Mgen001656.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Megalopta genalis
Gene Symbol
nfxl1
Assembly
GCA_011865705.1
Location
NW:4365040-4370138[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 1.1 5e+03 -3.2 1.1 15 19 126 130 125 130 0.81
2 18 0.15 6.8e+02 -0.5 0.2 4 10 161 167 160 167 0.95
3 18 5.6e-08 0.00026 20.0 15.1 1 18 175 191 175 192 0.98
4 18 5.1e-09 2.4e-05 23.4 13.5 1 19 229 246 229 246 0.94
5 18 0.51 2.4e+03 -2.2 1.0 5 10 270 275 270 275 0.92
6 18 2.7e-05 0.12 11.5 10.8 1 18 281 299 281 300 0.95
7 18 6.5e-05 0.31 10.2 8.6 1 18 336 353 336 354 0.97
8 18 0.0021 9.8 5.4 7.0 1 12 388 399 388 399 0.94
9 18 1.9 8.7e+03 -4.0 1.3 6 10 409 413 409 413 0.96
10 18 2.1e-06 0.0098 15.0 15.0 1 18 419 436 419 437 0.91
11 18 0.0001 0.49 9.6 9.8 9 19 485 495 483 495 0.90
12 18 0.0025 12 5.1 6.2 1 12 505 515 505 515 0.95
13 18 0.86 4e+03 -2.9 5.8 14 18 547 551 547 552 0.89
14 18 0.00034 1.6 7.9 8.2 1 12 588 599 578 599 0.91
15 18 0.61 2.9e+03 -2.5 1.0 6 10 615 619 614 619 0.88
16 18 0.00017 0.79 8.9 15.8 3 19 628 644 627 644 0.92
17 18 2 9.4e+03 -6.6 3.4 9 13 650 654 650 654 0.71
18 18 0.00017 0.8 8.9 8.5 1 16 689 703 689 709 0.88

Sequence Information

Coding Sequence
ATGCAGAAGTTCAGACGAGCCCAAGCGcaaaacaaaattgcaattaataagCATTTAGAGGCAAATGCTTATTTAGAATCATCCAGCGAGGATGAAGATGATATACGAACAGAAGACATACAAAATGTAGTTGGCAAAGTTTTATCTGCCTATCAAGGAAGAGAGGCAGACACAGAAAAGACTTTGTCTTATTTAGTTAATTTGTTTCAATCTGGCAGTGCAGTGTGTTTAATATGtatttcaactgtaaaaaaGGCAGATGCGATCTGGAACTGTAGCAAATGCTTCGcttttttacatttatcttGTACCCTACATTGGATACAAGATAGTCTGAATGTAAAACGTGAGAAGGGTGTTGTACCTATTTGGGCATGtCCAAAATGTCGTATGGAATATGAGCAAGATGAAGTTCCTCGTAATTATAAATGTTTCTGCAAAAAAGTTATAGACCCTGTGTTCCAACCATGGAGTATACCACATTCATGTGGAGATGTATGCGGTAAACCCTTGCAACCAGAGTGTGGTCACAAATGCGTTTTACTTTGTCATCCTGGGCCATGTCCTCCGTGCGCGAAGACAGTATTGATGAAATGTTTTTGTGGTAAACAAGCACCTCAACAAAGAAGATGTAACGCCAAGAATTGGAGTTGTGGTACAGCATGTAATAAAAAGTACAAATCGTGCTCTCACACCTGCAAGCAACTATGCCATGCAGGAGATTGCCCTCCTTGCTCGGAATCATTATTACTTGAATGTCGCTGTAAGAGTAGCACAGAGATTAGGCAATGTTCTGAGGGCGCGTGGACTTGCGACAAACCTTGTCGCCGATCTCTATCTTGTAATATCCATGTTTGTCAGAGCACATGCCATCTACCTGGAGACTGCGGACAGTGTGCTTTGGAAAAGAATAGAACATGTCCTTGCGGCAAAAAGCGTTACGCGGTTTCTTGCAGTCAAGAACAATTACCCACGTGCGGAGACACGTGCGGCAAGCTGCTAGACTGCGGTTCACATTATTGTAATATGAGATGTCACATGGATCAATGTGGACAATGTTTAGAAGTAGTTACAAAATCCTGTCGATGCGGCAGCTACAAAAAAGAAGTCCCCTGCGGTAaagaatttcattgcaataagAAGTGCATGCAGATGCGCCTCTGCGGGAGGCACATGTGCAACAGGAAATGTTGCGATTGCTTGATCAAGAATACATTCaatatttgtgaaaaaatttGTGAGAACACTTTAAATTGCCGCAAACACAAATGTTCAGGCCCATGTCACAGTGGTCCTTGCTATCCTTGCGAGCGTACGGACGTTATTCAATGTAGATGCggatacaataaaataacagtACCATGCGGTACTATAAAGAGAGTGAAGCCTCCGCCGTGTAACAAATCGTGCAAAGTACCACCGATTTGTCATCATCCTAAGAGGGAAACTCATAAATGTCATCAGGGTCCATGTCCACCTTGTAAAAAGATTTGCGAGCTAGTATACAAACGATGCGGTCATTCTTGCGTTGCTGTTTGCCACACAAAAGTCTGggtaaaagtaaacaaaaacgaTGTGAAAGCACAACCTACGGGACCATGGGATATACAGAAAGAAACGAAGCAGTTAAAAACGTTACCATGTCCGCCTTGTGAAGTGTCAGTACAGGTCACATGTGTGGGAGGTCACGAAACACGCCCGTGGCCTTGTCACATGGCACGGCCTACATCTTGTGGAAGACTTTGCGGAAGACTGTTACCTTGTACCAATCATACTTGTGAATTAGTTTGTCACAAGGTATTATCATCCGAGGGTAGCAAGAATGCTACTCCATGCATGGATTGTGAGAAGCCATGCGTGTTCCCGCGACCGCAGGGTTGCACGCATTCTTGCTCCAAACCATGTCACCCAGCACCGTGTGATCCTTGTAAGCAATTAGTTAAAATTCCATGTCATTGTGGTATAGTCACTTTATACAGAAGATGCGTCGAGCTAACATCGGCCACAGCAGAGGAACGCAACGATCTGCTGAAATGTGGGAATCAGTGCcctaaaaatTATCCTTGCGGTCATCGATGTATGTATGATTGCCATCTCGGCGAATGTAAAAATGAGAATGAATGCAACAAGAAAGTGAAGTTATTCTGTCCATGTAAACGTATCAAAAAAGATTTCATATGCTCGTTGGTACAAAAAGAACAAATTCGATTGCAATGCGACGATGTTTGCAAGAAGTTAAAGATAGAGAAAAGTCTGGCAGAAGCAGCGTTGCTGGAGCAGAAACGGCAAGCTGAAGAAATACGCAATCAAGAAGAgatcgaaaaattcgaaaggaAATTTAGACCTCGTCGGAAAGGAAGAGACAAGCTCGATAAGAAACAATCGCGAAAGGAAACAAGTAGTCATTATTGGAAATATTGGATTTTAGCGATATTATTGTGTACAGTGGGTATTGCGATATATTACGTGAACATTCTAAGCGAACTAGCGTGA
Protein Sequence
MQKFRRAQAQNKIAINKHLEANAYLESSSEDEDDIRTEDIQNVVGKVLSAYQGREADTEKTLSYLVNLFQSGSAVCLICISTVKKADAIWNCSKCFAFLHLSCTLHWIQDSLNVKREKGVVPIWACPKCRMEYEQDEVPRNYKCFCKKVIDPVFQPWSIPHSCGDVCGKPLQPECGHKCVLLCHPGPCPPCAKTVLMKCFCGKQAPQQRRCNAKNWSCGTACNKKYKSCSHTCKQLCHAGDCPPCSESLLLECRCKSSTEIRQCSEGAWTCDKPCRRSLSCNIHVCQSTCHLPGDCGQCALEKNRTCPCGKKRYAVSCSQEQLPTCGDTCGKLLDCGSHYCNMRCHMDQCGQCLEVVTKSCRCGSYKKEVPCGKEFHCNKKCMQMRLCGRHMCNRKCCDCLIKNTFNICEKICENTLNCRKHKCSGPCHSGPCYPCERTDVIQCRCGYNKITVPCGTIKRVKPPPCNKSCKVPPICHHPKRETHKCHQGPCPPCKKICELVYKRCGHSCVAVCHTKVWVKVNKNDVKAQPTGPWDIQKETKQLKTLPCPPCEVSVQVTCVGGHETRPWPCHMARPTSCGRLCGRLLPCTNHTCELVCHKVLSSEGSKNATPCMDCEKPCVFPRPQGCTHSCSKPCHPAPCDPCKQLVKIPCHCGIVTLYRRCVELTSATAEERNDLLKCGNQCPKNYPCGHRCMYDCHLGECKNENECNKKVKLFCPCKRIKKDFICSLVQKEQIRLQCDDVCKKLKIEKSLAEAALLEQKRQAEEIRNQEEIEKFERKFRPRRKGRDKLDKKQSRKETSSHYWKYWILAILLCTVGIAIYYVNILSELA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00865697;
90% Identity
iTF_00183647;
80% Identity
-