Basic Information

Insect: Megalocaria dilatata
Gene Symbol: -
Assembly: GCA_034642435.1
Location: CM067858.1:35812281-35821367[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.045 5 8.9 0.1 2 20 223 241 222 243 0.93

2 10 0.053 5.9 8.7 0.6 1 23 256 278 256 278 0.97

3 10 7.6e-05 0.0086 17.6 1.3 2 23 327 349 326 349 0.95

4 10 0.3 34 6.3 0.1 1 20 408 427 408 429 0.80

5 10 0.0078 0.88 11.3 6.8 2 23 458 479 457 480 0.94

6 10 4.1e-05 0.0046 18.5 2.1 1 23 486 508 486 508 0.98

7 10 1.2e-06 0.00014 23.3 2.0 1 23 514 537 514 537 0.96

8 10 1.3e-07 1.5e-05 26.3 0.7 1 23 543 565 543 565 0.99

9 10 4.5e-06 0.00051 21.5 2.4 1 23 571 593 571 593 0.99

10 10 1e-06 0.00012 23.5 1.8 1 23 599 621 599 621 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.045	5	8.9	0.1	2	20	223	241	222	243	0.93
2	10	0.053	5.9	8.7	0.6	1	23	256	278	256	278	0.97
3	10	7.6e-05	0.0086	17.6	1.3	2	23	327	349	326	349	0.95
4	10	0.3	34	6.3	0.1	1	20	408	427	408	429	0.80
5	10	0.0078	0.88	11.3	6.8	2	23	458	479	457	480	0.94
6	10	4.1e-05	0.0046	18.5	2.1	1	23	486	508	486	508	0.98
7	10	1.2e-06	0.00014	23.3	2.0	1	23	514	537	514	537	0.96
8	10	1.3e-07	1.5e-05	26.3	0.7	1	23	543	565	543	565	0.99
9	10	4.5e-06	0.00051	21.5	2.4	1	23	571	593	571	593	0.99
10	10	1e-06	0.00012	23.5	1.8	1	23	599	621	599	621	0.98

Sequence Information

Coding Sequence: ATGGAATCGCAAACTGAGCAAACCGAGCTCTTGGAAACGGTTGTAATAGCTGGAGAACAACAACCCCAGTATTTGATTCACAGAATACCAGAAAGCCAACAATTAATCACtccagaattattacaaaatcatGGTGGTCTAGTTGTTGACATCGGTGGAGGAGATTTTATTCCTGTAAACTATTCATCAGAAGATCTACTCTCACAAGATTTAACCGATGAAGACAGAAATTTGGCTGCTGCCCTGGTTGCTGTACAACTGAGTCAACAACAAAAACAGCAACAGCAGCTCCAAGATGCCAATACTTTGTCACAATTAGATGCTAATCATGCATTAGAAAGTAAAATtttggaagaacaagtcatcaTAGACAAAAATGGTACTTTGAATAGTGGTTACTTGCAAATAGTTGGTTCAGACAGTATTTATGTTGAAAAAGAAGTATTACCTAAGTTTGTTACGACTGGCAAAGATACATCACAGAGATATGTCACCGAAATTCATACTAACTCTGTTCCAATTCACAATGAGGAAGAATTGGATAAAAGAGAATCAGATGGTTTGGAAGGAGATAAAAGTGAAAATCGTTCATCCAAAAAAACACTTCCCCACAAGAAGAGAATCACGAAAAAATTAAAGAGACCAtctacttcaaataaaaaaattaaatgtaatttaTGTGAGCAGCTTTTTACATCCAGTGATGACTTCGCTCAGCATGAACTGCTTTGCCAAACCACTATTACACCAATCACTGCAAATCTATTCAATTGTCAGCTGTGCAATGCATCTCTTACTGAtcaattacaattttttgagCATTTGAAAGCTCATTATGAGCCTACTGCAACTAtcacaaatatttcaaaaactccTGTTCCCACTCCAGTAGAGAATGAACTTCCTAAGCAAGATGTAAAGAATGAAACTGTCCCTGAACCTACTGCCAAAGATAGTATTTTATCGATGCTCAACCTCACCTGTACAGTATGTAACAAAACATTCCGGAAACAAAAGACCTATGACGCACATATGAAGGAAGTACACGAAAAATATGAGCTTAATGAATTCAGTGAACCAGAGGACCTTATGGAAGGTATTGATGTGTCTGTTAATTCGAACCATGGTTCAGATGCAGAAGAAGCAGACTCCAAATCCTGGTACAAAGAAGAGGAACTTCAACAAACTGAAGAAGATCTTAAAGAACTTGAAGCTGAAGATCATGTTTGCCACATATGTAATCAACCTTTTCCTTTGAGAGCCATTTTACTGCAACATTTAATTTCATGTCGTGCTATCACTGGAAATACAAaacctACAGCACCAGAAATtgtgaagaagaaaaataagaaaactaCAAAAGCCAAAATATCATGCAACTTATGTGAGCGAACTTTCACCCATAGAAACTCTCTTATGTATCATTTGCACAGTCATCATACTCGTGTAAGGCCGCATCAGTGTGAAACATGTGGAAAAAGGTTCTTTGCTTCTAGTGCTTTAAAGGTTCATCGAAGATTGCATTCTGGTGAAAAACCGTACCATTGTACGGAATGTGGTAAAAACTTCAGACAGTGGGGGGACTTGAAATATCACATGACCTCTCTTCACTCTACTGAGAAACAGTTCCAATGTGAATATTGTGGTAAAGAATTTGCGAGAAAATATTCTTTGGTTGTACATAGGAGGATTCATACTGGAGAAAGGAATTATAAGTGCGAATTTTGTGAAAAAACATTCAGGGCTTCTTCATACCTTCAAAATCATAGGAGAATACATACTGGTGAAAAACCTCATGAATGTGATATATGTGGTAAGCCATTTAGGGTTCGATCAGATATGAAGAGGCATCAAAAATCTCATAATAAAAAaccgaataataaaaaagtatataaattggAAAACTTAGAAATGGCTGTTGAGACAACTAAAACAAAAGAGGAGATTGATAATGGATCTAATGATACTGCTGAACTTCACATAAACGATCCAGAACAAGAAACTGAAATTCTCTATGATCCATTAGCCCCTAGGGATGGAATGTATACCAACGGACATCAACTATTTTTAGTGACATATTCTGGGGATGTGACAAAAATGGATTCAACTTGGATCCAAACTACAACGTAA
Protein Sequence: MESQTEQTELLETVVIAGEQQPQYLIHRIPESQQLITPELLQNHGGLVVDIGGGDFIPVNYSSEDLLSQDLTDEDRNLAAALVAVQLSQQQKQQQQLQDANTLSQLDANHALESKILEEQVIIDKNGTLNSGYLQIVGSDSIYVEKEVLPKFVTTGKDTSQRYVTEIHTNSVPIHNEEELDKRESDGLEGDKSENRSSKKTLPHKKRITKKLKRPSTSNKKIKCNLCEQLFTSSDDFAQHELLCQTTITPITANLFNCQLCNASLTDQLQFFEHLKAHYEPTATITNISKTPVPTPVENELPKQDVKNETVPEPTAKDSILSMLNLTCTVCNKTFRKQKTYDAHMKEVHEKYELNEFSEPEDLMEGIDVSVNSNHGSDAEEADSKSWYKEEELQQTEEDLKELEAEDHVCHICNQPFPLRAILLQHLISCRAITGNTKPTAPEIVKKKNKKTTKAKISCNLCERTFTHRNSLMYHLHSHHTRVRPHQCETCGKRFFASSALKVHRRLHSGEKPYHCTECGKNFRQWGDLKYHMTSLHSTEKQFQCEYCGKEFARKYSLVVHRRIHTGERNYKCEFCEKTFRASSYLQNHRRIHTGEKPHECDICGKPFRVRSDMKRHQKSHNKKPNNKKVYKLENLEMAVETTKTKEEIDNGSNDTAELHINDPEQETEILYDPLAPRDGMYTNGHQLFLVTYSGDVTKMDSTWIQTTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00394755;
90% Identity: iTF_01024306;
80% Identity: -