Musi002954.1
Basic Information
- Insect
- Megalurothrips usitatus
- Gene Symbol
- pnr
- Assembly
- GCA_026979955.1
- Location
- CM049595.1:2118465-2120421[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-17 3.4e-14 51.5 3.2 1 34 165 197 165 199 0.97 2 2 5.2e-19 1e-15 56.4 6.2 1 35 222 255 222 256 0.98
Sequence Information
- Coding Sequence
- ATGTTCCAGACCAGCTGCGCCGTCGGTCCCGACATGTACCCTGAGTCGACgtcgacggggacgaccacgggatacctccagcagcaacagcaacagcagcagcagcaaacgcccagccagcagccacaacaggcgcaacatcaacagcaccaccagcaccagcaccaccatcaccaccagcagcaccagcacccgcacgaccagcaacaccaacaccagcagcaggatcaccagcagccgGTGTACGTGCCGTCCACGCGGGCCGTGCTCCCCTCGCAGTACGGCGGCGCCGCGGCCACGACCTGGGGGTCGTCCTGGGGCAGCCACCAGTCGGGGCACGAGGGCTACCAGTACCCCCACCACGCCGCCCACCACGCCCTCTACGCCCAGAACATGATGATGGCGCCCTGGCGGGCCTACGACGGCGCCGCCTTCCAGAGGGCCTCTCCCTACGACGGCGCCATGGACTTCCAGTTCGGCGAGGGCCGCGAGTGCGTCAACTGCGGTGCGGTGTCGACGCCGCTGTGGCGCCGCGACGGCACGGGCCACTACCTGTGCAACGCGTGCGGCCTGTACCACAAGATGAACGGCATGAACCGGCCGCTCGTCAAGCCGTCCAAGCGGCTGGCCAACGAGACGGCCACGCGGCGCCTGGGGCTGTGCTGCACCAACTGCGGCACACGGACCACGACGCTCTGGCGCCGCAACAACGAGGGCGAGCCCGTCTGCAACGCGTGCGGCCTGTACTTCAAGCTGCACGGCGTCAACCGGCCCATGAGCATGCGCAAGGACGGCATCCAGACGCGGAAGCGGAAGCCCAAGAAGCAGCAGGGCGGCGGTGCCGGTGGCGGCGGCGGCGGCGGTCAGGGCCACGGCCAGGGCGCCTCCCCCAACACGGCCGCCAGCACTACCACGACCACCGCCTCGGCGTCTTCGCCGCTGTCCCAGTCCTCGGTGGCGTCCAGCGACACCAAGCACTCATCGGAGAAGCTCTCCTCGTCCCCGGAGCAAGGCTGCAAGAAGCGGACCGAGGGCTCGCTGGCGGCCATGTACTCCGGCGCGCACCACCTCATCAAGACCGAGCCCCTGGGCCTCGGGGGCGGGCTGGGGTCGCTCAGCCACCTGGGCTCCCTCGGGGGGTCTCTGGGGCCCGGCGTCGGCTACCCCGGCACCCACGTCCCCTTCACCGCCGGGCAGCAGCAAGTCTTCGGCCTGCCCGGCCACCACCACGCCCACACGGCCGCCTCCGCGTCGCCGCCCGGGTCGCTGGCCACCGACTACCCCCATCACCATCACCACCACCATCACCACAGTCACCACCACAGCAAACTCATGGCGTCGTCATAG
- Protein Sequence
- MFQTSCAVGPDMYPESTSTGTTTGYLQQQQQQQQQQTPSQQPQQAQHQQHHQHQHHHHHQQHQHPHDQQHQHQQQDHQQPVYVPSTRAVLPSQYGGAAATTWGSSWGSHQSGHEGYQYPHHAAHHALYAQNMMMAPWRAYDGAAFQRASPYDGAMDFQFGEGRECVNCGAVSTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPSKRLANETATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPMSMRKDGIQTRKRKPKKQQGGGAGGGGGGGQGHGQGASPNTAASTTTTTASASSPLSQSSVASSDTKHSSEKLSSSPEQGCKKRTEGSLAAMYSGAHHLIKTEPLGLGGGLGSLSHLGSLGGSLGPGVGYPGTHVPFTAGQQQVFGLPGHHHAHTAASASPPGSLATDYPHHHHHHHHHSHHHSKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -