNCPRRKYKSLNDLHHHACTVHCPDHLEAGAEIFCQWGHGPGLCDGIPRKRYSLMTHIIDRHLTVDSLRSAMQRRIATGTVNMQPTQPPVTIVRNMEHQSQGSSTVSPVLCSSSPTSLLSSTGSSAIHAIKRHNTDFINPKELMDENEGPVTKSIRLTAALIIRNLVTYTSTAKRLLRCYESHLANVALSNVESSGAISHILYELNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-