Musi011057.1
Basic Information
- Insect
- Megalurothrips usitatus
- Gene Symbol
- kn
- Assembly
- GCA_026979955.1
- Location
- CM049604.1:993300-1001160[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-133 4.1e-130 434.2 0.0 183 386 46 263 43 265 0.99 2 2 1e-08 4e-05 21.5 10.2 413 488 264 340 262 388 0.68
Sequence Information
- Coding Sequence
- ATGAGCTACAACTACACCGCCTCGCTGTGCCGCCACCGCATCGTCCCCTCCCGGCGGGAGGAGAGGGAGGAGGAGGAGGAGGAGGAGGGGGAGGGGGAGGAGGAGGAGGGGGAGAAGGAGAAGGAGTCCCTGTGGTTTTTCCTGAAGTTCTTCCTCAAGTGCAACCAAAACTGTTTAAAGAACGCCGGCAACCCGCGGGACATGCGGAGGTTTCAGGTGACGATAGCGAGCCAGATCGGCGTGGACGGTCCGCTGCTCGCCGTGTCCGACAACATGTTCGTCCACAACAACTCCAAGCACGGGCGGCGGACCAAGCGGGCGGACGCCAGCGACGGCGAGACGGACGCCGACTCAGGACTGTACCCCCCGATGCCCATGGCCACCCCCTGCATCAAGGCCATCAGCCCCGCGGAGGGCTGGACCAGCGGGGGCGCCACCGTCATCATCATCGGAGAGAACTTCTTCGACGGCCTGCAGGTCGTGTTCGGCACCATGCTGGTCTGGAGCGAACTCATCACCTCCCACGCCATCCGGGTGCAGACGCCGCCCAGGAACATCCCCGGCGTCGTGGAGGTGACGCTCTCCTACAAGTCCAAGCAGTTCTGCAAGGGGTCGCCGGGGCGGTTCGTGTACGTGTCGCTCACCGAGCCGACCATCGACTACGGCTTCCAGCGGCTGCAGAAGCTGATACCGAGGCACCCCGGCGACCCCGACAAGCTGCCCAAAGAGATCATCTTGAAGCGCGCCGCCGACCTGGCCGAGGCGCTGTACAGCATGCCGCGGAACTCGGCCGTGGCGCCCTCCAACGGCGTGGGCTCCGGGATGGCCTTCAACTCGTACTCGGGGCAGCTCGCCGTCAGCGTTCAGTCCGCCCAGTACGAGGACGAGGAGTGCGGCGGGCGCGGCCTCAGCAGCAGCGTCAGCCCCCGGGGCTACGTGTCGTCGGCCACCTCCACGCCGCAGTCCACCTCCGGGGGCGTGGCCGCCGGCGGGGGCGGCCCCGACTACCCGACGGCGGGGGCGGGCGAGGGGGCGGCGCCGCCCCCGTCCGCCCCGCAGCTCACCAGCCTGTCCTCGGGGGGCCTCTTCTCCAGCTCCGGCGACATTGTCTCCAGGATGGGCAGCCTGGTGCCCGCGCCGTTCAGCAACATGAACCCCTTCGGCCTGCCGACGTGCGCCTCACAGGGCTACAGCACGTCCCCCCTCAAGTAG
- Protein Sequence
- MSYNYTASLCRHRIVPSRREEREEEEEEEGEGEEEEGEKEKESLWFFLKFFLKCNQNCLKNAGNPRDMRRFQVTIASQIGVDGPLLAVSDNMFVHNNSKHGRRTKRADASDGETDADSGLYPPMPMATPCIKAISPAEGWTSGGATVIIIGENFFDGLQVVFGTMLVWSELITSHAIRVQTPPRNIPGVVEVTLSYKSKQFCKGSPGRFVYVSLTEPTIDYGFQRLQKLIPRHPGDPDKLPKEIILKRAADLAEALYSMPRNSAVAPSNGVGSGMAFNSYSGQLAVSVQSAQYEDEECGGRGLSSSVSPRGYVSSATSTPQSTSGGVAAGGGGPDYPTAGAGEGAAPPPSAPQLTSLSSGGLFSSSGDIVSRMGSLVPAPFSNMNPFGLPTCASQGYSTSPLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -