Basic Information

Gene Symbol
ct
Assembly
GCA_011865705.1
Location
NW:4902-167916[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6e-28 2.8e-24 84.0 0.0 2 72 584 655 583 660 0.95
2 3 1.1e-32 5.1e-29 99.2 0.0 2 77 993 1069 992 1071 0.96
3 3 6e-31 2.8e-27 93.6 0.0 3 75 1225 1298 1223 1302 0.95

Sequence Information

Coding Sequence
ATGCAGGCCTCTGCGGAGGCCAACTCGCTGGACATTCAGGCCATGCAGTCCATGGACTGGCTGTTCAAGAAGGAGCGTATATACCTGCTCGCCCAGTTCTGGCAACAGAGGGCAACGTTAGCGGAGAAGGAAGTTTCCGCGTTAAAGGAGCAACTAGCCGCGTTAAAGGAGCAACTAGCCGCGGCAAACGATGGGAATTCGAAGACTGAGGGACACCAATTGTCTCAGACTATACAGGGAAGTGATCAGCAGCAGGTTCACGATGCCAGCAATCCCAGGAGAACGCCAAACAGCAACCTGGAGCAGGAACTGCAAGCGAAAGACAAAGAGATCAGCCAGCTGGTCGAGGAAGTGTCCAGGTTACAACAGAGCCTGCAACGTCTTCAAGAGACCAGCGCACAGGGTGCGGCGCGGCTCGAGGAGGAGCTCGATGCCCGCAGACAACACATCAGCAGACTGGAGAGCAAACTCGAACGACAGAGGGACTATGATGACCTGAAGCGGGAGATCAACGCGCTCAGATCGGTCGATCTCTCGCAGATCCCGACCGGCGAGCCGGGCAAGAGCCTCGAGCACCTCCTAATGGAGCGCTCGAAGGCGCTTCAGCAAACAGAGAGCTTGAAACCGTCGTCCAACACCCCGGACGCACTCGGTGGACTATCGTCACCCCTGCAGCGCGCCTCCACCGCCTCGCCCCACGGGGTCGGTGGTGTTCCGCCTTCGTCCCATGTGTCCTCCCAGCAACCACCACCGCCGCCCCCAGCAGCAGTCACCCTTCCGCCGCGATCCACTCCTACACCGTCTTCAGCGACCTCGACCACGTCCAGTCTCCTGTTCCCACCCCCTCTTCAGAATGTCGAGACCTTCGGCTCCTTCCTCGGCGAGGAGATCGTCGCCAACTGGAGGCGGACGTTGGAGAGGTCCATCATGaatcagcagcagcagcagcaacagcaacagcaacaacaacaacaacagcagcagcaacaacaacagcagcagcagcaacaacaacaacaacaacaccagcaccagcaacaacagcaccaacagcaacagcagcaccaACAGCAACAGCACCAACAGCAACAGcatcaacagcaacaacaaacgACGGCGTTGAGCCAATTgtcgcaacaacaacaacagctaCAACAAGCTCAGCCGCTGATTGGCCTGCATCCGCCAACGAATACCAGCAGCATGAACCATCTTCCATCGCCTACGGATCCGTCGTCCAGCTCGAACACCCCGGCCAAGTCGAATACTCCTCTAGGAACCACTCCACTGAGTTGCCTTGACGCGGCCGAGAAGGCGCCCACGCCAGTCTCCGGCCACGAAACGCCCGCGCCGCCCACGCCGTCGTCCACCACCGCGTTAACATCACCCCCAAGCTTTCAGCCACCCACCACGATCATCGAGACCGCCTCCTCGGCCTCCGTGAACGGCGGCAGCGTGATCCCCGCCGTCCCGACGGCTCCGCCGCCAAAGAGTCCGGCCGACCAGGAGTCCTGtcataacaacaacaacagccaCCACCTGGCGAACAATAATATCGGCGGCCTGAGCGTGTTGGACACTCTGAAGAGCCCGTTTCGCTTCGACGACAGGACGCACCCGTTCAGATTCGGCGACGAGTTCGGCGCCGCCGGCATGGCCGGCCGTCTCGGCGAGTCTTTAATACCGAAAGGCGATCCCATGGAGGCCAGGCTGCAGGAGATGCTGCGTTACAACATGGACAAGTACGCCTCGCAGAACCTCGACACCCTGCATATAGCCAGGAGGGTCCGCGAGCTGCTGTCGATACACAACATCGGCCAAAGGCTGTTCGCCAAGTACGTGCTAGGGCTCAGCCAGGGAACGGTCAGCGAGCTGCTGAGCAAACCGAAGCCCTGGGACAAACTGACGGAAAAAGGCCGCGACAGCTACCGAAAGATGCACGGCTGGGCTTGCGACGAGAACGCTGTTATGCTGCTGAAATCCCTGATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGAATGCCAGCGTTCGCGCGCGGACCACAGGAAGGTGGTCCGCCGGAAATGAGTGACGAAAGGTTGGCGCATATCCTCTCGGAATCTGGCCACCTACAGATGAGGGGCGAGCACGAGGTGTCGAACGACGCGGACAGCAAAAGCCCGAGTAGGATCGGCTGTCCGAGCCCGTTCAATAAAGACAGGCTCGACAGCCAGAACAGGAGACTGAAGAAATACGAGAACGATGACATTCCGCAGGAAAAGGTAGTCAGGATCTACCAGGAGGAGCTGGCCAAGCTAATGGGCAGAAGGGTGGAGGATCTCCGTGGGCCCCGAGAATTCTCTTCCAGCGCGATGTTTCCACACTTTTTCAGTGGCGGCCAGGGTAGTCTTCAAGGTATGGAGCGCACGCAGGACGACATCCGGATGGCGTTGGACGCGTACCATCGCGAGCTACAGAAGCTGAACCCCACACCGGGTCAGAACCCGTCGCTGACAGGATTGCCGGGACTACCAGGGCTGCCGGGACTCCTGGCGCTTCAGCAACAGGCTCTTCAGCAACACCACCTGGCGACGAACGGTGGTGGAGTCCAGGATCTGAGCCTCGGCAAGATCGACCCTAGAAATAAGATGATCAACGGTGTCTccgaagaggagaaagagaagatgGAGGAGGCTATAAGACACGCGGGCAGCGCGTTCTCGTTGGTCAGGCCTAAACAGGAGACCACGGCGCCGCAATCGACCCCCAGCGGTTCCAGCGCGAGCTCTCCGCTCGGGAATTCCATTCTTCCACCTGCAATGACTCCCAGCGAGGAATTCTCTGGGGCGGCGGCCGCTAGTCCTCTGCAAAGGATGGCGTCCATCACGAATAGTCTGATCAGTCAACCGTCCACGCCTACCCATCACTCGGCCAACCAGAGGCCGCTGAAAGCTGTACTGCCACCGATCACCCAGCAACAGTTCGACATGTACAATAACTTGAATACCGAGGACATCGTCAAGAGAGTTAAGGAACAACTGTCCCAATACTCGATTTCCCAGCGCCTGTTCGGCGAGTCCGTGCTGGGCCTGTCCCAGGGATCCGTCTCCGATCTGCTAGCACGGCCGAAGCCCTGGCACATGCTCACGCAGAAGGGTCGCGAGCCGTTCATCAGGATGAAGATGTTCCTCGAGGACGACAACGCTGTGCACAAGCTGGTGGCCAGCCAGTACAAGATCGCCCCGGAGAAACTGATGAGGACCGGCGGCTACGGTGGCCTGCCTCGTAAGTTTAACTCAGCTTGCGGAACCCCGATGAAGCCTATGCCGCCAACGAAGCTGGTCCAGGAGCAGCTTCAGAACGCCGCGAAGGCACAGGCGGCGGCTCAGGCAGCTGCCCAAGCGGCGGCCCAGCATCAGCAGGAGAGTCAGATGCAGTTGGGACCACCTCAGCAAAGTCCTCAGCATCCCCAGCATCCACAGCCGCCGCCACCGATGATGCTGACTCCTCCAGGTCCCCATCATCCTCACACGCAGCTCAGCATGCAGGAACTGCAGAAgaaacagcagcagcagcagcaacagcagatGAACCTTCACTCGCCGCACCATCAAATGACCCCGTCGCCCCTCCGTAGCCTCCACCCGCACATCTCTCCGAGCGTATACGAGATGGCGGCGCTGACGCAGGACCTGGACACGCAGACGATCACGACGAAGATCAAAGAGGCGCTGCTGGCGAACAACATCGGCCAAAAGATCTTCGGTGAGGCTGTCCTGGGTCTCTCGCAGGGTTCGGTCAGCGAGTTGCTGAGCAAACCAAAGCCCTGGCACATGTTGAGTATAAAAGGCCGAGAGCCGTTCATCAGGATGCAGCTGTGGCTGTCGGACGCACACAACGTCGACCGGCTGCAGGCGCTGAAGAACGAGCGGAGGGAAGCGAACAAGAGACGGCGAAGCAGCGGGCCGGGTCACGACAACAGTTCGGATACGTCCAGCAACGACACCGCCGAGTTTTACCACGCGGCTTCGCCCGGCCCGGGCCCGGCCTCGGCCAAAAAGCAGCGAGTCCTGTTCTCGGAGGAGCAGAAGGAGGCCCTGAGGCTCGCGTTCGCCTTGGACCCGTACCCGAACGTGGCCACCATCGAGTTTCTGGCCAGCGAGCTGGCGCTGTCCTCGAGAACGATAACCAACTGGTTTCACAATCACCGGATGAGACTGAAACAACAAACGCCGCACGGCCAGCCGGAGCCGCAATCGCCCAGAGAACCCGGCCAGCCGTTTGACCCCGTTCAGTTCCGACTGCTGTTGAACCAAAGACTACTGGAGATCCAGAAGGAGCGACTGGGCCTGGGCAACGTGCCGCTCCCCTACTCGCCGTACTTCAACCCTAACTTGGCCGCCCTCGTCGGTAACGCGCTCAAGGAACAGTGCTCGGGGCTGGACCTGTCGATGAACGCGCTCAAGAGGGAGCCGAACCAGGAGTTCGAGGACGAGGACGTCGAGGACGCCATGAGCAACCTCGGCAGCGAAGACTCCGAGGGCTCGGCGGGTAGCATAAAGAGGGAACCCACGGAGACACCTTCCGCGCCAACCACGGTTAGATCGAACAGGAGAAAACCGGCGGCGCCGCAGTGGGTGAACCCGGAGTGGCAGGAGCCGCCTAGAACGGGGGACGAGGTGATCATCAACGGCGTTTGCGTGATGCAGACGGACGACTACGGCGTGAAGAGGGAGGCGGAGGAGACGATCAGGGTTGAACCTACGCCGGTTCAGGACAGATACGAGGAGGACGCGCAGAGCGACGTCTCCTCCGTTTCCGGGAACAACGGCCAGGACAGGGACAGTCCGCTGCCGAGTCCGAAGTCTGGACAGCACAGTCCGGCGACGTCACCCAGACCGCCCTCCACGCAGCAAACGCAACAGTCCACCGAGGAGAGTCCTAAGGACAACGTGGTGAAACACGAGCCCGAGGAGACGTGGGACTATTAA
Protein Sequence
MQASAEANSLDIQAMQSMDWLFKKERIYLLAQFWQQRATLAEKEVSALKEQLAALKEQLAAANDGNSKTEGHQLSQTIQGSDQQQVHDASNPRRTPNSNLEQELQAKDKEISQLVEEVSRLQQSLQRLQETSAQGAARLEEELDARRQHISRLESKLERQRDYDDLKREINALRSVDLSQIPTGEPGKSLEHLLMERSKALQQTESLKPSSNTPDALGGLSSPLQRASTASPHGVGGVPPSSHVSSQQPPPPPPAAVTLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMNQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQHQQQQHQQQQQHQQQQHQQQQHQQQQQTTALSQLSQQQQQLQQAQPLIGLHPPTNTSSMNHLPSPTDPSSSSNTPAKSNTPLGTTPLSCLDAAEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTTIIETASSASVNGGSVIPAVPTAPPPKSPADQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGMPAFARGPQEGGPPEMSDERLAHILSESGHLQMRGEHEVSNDADSKSPSRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVEDLRGPREFSSSAMFPHFFSGGQGSLQGMERTQDDIRMALDAYHRELQKLNPTPGQNPSLTGLPGLPGLPGLLALQQQALQQHHLATNGGGVQDLSLGKIDPRNKMINGVSEEEKEKMEEAIRHAGSAFSLVRPKQETTAPQSTPSGSSASSPLGNSILPPAMTPSEEFSGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQESQMQLGPPQQSPQHPQHPQPPPPMMLTPPGPHHPHTQLSMQELQKKQQQQQQQQMNLHSPHHQMTPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVEDAMSNLGSEDSEGSAGSIKREPTETPSAPTTVRSNRRKPAAPQWVNPEWQEPPRTGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSGNNGQDRDSPLPSPKSGQHSPATSPRPPSTQQTQQSTEESPKDNVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394913;
90% Identity
iTF_00982081;
80% Identity
iTF_00965939;