Musi008181.1
Basic Information
- Insect
- Megalurothrips usitatus
- Gene Symbol
- CAMTA1
- Assembly
- GCA_026979955.1
- Location
- CM049597.1:12711686-12755002[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.5e-48 7.6e-44 147.6 2.1 2 116 95 207 94 207 0.98 2 3 0.55 6.5e+03 -3.7 0.6 9 32 342 365 335 370 0.57 3 3 0.2 2.4e+03 -2.3 0.2 12 38 521 546 516 552 0.72
Sequence Information
- Coding Sequence
- ATGATATGTGGGACGGACGTATCGGCACGGAAGTGGAGGCCGGCGTCGTCGGCATCGCCGTCTTCTTCGCCGCCGCCGCCATCAACGCCGACACCAACGACGGCCGGCGCGACCGCGATAGCCGAGGGCGGCCGGCCCTGCGAGCACCACCACGGCGACGACGACGGCTACCCCGTCCGGGGCACGGAGGCACCCGCGGGTGACCCGGGCGACGACGATGGCGAGCCGATCAAGCTCCCGGACAACTTGGAGAGCCTGCCCAGGGCGGAGCACTTCCCCAGCATCCGGCATCGCTGGAACACTAACGAGGAAATCGCTGCCGTCCTCATCGCCTTTGAGCGGCACACCGAGTGGCAGTCCAAGGAGGTCAAGATCAGGCCGAAGAGCGGCTCCATGCTGCTGTACTCCCGCAAGAAGGTGCGGTACCGGCGCGACGGCTACTGCTGGAAGAAGCGGAAGGACGGCAAGACGACCCGCGAGGACCACATGAAGCTCAAGGTGCAGGGCACCGAGTGCATCTACGGCTGCTACGTCCACTCGGCCATCCTGCCCACGTTCCACCGGCGCTGCTACTGGCTGCTGCAGAACCCTGACATCGTTCTGGTGCACTACCTGAACGTGCCGTACCCGGACGACAACAAGATGGTGGCTATCTCGCCCAGCCTGGCGCTGTGGGGTGACAAGAAGGAGTGGACGAAGGAAGAGCTGGTGTCCCAGCTCAAACCCATGTTCTACAGCGAGGATGAACCGGACCACAACAACGAGCTCGAAATTTCCACGGCAGAGACGGTGGAGTCGATCGTGACGCAGCTGATGGAGCGGCAGCGGGCCGCGCGCGCCGCCACGCTGTCCAAGCAGCTCGAGTGCGGCTGCCCGGACTCGACGTGCGCCGACGGCAAGACGTGCTCCCACCCCATCCGCCGCATCACCCCGCTGGAGCCGCACCGCAGCAACCAGGTGTCCTCCACGACGGGctcctcgctcatcacgcagcggcaccacgccgcccagcaccagctgcaccagcagcagcagctgcagcagctgcagcaccaccaggccgcctcgcagctggtgcaccagcagcagcagccgcagcagcagcagcagGCGCCGCCGCTCGTGCTCAGCCTGTCGCAGATCCAGACCAGCAGCCTGCTCATCCTCAACAACGCGGCCAACGGCCAGGCCAACCTGGGGCCCGCCTCGGCGCACCAGGTCGCCACCGTCACCTCGTTCGTGCGCAACGTGCCCGCCGCGTCGCTGCACCACCACAACCCGCACCACCTCATGAAGCCCGCCTCGCACGCCAAGGCCGTCGTGTCCGAGGCCTCGGCCGCCGTGGTCATGAAGCAGGACCAGGAGAGCATGGAGGTGAACACGTGCCGCATGGCGGCCATGACGGCCGTCAGCCAGAGCAGCAGCACCGTCGTCAGCGTCACCAGCACCAACATGGACGTCACCAACGGCAACATCGCAGATTTTGTGATGTACGACAACATCGGGTTCAGTCAGGAGACGCAACACCTGCAGGTGGTGAGCAGCGCCAGCAACCAGCAGGTGCAGCAGATGCAACAGGTGCAGCAGGTGCAGCAGGCCATCATGGACAAGCCGAGGAGCAGCCCCCCTTCCCCGTCCAAGCACATGGACACGAGGTGCAGCCCGGACCTGCAGTCGTTCTgcgaggaggcggtggggagcggcggctgcggtaacaagaccggcggcgcggcgggcggcggcggcggcggcggcggcggcggcggcggcggcggcggcggcggcggcggcggcggcggcgacggcaacacctctgccggcttcttcgaCGCCCTGGAGATGACCCAGGAGGACATACAACGGACGCTCTCCGCCAACATGCCCATGTCGTGCGCCTCCGACCAAAGACTCCACGCGCCGATGGACACCGTGCCGTCAGTGCAGGAGACCAGTCCACACGAGATGTCACCACATGACCTCAACCCCATGGACTTTATTGAAGGCTGTGAAGTAGTGAAGGAGTGCTCCGATGCTATTGCCCAGCTCATGAAGTTGGCCTCGCAACTCTACAAGTTGCTTGTAGATGCAGAGGGTAAAGATGAAGTAGGCTTCACACCATTGATGTGGTCATGCTCCAAAGAGTCCATGTAG
- Protein Sequence
- MICGTDVSARKWRPASSASPSSSPPPPSTPTPTTAGATAIAEGGRPCEHHHGDDDGYPVRGTEAPAGDPGDDDGEPIKLPDNLESLPRAEHFPSIRHRWNTNEEIAAVLIAFERHTEWQSKEVKIRPKSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMVAISPSLALWGDKKEWTKEELVSQLKPMFYSEDEPDHNNELEISTAETVESIVTQLMERQRAARAATLSKQLECGCPDSTCADGKTCSHPIRRITPLEPHRSNQVSSTTGSSLITQRHHAAQHQLHQQQQLQQLQHHQAASQLVHQQQQPQQQQQAPPLVLSLSQIQTSSLLILNNAANGQANLGPASAHQVATVTSFVRNVPAASLHHHNPHHLMKPASHAKAVVSEASAAVVMKQDQESMEVNTCRMAAMTAVSQSSSTVVSVTSTNMDVTNGNIADFVMYDNIGFSQETQHLQVVSSASNQQVQQMQQVQQVQQAIMDKPRSSPPSPSKHMDTRCSPDLQSFCEEAVGSGGCGNKTGGAAGGGGGGGGGGGGGGGGGGGGGGDGNTSAGFFDALEMTQEDIQRTLSANMPMSCASDQRLHAPMDTVPSVQETSPHEMSPHDLNPMDFIEGCEVVKECSDAIAQLMKLASQLYKLLVDAEGKDEVGFTPLMWSCSKESM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -