Basic Information

Insect: Megalopta genalis
Gene Symbol: -
Assembly: GCA_011865705.1
Location: NW:1213220-1228878[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.016 0.83 9.4 0.4 1 23 919 941 919 941 0.97

2 12 0.011 0.56 9.9 0.2 2 23 1037 1058 1037 1058 0.95

3 12 1.1 56 3.6 2.0 3 21 1206 1224 1205 1225 0.96

4 12 0.046 2.5 7.9 0.1 3 23 1246 1266 1244 1266 0.95

5 12 4.3 2.3e+02 1.7 0.3 1 10 1277 1286 1277 1288 0.90

6 12 0.038 2 8.2 1.0 1 20 1350 1369 1350 1371 0.93

7 12 0.025 1.3 8.7 0.3 1 23 1398 1421 1398 1421 0.96

8 12 0.00022 0.012 15.2 0.8 1 23 1470 1492 1470 1492 0.97

9 12 5 2.7e+02 1.5 0.8 1 23 1514 1536 1514 1536 0.91

10 12 0.00029 0.016 14.8 0.7 1 23 1727 1749 1727 1749 0.98

11 12 0.21 11 5.8 0.1 3 23 2134 2157 2133 2157 0.92

12 12 0.017 0.89 9.3 0.2 1 23 2159 2181 2159 2181 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.016	0.83	9.4	0.4	1	23	919	941	919	941	0.97
2	12	0.011	0.56	9.9	0.2	2	23	1037	1058	1037	1058	0.95
3	12	1.1	56	3.6	2.0	3	21	1206	1224	1205	1225	0.96
4	12	0.046	2.5	7.9	0.1	3	23	1246	1266	1244	1266	0.95
5	12	4.3	2.3e+02	1.7	0.3	1	10	1277	1286	1277	1288	0.90
6	12	0.038	2	8.2	1.0	1	20	1350	1369	1350	1371	0.93
7	12	0.025	1.3	8.7	0.3	1	23	1398	1421	1398	1421	0.96
8	12	0.00022	0.012	15.2	0.8	1	23	1470	1492	1470	1492	0.97
9	12	5	2.7e+02	1.5	0.8	1	23	1514	1536	1514	1536	0.91
10	12	0.00029	0.016	14.8	0.7	1	23	1727	1749	1727	1749	0.98
11	12	0.21	11	5.8	0.1	3	23	2134	2157	2133	2157	0.92
12	12	0.017	0.89	9.3	0.2	1	23	2159	2181	2159	2181	0.97

Sequence Information

Coding Sequence: ATGATGAATACTAATGAAGAACTGATGAGCACAGATTTGAATGCACTTGATTGTTCGTCTAAAGATACAATGGATATAGAATCAGCGAtacaaaatcctaaaaatcttaGACGTCGAAGATtacgatataaattatatgaattaaaaaagaattctggACTTGAAAGTGTGAATCAGTTACCAAATGGAAGTAATTATTTAAGTGAATTCTGCAAATTAGTGTGTAAACCAGTGTCCGTGAGACTCAGAAGATTAACAGACTCAGACTTGAAGAAACTGACTACAAAAGTGTCATCTAAAATTCCATCTGTTAGAAGGGCTCCGTTGGATAGATCACTTTATAAGTTTTAtggatataaaacaaaaaaaaggaaaaatactaTTAGTATAGAAGAACACGGTAAACAAATCCAGAAAAGAATAaagagtaataaaattaataaaaatgtagataATAGTGTTGATGAGaatgtacagaaaaatgttaagaaaaaaGTAGCACGAAATAGACCTAAGCGTTTATATAAAAAACGTCAGTTAAATAATACAGTGACTTCCAAAGTACAAAAATCTAGCAACCATGAACAACGTAAAgaagatttatttaaaactaTTAAGCAGCCAATTATAGCATTAAATAGAATAGATGAAGTAATTAATAAGTTAGCACAATCATTTGCAAGAGTAACTTCGAATAAACAATGCTATACATTGGAACAGCCAGCAGTCAAACAATATATAGCTGTGACTCAAACTGAGGAAATTGGGTTGATGTCAGAACCTTTATTGATAAGCACCAATGAGAATGATTGTCTTCAGAATGACGAAGTTGCTGATAATATTAGTGAAACAGACAGTGATGACATATCCCAAATTAAAAGcaaatttaaaaggaaaaagagaatcTTTGATGATTCCAATAGTGATGAATCTGATAATGATGTATGGTatgaaacgaaaaaattaaaattgtgtttGTCAAAGAAGGAAACTGCAACGACTTCCGATAAATATattgaagagaaagaaaatattaacacttttaaTCTAACATCTAAAGACTTAACATTTCAGGCTGGAACATCTCGAGAATCAAATGTTTCTTGTAAATTAAATGTACTTCCTAGCGAAGAAAATATAGAAGCAGACACTGCAAAAGGAAAATCACTTGTTGATAATGGAAAAGTAAATGTTGAGAATAATGAAGTAAATATTGAGGAAGGAGATCTGGATATTCGGAATGCAGAAATAAGTAACAGGAAAGAAGGAATGGATCTTGAGAACTTAAAAGTTGTTGAAGTGCAGGAAAAAGTAAATGATGAAAATGAACATGTGGATGTTGAAAATGAAGATATTGATGTTGAAAATGAAGGTATAGGTGTCGACAACAAAGGTATAGATGTCGAAAACGAAGGTATAGATGTCGAAAACGAAGGTGTAGATATTGAAAACAAAGGTGTAGATGTCGAAAATGAAGGTATAGATGTCGAAAACGAAGGTGTAGATGTCGAAAACGAAGGTGTAGATGTCGAAAATGAAGGTGTAGATGTCGAAAACGAAGGTGTAGATGTCGAAAGCAAAGGtgtaaatgttgaaaatgaaGGAATAAATGTCAAAAACAAAGGTGCGGATGTTCAAAATCAAGGTGTAGGTGTTAAAAATGAAGATGTAGATGTTGAGAAAGGAGATCTAGACATTCAAAATGTAAAAGCAAATAACAGAAACGAAGAAATGGATCTTGAGAACATAAAGGATGTTGAAGTACAGGAGGAAGTTGATGTTGAAAATGAAGAAGCAGGTGTTCAAAGTCAACAAGTTGATGTTAAGACTGAAAATGGAAAGTATAATTTGGATGTATCAAAGAATGAAATTCAAGAAAGTATTGAGAGCCCCACAGAAGACTCTGTTTCCAGCTTGTTATCTTCAGAACTACATTTTGAGCATACTCCAAAATGTAGTACATGTTCTGTAGATGAATTCGTTTATACAAATTCAGAGATGGAGCAACATATACTGAAACCACTATTATCTGAAAATcagttaatacaaaaatacaagtTGTATAAACAGCCGAAGATTTTATTGGTGGATTGTCAACGTATCAAAAAACCATCTGGTAATACATGTTCAGACATGAAAGTTGAAAAACTAACTGAGAAGAACATAAATATTTTaccaaattgtaattttacacATATGACtaaaaattatctaatttcAGGCATGTCTTGTTTAAAGAATATGATTATTAAATCAAAACTTGACAAACCTGTTTGTTCACACAAGATTATAAGAGGGAGGAAAGGAAGTGTAGAAAGAGAACATGTTTCTAGTAAATCCATGACCTCAAAGAAAgggaaaatatacaaaatgatatCCGACAGCATCATTGGACATGGTATTGTATCTTCACATCTTCCAAAACAATCTATCAAAGAATTAGACACACTCTCTTCTACTGCTCCACAAAAGCCTAGTAAATTATTCCTTAAATCCACAGAAAGTACAGCTAAGAAAGCAAAATTTAATACTTCTGAAACTATTGACATAAAAACTAATGTTGCAAAACAACTTCATGTTTTAGGTCACACAAGTTCTCCAAACATAGATCAATTGGAAGatataagcattggcaatcatAAGACAGATGGAGAGAAAGCCATGTTGTTATGGGTTCCCATAACTTCCCCAACAAAACATAAAAAACTTGCAGAGAAGAAAGATACTATCAAACCGAAGGAAGTTTCCAGTACTTATAAATGCATTGTTTGTGATCTTTTCTTCGAGGATTATTCTGTTTTGCAACAACATTTAAGTACGCACACAAAGCAAACCATGCAAAGTCAGCAAAAGGCTATAGTTACAGAGAAGCATGCTGATGCTAAAGAAAAATCACAATCTCAACTTTCCACACTAGAAAGAAGAGACCTACAACAGTTTCTTATTGAAGATAGCACTTCTCAAGTTGCATCTTCATGTAGCCCATGCATCAATGCAGATCAAAAAGAGTCGCAGCACATAAGTccacagaaaaaaataaaggacGCGAAATCTAAACAGAGTTTGTCAAAGAAGCACAAACTTTGTAAACCGTCTAAACTGACGAACGAGTGTAGCGTATGTTTCCATGAGTTTGCAACAAGAGCAGATTTGGCAGCTCATATTTTCTTGCACACGGAAACTGAACTGAAAGAAGCATATAAAGTTGCAAAACTAAATTTGCAGAAGAATGACATTAAGATTGCAGCATCAGAAACTCAGAAGACAAAGGATTGTGTGGCAAAATCTACTCATTCAGTTGAAAAATCTTCAATGAACTCCAATGAGAGCAACACAAGTAGTAGTTTAGAAGCATCAACTATGCAAAAATGCATGGAACATGTACCAAAAGATGTTAAATTTATAGATGAAAAACTAAATGACATtccaaaaatatgcaaattaacCCATGGAGAAAGTAATTCTAATGGTCAAACTTCGTCTGTGACAAATAATGTAGCTAAAGTAAAAACGAGTAAAAAAAGCGGGACGAATAAAACATTGTTTACAATATGTCAGTGCCATAACACAGCAGACACCAACTTTAGTTGTTTACAAATTGAGATAGTTCTCCTATGTCACACTTGTGGAGTATTATTTCGAAGCATGGAGTGTTTCGAGACTCATTATCGTCTTCCTGAGTATTCGGCTTGTAATCAGAATCGGCCAGAGAGCGGTCGATCTCCAAATTTATTCTGTGCTACCTGCGGAATGATATTTAGCTCGGTTCAAGATGTGCGTCAACATCTAGAGATACATGTACGTTATAAGAAAGACTGCACAATGGACTTTCGTTGCAACATTTGCAAAGTGATGTTCATTGGAATCGGACCTCTCTTTTATCGTCATTGGTTAAACCATACAAAGGATCCATTCTGGGTAGCCAGTGAACAATCATTTCCCAAAATTTCTGTGTTGAACTTAAAATCCAAGAAGCTGGGTGTAGCATCTAATCCAGGTGAATTTGTTATCTATAAATGGCTAGACAATTACATTCATGTTGCAGAACATGTTTGTTTGAACTGCAAAATGGCTTTCAATAAAGAAGACCACTTAAAGGAACACGAACAGAATTGTAAAGCAGTTAGTGTGTTAAAAAGTCCGAATGCGAAGTCCAATGTTACTACAGACGTGATGCTACTAaagttgcattttatttgtagtCTCTGTGATAGCACTATTCCAAACAAAGCAAAGTTGTATGCACATATGAAGAACACGCATAAATTCGCCACAGATCCCCAATTTGTATGTGTGTCCCTTACAAATATGGCGAAAACGTTCATTTGCAATGTTTGTATGGCGATCAGTGCAAATATCGATAAGTTCAACGAGCACTGGTTCGATCACTATGTGAGCCAACCATGTTTCGATTGTCCATATTGTGAGAAAACTAGCGAGAGCTTGGATACTTTCAAAAGACACATCAAGGAGCATGTGACAACACCAAATGACGACATAATTACGATATCTTGTAAGGTACACTATCGCAAAGTTAAATACCATTGCAAACCATGCTATATTGGTTTCAACTCAGAGAAATTGTTAAACGAGCACAATGTTATACATAACACAAGTAGTATAAATAATGGAAATAGTAACGAAGCGACGACTCCGGAGAATTCTAGATTATGTGAAAAACTGATAGATAAGGTATCTGCTAAGGAAGAAAAAGACACAGGGGAAGAAGCTGATAAAGGTGATCAATCGACAGAGGATCAGGCTGTTAAAGAAGATCACGTATCAGAGGATCAGATCGACAAAGAAGATCAAGCTACGAAAGAGAAGACTGATACAAGAAATCAAGTAACACAGGAACAAACTACACAGTGTTCAAAGTCTAAGGCTGACATTGAAAAGGAGAGATTAATCAATATATTGGAAGGCAACGAGGAGGAAGACTCCGAAAATGAGTTGGTAATAGACTTGGCAGATCGTACAGAGTTACAGAACGAGTTAGCAGTAACAGACAGATCTAAAGAAAAGCAAGTTGTAACTACCGGCACGGTAGGTACGTTAAACCCTGCTTCACAATCTACTCCACCTCCAAACAGACCAATGGAGGCAAACAATTCAAAAAGGCATGGATTTCTACGTGTGAAAAAATTAGAAGATCTTCTGGAAGATGTAAGCTCCTTGCATGAATGCCAGGTGTGCAAGTATAGTTATGGATCTGCTGAAGAACTTCAGCAACATCTCTTGACTCACGCAGTTCAAGAACAAGCGAAAGTATCTTCTGAGGAGGCTTCCCAGCAACTTGCAATATCCACCGAACAGAAAAAGCCTCTGCAGAATGAAGGGAGACTTACAGTGACTGCACGGACTGTCCAGATTCCAGTCATGTCCAATCTCTATCCGGGAACAGCGACCAACGTGAAATTGTTAACTGCCAAGCATAATTCTCCTGTTTCTTCTTCACAGGCTTCCGTAAAAACGGCGTACCATAAGAATCTGCCGGCTTGCAATATTGTTCGTAAATTAACTGTACCACGTTCCAGTAACCAAACGAGTGGTAAGGTTTCCACGGCAGTGGAAAGAGGTTCTTCCAATGCGCAGAGTCTTCAAACGGCGCTCAGAGTTGATTCTAATACTGGAAACCAGCAGGGTAAAACGAATTCGTATATACCTTATAGAATGAATGTCCCCGTAAGGGCGAACATAGCTACTGCTATGAGCAAGAACAAGTACCTGAATCAACAAGCAGGTTACAAAACTTATCCTAAGCCCACCCCACCACCCGTCTCGACTGTATACACGTATTCCCAAGACGAAAATGGAAAGATCGAAGTCGCTGCAAGTCATAGCATCGGTAGTGCTGTAGCGAACAACAATGCGAACTACGACAATGCGAACTACACGAACGGCGCCCACAACTATATCCAGACCTCGCACAGCGTTCAGAACCAAGCCACGACGAATAATTCTCCCACAacgatgtattattattatcccaaTTCTAATACTGCTTACGCTGGGAATGCTCAGGGGCCCGTACATACTCAGCAAATGGTGCAGCAGGTACCCAATCATACACTAGCGAGAAACGTACCACCTTCTTTTTATTGTAAGAATCCTACATCAGGTGGTATGTCGATAGTAATCAATCAAAATGCGCCCACCGTGCAAGGTTTGCCAGCAGTGGACGTGAGACAGCAACAAGAACACCAACAACATATGTATCAGCCAGTTTATAGCAATCCAGTGGTTTCGGTAGACCCTTATGTAGCGCAGTCACAGAAAATTCTTGATTACACCGGAACCAATGAGATTTATCAGGCAACACCGAATGAGTACACAGAGCCGGTCAATGAAAATGTTTCCAGCTGCAATGCGTCGATGCAAACCGTATCAACCAATTTTTGCGCCTACTGTCCACTAGCCATTTCGTTTGTGAGTCAAGACTCATTCGATAGACATATGAGCGTTTACCATAATTTTGTTTGCGAGATTTGCGCTTCGTCGTTCTACCGTATCGAGGACTTGAGGGTCCATAACATGAAACACGTGTTGAACTGA
Protein Sequence: MMNTNEELMSTDLNALDCSSKDTMDIESAIQNPKNLRRRRLRYKLYELKKNSGLESVNQLPNGSNYLSEFCKLVCKPVSVRLRRLTDSDLKKLTTKVSSKIPSVRRAPLDRSLYKFYGYKTKKRKNTISIEEHGKQIQKRIKSNKINKNVDNSVDENVQKNVKKKVARNRPKRLYKKRQLNNTVTSKVQKSSNHEQRKEDLFKTIKQPIIALNRIDEVINKLAQSFARVTSNKQCYTLEQPAVKQYIAVTQTEEIGLMSEPLLISTNENDCLQNDEVADNISETDSDDISQIKSKFKRKKRIFDDSNSDESDNDVWYETKKLKLCLSKKETATTSDKYIEEKENINTFNLTSKDLTFQAGTSRESNVSCKLNVLPSEENIEADTAKGKSLVDNGKVNVENNEVNIEEGDLDIRNAEISNRKEGMDLENLKVVEVQEKVNDENEHVDVENEDIDVENEGIGVDNKGIDVENEGIDVENEGVDIENKGVDVENEGIDVENEGVDVENEGVDVENEGVDVENEGVDVESKGVNVENEGINVKNKGADVQNQGVGVKNEDVDVEKGDLDIQNVKANNRNEEMDLENIKDVEVQEEVDVENEEAGVQSQQVDVKTENGKYNLDVSKNEIQESIESPTEDSVSSLLSSELHFEHTPKCSTCSVDEFVYTNSEMEQHILKPLLSENQLIQKYKLYKQPKILLVDCQRIKKPSGNTCSDMKVEKLTEKNINILPNCNFTHMTKNYLISGMSCLKNMIIKSKLDKPVCSHKIIRGRKGSVEREHVSSKSMTSKKGKIYKMISDSIIGHGIVSSHLPKQSIKELDTLSSTAPQKPSKLFLKSTESTAKKAKFNTSETIDIKTNVAKQLHVLGHTSSPNIDQLEDISIGNHKTDGEKAMLLWVPITSPTKHKKLAEKKDTIKPKEVSSTYKCIVCDLFFEDYSVLQQHLSTHTKQTMQSQQKAIVTEKHADAKEKSQSQLSTLERRDLQQFLIEDSTSQVASSCSPCINADQKESQHISPQKKIKDAKSKQSLSKKHKLCKPSKLTNECSVCFHEFATRADLAAHIFLHTETELKEAYKVAKLNLQKNDIKIAASETQKTKDCVAKSTHSVEKSSMNSNESNTSSSLEASTMQKCMEHVPKDVKFIDEKLNDIPKICKLTHGESNSNGQTSSVTNNVAKVKTSKKSGTNKTLFTICQCHNTADTNFSCLQIEIVLLCHTCGVLFRSMECFETHYRLPEYSACNQNRPESGRSPNLFCATCGMIFSSVQDVRQHLEIHVRYKKDCTMDFRCNICKVMFIGIGPLFYRHWLNHTKDPFWVASEQSFPKISVLNLKSKKLGVASNPGEFVIYKWLDNYIHVAEHVCLNCKMAFNKEDHLKEHEQNCKAVSVLKSPNAKSNVTTDVMLLKLHFICSLCDSTIPNKAKLYAHMKNTHKFATDPQFVCVSLTNMAKTFICNVCMAISANIDKFNEHWFDHYVSQPCFDCPYCEKTSESLDTFKRHIKEHVTTPNDDIITISCKVHYRKVKYHCKPCYIGFNSEKLLNEHNVIHNTSSINNGNSNEATTPENSRLCEKLIDKVSAKEEKDTGEEADKGDQSTEDQAVKEDHVSEDQIDKEDQATKEKTDTRNQVTQEQTTQCSKSKADIEKERLINILEGNEEEDSENELVIDLADRTELQNELAVTDRSKEKQVVTTGTVGTLNPASQSTPPPNRPMEANNSKRHGFLRVKKLEDLLEDVSSLHECQVCKYSYGSAEELQQHLLTHAVQEQAKVSSEEASQQLAISTEQKKPLQNEGRLTVTARTVQIPVMSNLYPGTATNVKLLTAKHNSPVSSSQASVKTAYHKNLPACNIVRKLTVPRSSNQTSGKVSTAVERGSSNAQSLQTALRVDSNTGNQQGKTNSYIPYRMNVPVRANIATAMSKNKYLNQQAGYKTYPKPTPPPVSTVYTYSQDENGKIEVAASHSIGSAVANNNANYDNANYTNGAHNYIQTSHSVQNQATTNNSPTTMYYYYPNSNTAYAGNAQGPVHTQQMVQQVPNHTLARNVPPSFYCKNPTSGGMSIVINQNAPTVQGLPAVDVRQQQEHQQHMYQPVYSNPVVSVDPYVAQSQKILDYTGTNEIYQATPNEYTEPVNENVSSCNASMQTVSTNFCAYCPLAISFVSQDSFDRHMSVYHNFVCEICASSFYRIEDLRVHNMKHVLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -