Musi009057.1
Basic Information
- Insect
- Megalurothrips usitatus
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_026979955.1
- Location
- CM049599.1:893112-912629[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-18 4e-15 54.7 0.0 1 44 284 328 284 328 0.96 2 2 1.6e-18 1.4e-15 56.1 0.0 1 43 703 746 703 748 0.95
Sequence Information
- Coding Sequence
- ATGGGCAGGTGGAAATGGCGGCAACTGGGAACCATCGGCACCTGGGACGAACACGACCACGGCGAAGCAGCCTGCCCTGCCGAGGAGGCGGCCAAGCCCTCGGGGCTCCAGGACAGCAGCAGACCTCCCCAGGACTTCGAGCCCCGCCGGGACCGGCAGTGCTACTTCTGTGACGACCCGCTGGACTCGAGCACGCGCATCGCCTCCGACAGCGAGGACGACAGCGGCAGCGTGGCGAGCGAGGGGGAGGCCGGCGGCGCATGCACGCTCCGCAACATGACCACCCTGGAGGCCGTCACGTCCATGGCGGCGTCCCTCGCGGCCGTGGCCGCCTTCAAGTCGTCCCAGGGCAGCAACTCGACGGCCACCTCGACGGCCGGCGCCGGCCCCCAGGCGGCGCAGGGCCTGTACCCGCTGGGGTCGCTGGCCAACCTACCGGCATGGTACAACCACGTGGCAGCGGTGGCAGCCGCGGCGCAGCAGCAGCAGCAGCAGCAGGACTCGAGCCGGAGCACGCCGCTGGACTCGCACTCCCTCGCCGGCTCCCCGGGGCCCGGCTCGGGGCCCAACCACAGTCCGGGCGCGGGGCCCAGCCCCTCCACGTCAACGACGCCGGCCTTTCCACCGTCGGCGTCCTCGCCCGGCACGCTCTCCCCCGGCGGCGCCTGCGGCGCGGGCGGGGCCAGCCCCGTCGACATGCCGATGCCGCTTGACCTGAGCGCCAAGGCGGCCGCCATCGCCCTCGCCATGGAGAGGGACGCCCTCCGGGACCTGAGGGTGCCCGATAGCAAGAACATCTTCAAGGCCCGGCCGCGAGCCAACACGGCGCTGACGCAGCGGCGGACCTACACCGAGGACGAGCTTCAGGCGGCGCTGCGCGACATCCAGAGCGGCAAGCTGGGCACGCGCCGCGCCGCGGTCATATACGGCATACCCCGGTCCACGCTGCGCAACAAGGTGTACAAGCTGACCATGGAGCGCAAGTGCGACCCCGCCAGCCTCGTCATGGCCGCCGCCGACCCCACCCGCCTGGCGCTGAGCGCGCTCGCGCTGCCGCCCGAGGACGACGACGGCGCGCTGTCCCCCGGCGAGGACGAGCTCGGCGACAAGGGCATCAAGTCGGACAGCCCCGCCGCGCTGGCGCCCGAGTCGCTGCGGCTGCTGCTGCAGCACGGCATGCGGAGGAAGGCGGGCAGCGAGGGCAGCGAGGAGGGCGCCTCGCCGCCCCCGTCCGGACTGCCGCCCGCCTTCCCCGGCGCGGAGCAGTGGGGGCTGCCGGGGCTGGACTACGCCGCGCTCGCGCCCTACATCACCAAGCTGCTGGGCGCGCACCAGTCCCTCCTCACGCGGAACACCCCCGGCCCCGGGCCCGGCCTCGGGCCCACCACCCCGGGCGGCAGCGGCGGCGACAGTCCCGGGGTGGACGCCGACTTCCTCCCCAAGTTCCCGCCGCCGCTGCTGCCCGACTTCCTCTTCCGGATGATGACGGAGGACCGCGCGCAGGGGCCGTTCCACAACGGGTCCGGGCCGGGCGAGGCGCGCGACGGCCGCGACGGCGAGGACAAGCGCAGCACGGCGTCGCCGTCCATCAAGTCCGACGCCGACGACGACGGCCGGCCCACGTCGCCGCATGTGATACTCAAGATTCCGTCCTTCAAACCAACCACCTCCAAGAACGGCGGCGTGGAGGGCGTCGGCTCGGGCGTGACGCTGGCTGCGTTCGCCCGGTGCGGCAGCGGCAGCGGCGGCAGCGGCGGCGAGTCTAGTCAGCACTCCGAGCACGGCGCGCCCCTCACCGCGGCGCCCGCGCCCTCCGTCAGCCCGCCCAGCACGGCCCAGCAGATCATGGCCAACAAGGCCCTGGCCGCCAAGTTCCCCCACCTGAGGCTCGGCGGTACTCCGCCGGGGTCGCTGTTCGACCTGAAGCGGTCGCACTTTGGCAGCCCCGTGTCCCACCACGCCATGGCCGAGTCCGTCATGAAAAGCATGCAGCACCAACAACAGCAGCAACAGCAGACGGCGAAGACCTCCTGCTCCAGCACGCCCTCCACCAACACGGGCAGCGGCAAGGGCACGCGGCCCAAGCGCGGCAAGTACCGCAACTACGACCGCGACGCGCTCAACGAGGCCGTGAAGGCGGTGCAGCGCGGCGAGATGAGCGTGCACCGCGCTGGCTCCTTCTACGGCGTTCCGCACTCCACCCTCGAGTACAAGGTCAAGGAGCGCCACCTGATGAGGCCGCGGAAGAGGGACCCCAAACCGCAGCCCCCCGCCGACGACAAGGCCAAGACGGACGCCTCGCAGCCCCCGAATGTGGCGAACGTGCTGAGGCTGTCGCCGGGCGACAAGATGCCGCTGGCGGGCCTCCCCGGGCTGGGCGGCCTCCCGGGGCCGGCGCCCAACGGACTGAAGCCGCGCTTCGACCCGCCGGGCATCCCGTCGCTGTACCCGTTCCCCTTCTGGACGGCGGGCTTCCCGCCGCACCTTCCGGCGCTCGACTTCAGCACGCAGGCGGCGGCGTCCTTCAACTCCAACTCCAAGCAGTTCCAGATGGCGTCGCAGATGATGCAGAGGTTGCAGGACGCGCAGGACAGCAGTAGGACCAATGCGGGACCACCGCCTCATCCAGGGACCACGACGACCTCCCCCGGACCGGGCCACAACCGCAGCCCCGGGCCCAGGTCAAGTCCAGATCCGGTGCTGAGGCCCGGGGTCGGCCTGCCGCCGCGCGAGCCCAGCCCGCCGAGGACGGGGCCGGGGTCCACGTCAGGGGCGGGCCCGGGGGCCGCGGCGCTGGCGCTCGGCCTCAAGAGGAGCCGCGACGCGGACGAGACGATAGACGACAGCTCCAGCGACAACAACACCTTCCTGGACGGGATCATCCGCTACGGCCTAGAGAAGGGCTTGTCTAGGCCGTCCAAGGAGGCCGTCGAGAAGATGGCCGACAACGCCTTGCTGGACTCGCTGTGTCGTAGCCGTCTGGACGGTCGATTGGACGGCCGACTGGACATCCGGATGGACGCTGCGCGCGCCCGGCAACGGACGTCGAGCAGCTCCGAGGACGACGAAGTGCGGAGGCCGCCACTCTCCCTGCTCCACCCAAACGTGGTGCACTTGTCGCCCTCGTCGGACGGCTCTGAGGACAAGAACTCCCACCACGACGTGTCGGAGGACGCCCAAGGCATCGATGAGCGGTTACCGAGGCCGAACAACAGCAACGTGAAACCATTCCATGCAAACCATTCCCCCCCGCAGATCCCGCAGGACGGCGAGTGTCCCTGCTGGGCGGGCGGCGGCGCGGCGCCCGCCCAGGCGGACAGACGGCGCTGGCGCTGCCCCGCGGCCTCGTTGTTCATCCTCACGTCCGCCCGCGGCGATGCACCGAGTTTCCTCGGCGGGGCCTCGGGGGAGCCTCTGTGGAGTACGCCGCGCTGCGGCGCTCACCTCGACACGTCGCCGTGCAAACAGACCATGATGAGCTCCGGGATGGACTCGGCGCCGTCGGCCACGTGA
- Protein Sequence
- MGRWKWRQLGTIGTWDEHDHGEAACPAEEAAKPSGLQDSSRPPQDFEPRRDRQCYFCDDPLDSSTRIASDSEDDSGSVASEGEAGGACTLRNMTTLEAVTSMAASLAAVAAFKSSQGSNSTATSTAGAGPQAAQGLYPLGSLANLPAWYNHVAAVAAAAQQQQQQQDSSRSTPLDSHSLAGSPGPGSGPNHSPGAGPSPSTSTTPAFPPSASSPGTLSPGGACGAGGASPVDMPMPLDLSAKAAAIALAMERDALRDLRVPDSKNIFKARPRANTALTQRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLTMERKCDPASLVMAAADPTRLALSALALPPEDDDGALSPGEDELGDKGIKSDSPAALAPESLRLLLQHGMRRKAGSEGSEEGASPPPSGLPPAFPGAEQWGLPGLDYAALAPYITKLLGAHQSLLTRNTPGPGPGLGPTTPGGSGGDSPGVDADFLPKFPPPLLPDFLFRMMTEDRAQGPFHNGSGPGEARDGRDGEDKRSTASPSIKSDADDDGRPTSPHVILKIPSFKPTTSKNGGVEGVGSGVTLAAFARCGSGSGGSGGESSQHSEHGAPLTAAPAPSVSPPSTAQQIMANKALAAKFPHLRLGGTPPGSLFDLKRSHFGSPVSHHAMAESVMKSMQHQQQQQQQTAKTSCSSTPSTNTGSGKGTRPKRGKYRNYDRDALNEAVKAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDPKPQPPADDKAKTDASQPPNVANVLRLSPGDKMPLAGLPGLGGLPGPAPNGLKPRFDPPGIPSLYPFPFWTAGFPPHLPALDFSTQAAASFNSNSKQFQMASQMMQRLQDAQDSSRTNAGPPPHPGTTTTSPGPGHNRSPGPRSSPDPVLRPGVGLPPREPSPPRTGPGSTSGAGPGAAALALGLKRSRDADETIDDSSSDNNTFLDGIIRYGLEKGLSRPSKEAVEKMADNALLDSLCRSRLDGRLDGRLDIRMDAARARQRTSSSSEDDEVRRPPLSLLHPNVVHLSPSSDGSEDKNSHHDVSEDAQGIDERLPRPNNSNVKPFHANHSPPQIPQDGECPCWAGGGAAPAQADRRRWRCPAASLFILTSARGDAPSFLGGASGEPLWSTPRCGAHLDTSPCKQTMMSSGMDSAPSAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -