Mgen001536.1
Basic Information
- Insect
- Megalopta genalis
- Gene Symbol
- -
- Assembly
- GCA_011865705.1
- Location
- NW:79741-96794[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.8e-13 8.2e-10 37.3 0.0 1 39 496 535 496 539 0.90 2 4 2.7e-12 2.5e-09 35.8 0.1 2 39 551 588 550 591 0.94 3 4 9.8e-19 9.2e-16 56.4 0.0 2 45 606 650 605 650 0.97 4 4 1.1e-18 1.1e-15 56.2 0.1 1 42 657 699 657 700 0.97
Sequence Information
- Coding Sequence
- ATGCCGTGCGCCCTCAGCACGGAACGCCGAATGCCATTTCACTTTCGTTGGGCTTCGCCGCGTAGGAGATCGGGCCCTGCCAGGAATTATCCTCTCGTTCTACGTGGTCGTAACCTCCTCGTACACGGTTTCGTCTGGCTTTTTCACGACGTCGACTCTACTAACGCCGCCGACACCAGATCGTTTCCTCGTCGTGACTTCTgtgcctcttcttcttctcctccttctcctccttctcctcctccttcttctttctcttccttcacCTCCTCCTCCTTGTCCACCTCTTCtatttcctcctcctcctcctcctcctcctccttcttcttcctcttcttcttcttagcctcttccttctcttcttcCTGCGCCTCTTCCTCATTTTCTTgcttccgccgccgccgccgcacttCCTTCGCCCGCCTTTCTTCCATCTCGCCACCCTCTGCttcctctttcctctctttccgcCGCTTTTCCTTTCCGTCCTGCTACTACaacaccgtcgtcgtcgtcgtcgtcgtcgccttCACCGTAACTTCCCGTCGCCtcctcctctccctccccctgTCCGCCGCCTCGTCCCTTCGCGTTTCCCCGTCTTTCTCGTACGTCTCCGCTCTCTCGACGAGGGACTGCTCGCCCACGGACCATCGTAGCCAGTCGCTATTGAAAACGGCCGATCAGCTGAAGATCAAGGGGCTGTGCGAGGTGCCCGAGAGCAGGGACGGACCGCCGTCGGTGAGTTTGAGCTCGCCGCCGCGAGAGCCGGGCACTCCCAGGATAAATTTCAGCAAGCTAAAGAGGCGGTACAAACGGGCGAGGACcacgttcgagcctcgcgcgacGGACTCGAGGCACTACGACCGATACAAAGAGGAGGAATCGAACGGGAATTACAATCCGGAGAACAAAGAGAATCACAGGGACTGGCAGACCGAAGATGAAGATTGCACGGAGGGCGCAACAGGAACAGTAGTCTTGGAAACCTGCCAACGGaccaataacaataacaacaacaacaataacaacggtAACGGTgcgaacaacaataataacgGTGACATGTTCTGTCATACAGGGCTCGGACACTATGGTCACCATCCAGATCCTGGGGAAGTCGACCTGCCCCCAGAGACCCAACCCACCCCACCCAGCGCAACATTGGTCGGCACTACGATCACTCACCTGAGGGACCCGGATCACCATTCCACAGAGATACAGAACTGCGACAGTGTGAAGATAAAGTTCGAAACGTTGCACACGATGGACTCGTCGGACACGATCGACATCGACAGCCACATGTCGGACCGGGCGAGCGTCAGTTCGAAGAACGCGGCGGACAGTGACAATATGATGATGATCACGCCGGAGCTCCTCGGTTTAATGCCCTCTGGAAGCTCCGTCCACTCGGATTCCGGCGAAAACAACTCGAGGGGACACTCCGGCCAATCGAGCTCCCATCATCACGGATCGAAGTCGTGGACCCAGGAAGACATGGACGCAGCTTTGGAAGCTCTGAGGAACCACGACATGAGCTTGACGAAAGCCTCCGCAACGTTCGGTATACCGTCGACGACGTTATGGCAAAGAGCGCACCGATTAGGCATCGACACGCCAAAAAAGGATGGACCAACGAAGTCGTGGAGCGACGAGAGCCTGAACAACGCGCTTGAAGCGCTAAGAACTGGCACGATCTCTGCCAACAAGGCTTCGAAGGCATTCGGCATACCTTCCAGCACGTTGTACAAAATAGCGAGGCGGGAGGGCATCAGATTGGCCGCGCCCTTCAACGCCAGTCCGACTACTTGGTCGCCTGCCGATCTGGACCGCGCTTTAGAAGCAATAAGGTCCGGTCAAACGTCTGTACAGAGAGCTTCGACCGAATTCGGTATTCCAACGGGCACCTTGTACGGTAGATGTAAAAGGGAAGGCATCGAATTGAGCAGAAGCAATCCCACGCCGTGGAGCGAGGATGCTATGACCGAGGCACTCGAAGCCGTCAGATTGGGTCACATGAGCATCAATCAAGCAGCCATTCACTATAATTTACCTTACTCGTCGCTGTACGGTCGGTTCAAGAGGGGGAAATACGAAGAACCTTCGGTCGGTGATCTGTCGCAAGATGGTAGCAATCCGCATTTCCATCAGAGCCCGAATCAGAATCATTCGTCAGCCGTTCCGGATCAAATGCCCTACCAAGGCAGCTGA
- Protein Sequence
- MPCALSTERRMPFHFRWASPRRRSGPARNYPLVLRGRNLLVHGFVWLFHDVDSTNAADTRSFPRRDFCASSSSPPSPPSPPPSSFSSFTSSSLSTSSISSSSSSSSSFFFLFFFLASSFSSSCASSSFSCFRRRRRTSFARLSSISPPSASSFLSFRRFSFPSCYYNTVVVVVVVAFTVTSRRLLLSLPLSAASSLRVSPSFSYVSALSTRDCSPTDHRSQSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRINFSKLKRRYKRARTTFEPRATDSRHYDRYKEEESNGNYNPENKENHRDWQTEDEDCTEGATGTVVLETCQRTNNNNNNNNNNGNGANNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPSVGDLSQDGSNPHFHQSPNQNHSSAVPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -