Basic Information

Insect: Megalocaria dilatata
Gene Symbol: -
Assembly: GCA_034642435.1
Location: CM067862.1:36051303-36053384[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0031 0.35 12.6 1.3 1 23 166 188 166 188 0.97

2 15 1.6e-05 0.0018 19.8 2.4 1 23 191 214 191 214 0.97

3 15 0.095 11 7.9 0.2 1 20 248 267 248 269 0.90

4 15 3.8e-05 0.0043 18.6 0.4 2 21 289 308 289 309 0.95

5 15 3.4 3.9e+02 3.0 0.2 2 23 323 345 322 345 0.91

6 15 0.033 3.7 9.3 1.2 1 23 353 376 353 376 0.92

7 15 1.4 1.6e+02 4.2 0.9 1 19 390 408 390 413 0.81

8 15 0.7 79 5.2 3.3 1 23 423 445 423 445 0.94

9 15 5e-06 0.00056 21.4 1.9 1 23 451 473 451 473 0.96

10 15 6.1e-05 0.0069 17.9 0.5 1 23 479 502 479 502 0.96

11 15 6.3e-05 0.0071 17.9 1.2 1 23 510 532 510 532 0.99

12 15 1.7e-05 0.0019 19.7 1.4 1 23 538 560 538 560 0.98

13 15 0.00081 0.091 14.4 1.0 1 23 566 589 566 589 0.96

14 15 0.0005 0.056 15.1 4.6 1 23 603 625 603 625 0.97

15 15 2.8e-06 0.00032 22.1 3.3 1 23 631 654 631 654 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0031	0.35	12.6	1.3	1	23	166	188	166	188	0.97
2	15	1.6e-05	0.0018	19.8	2.4	1	23	191	214	191	214	0.97
3	15	0.095	11	7.9	0.2	1	20	248	267	248	269	0.90
4	15	3.8e-05	0.0043	18.6	0.4	2	21	289	308	289	309	0.95
5	15	3.4	3.9e+02	3.0	0.2	2	23	323	345	322	345	0.91
6	15	0.033	3.7	9.3	1.2	1	23	353	376	353	376	0.92
7	15	1.4	1.6e+02	4.2	0.9	1	19	390	408	390	413	0.81
8	15	0.7	79	5.2	3.3	1	23	423	445	423	445	0.94
9	15	5e-06	0.00056	21.4	1.9	1	23	451	473	451	473	0.96
10	15	6.1e-05	0.0069	17.9	0.5	1	23	479	502	479	502	0.96
11	15	6.3e-05	0.0071	17.9	1.2	1	23	510	532	510	532	0.99
12	15	1.7e-05	0.0019	19.7	1.4	1	23	538	560	538	560	0.98
13	15	0.00081	0.091	14.4	1.0	1	23	566	589	566	589	0.96
14	15	0.0005	0.056	15.1	4.6	1	23	603	625	603	625	0.97
15	15	2.8e-06	0.00032	22.1	3.3	1	23	631	654	631	654	0.97

Sequence Information

Coding Sequence: atgaatgataCAAATTGCTGTGTTTGTTTAAAAGACAATGCCACTATTCCTCTGAGTGCTATCGATTCCAACAAAGAAACAATCGCatctaaattaaaaaaagttgtaCCTGAAGTGCTATGGAAGGACAGTTTTACAATTTGTCCTCAATGTTCGAAGACTCTAAACATTGTTTTAGAATTTTGGAATAAATGCATTAAATCGAACACTCTTAGATTGAAACAAGAGGAATGTGAACCAAATGAATGTGTGTTTGAGGAGCCTGAAAGCTATAGTAATGAAGAAATGATAATAGAGTCACCTGAAAACAATACAGGAGAAGACTCGGAACACACCATAGCTGTGACgtctgaaatttttaaaattgagcTGAATTCTAAAGAACATTTATATCAACATAATACAGAAATAAACGATTCTCAGCATCCTTACAAGAATGATTTACTTTGTGTTGAAAAAAATGGGAAAACCATAAATGATAAAActgaaaatgattatttttgtgaaaaatgtAACCTTAGTTTTCTTTCAAAGTCTCAATATGAAGACCATATTGAAAAACACAATGTTTTCATATGTTTCCATTGTAATAAACCATTTAAAAGCAAGGTAATGCTCGCTAAACATATAAAGGTTAAACATGATGCACAAAAAAAGGAGCCTGAATCTGAGGATTTAAATGATCATAGCGAACTTCTTCAGAGCACCAATGGAAATTCAAAgtgtaaaatgaataaaatgtaTAAATGTGTTAAGTGTGAAAAATCTTATAAGGCTGAAAAAGTGATGATAAATCATATGGTTACCTGTGATGGTGTTAAAAGAcattccaaaataaattttccaaaAGACTTCTCCAAAAATGAGTGTGAGAATTGTGGCAGGTTTTATACAacggaaaaaaatttgaaagctcATATGAAACAGTGTAAAAAAGGCCAACACTTATCAAAACTCCAAGATAACAAATGTTACGTGTGTGACATTATCTTAAAAAATCCCAATGAAAAGTTTGAGCATGCTTTGAAAGAGCacaatgtcaatttaaaagtgCACTATATATGTCAGTATTGCTATAAGCAGTTTTTAAGTAATGAAAATTTACATTCTCATGTAGCGGAAGAACACGATAgtgtaaaaaccaaaaaaacttaCACTGAAAGAAGTTATTCATGTGAAGtgtgttcaaaaatatttggttATGTTAAAGAAGTAATCGAACATTGTGTTAAAGAGCACCAGATGGACCCAAAGGCTGTTAAACCTTACCTGTGCGACAAATGCTGCACACGTTTTACATCATCAGCGAATATAATTCAGCACAAACAGTATCACGAGGGTGAACGAAGCCATATATGCAGTTTTTGCGGGAAGAGTTTCATTACAAAAAGCGATCTAACAGTACACGAATACACCCATTTGAACCGTAGGAATTACAAGTGTGAAATATGCGAAAGCGCATTTAATACTAACAAGAATTTAAGGTCACACAAATTAGTCGTTCATACGGATTCAAGTTTATGGAAGTACCAATGTAATTTGTGCGATAAAAAGTTCCCTTTGAAATCGGGTTATGATCAACATATCAAGAGACATTCTGGAGACAAAAGATTTAAGTGTTTGATCTGTGAGAAGTCTTTTGTTAGCAGTAGTGAATTGGGTAAACATAAACGATTTCATTCGAACGAAAGAGCTTTTAAGTGTTCTCAGTGCGGTAAGGAGTATAAAGACCGACGAGTTTATGAGGTGCATTTGACGAAGGTTCATGGGATAGGAAATGCTAAGATTCCTGTCCGTGTGAGGAAGTTTGCTTGTCATATTTGCCCAGGAACGTTTTTCGATAAGCAAAAATTATCAAGACATATGTGCACACATACTGGGATCAAACCATTTAATTGTCATATTTGCGAGAAGCGATTTAGTGATAAGTCATATTTGAAGTATCATTTGAAAGTTGTTCATAATTTTATTGATGAGCAGAGCAACAAAATTAGtaatgttgaaattatgcaGAGATCTTAA
Protein Sequence: MNDTNCCVCLKDNATIPLSAIDSNKETIASKLKKVVPEVLWKDSFTICPQCSKTLNIVLEFWNKCIKSNTLRLKQEECEPNECVFEEPESYSNEEMIIESPENNTGEDSEHTIAVTSEIFKIELNSKEHLYQHNTEINDSQHPYKNDLLCVEKNGKTINDKTENDYFCEKCNLSFLSKSQYEDHIEKHNVFICFHCNKPFKSKVMLAKHIKVKHDAQKKEPESEDLNDHSELLQSTNGNSKCKMNKMYKCVKCEKSYKAEKVMINHMVTCDGVKRHSKINFPKDFSKNECENCGRFYTTEKNLKAHMKQCKKGQHLSKLQDNKCYVCDIILKNPNEKFEHALKEHNVNLKVHYICQYCYKQFLSNENLHSHVAEEHDSVKTKKTYTERSYSCEVCSKIFGYVKEVIEHCVKEHQMDPKAVKPYLCDKCCTRFTSSANIIQHKQYHEGERSHICSFCGKSFITKSDLTVHEYTHLNRRNYKCEICESAFNTNKNLRSHKLVVHTDSSLWKYQCNLCDKKFPLKSGYDQHIKRHSGDKRFKCLICEKSFVSSSELGKHKRFHSNERAFKCSQCGKEYKDRRVYEVHLTKVHGIGNAKIPVRVRKFACHICPGTFFDKQKLSRHMCTHTGIKPFNCHICEKRFSDKSYLKYHLKVVHNFIDEQSNKISNVEIMQRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -