Basic Information

Insect: Megalocaria dilatata
Gene Symbol: -
Assembly: GCA_034642435.1
Location: CM067857.1:38927938-38945514[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.01 1.1 10.9 1.6 2 23 89 110 88 110 0.97

2 25 0.00054 0.061 15.0 4.8 2 23 117 138 116 138 0.97

3 25 0.15 17 7.3 0.2 1 23 144 166 144 166 0.91

4 25 0.00062 0.07 14.8 0.1 2 23 171 192 170 192 0.96

5 25 0.00038 0.043 15.4 0.5 1 23 198 220 198 220 0.98

6 25 0.0045 0.5 12.1 2.0 2 20 232 250 231 253 0.93

7 25 2.2e-06 0.00025 22.4 2.7 1 23 278 300 278 300 0.98

8 25 2.2e-05 0.0025 19.3 0.7 1 23 306 328 306 328 0.98

9 25 0.0061 0.68 11.6 4.2 1 23 334 357 334 357 0.96

10 25 0.0019 0.22 13.2 1.6 1 23 367 390 367 390 0.97

11 25 6.5e-06 0.00073 21.0 0.6 1 23 466 488 466 488 0.99

12 25 0.0071 0.8 11.4 1.0 1 23 494 516 494 516 0.98

13 25 0.26 29 6.5 0.6 2 23 520 541 520 541 0.98

14 25 0.019 2.1 10.1 1.7 2 23 582 603 581 603 0.96

15 25 0.0042 0.47 12.2 0.7 1 23 609 631 609 631 0.98

16 25 8.5e-05 0.0096 17.5 0.4 1 20 635 654 635 657 0.93

17 25 0.006 0.67 11.7 1.4 1 23 663 685 663 685 0.98

18 25 0.42 47 5.9 1.2 3 21 958 976 956 977 0.91

19 25 0.00024 0.028 16.0 2.8 1 23 1024 1046 1024 1046 0.97

20 25 5e-06 0.00056 21.4 3.7 1 23 1054 1076 1054 1076 0.98

21 25 2.2e-05 0.0025 19.3 1.2 1 23 1082 1104 1082 1104 0.97

22 25 0.011 1.3 10.8 1.9 1 23 1112 1134 1112 1134 0.98

23 25 0.0012 0.13 13.9 0.0 1 23 1287 1309 1287 1309 0.94

24 25 0.56 63 5.5 0.1 2 23 1314 1335 1313 1335 0.96

25 25 0.48 54 5.7 0.1 1 22 1341 1362 1341 1362 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.01	1.1	10.9	1.6	2	23	89	110	88	110	0.97
2	25	0.00054	0.061	15.0	4.8	2	23	117	138	116	138	0.97
3	25	0.15	17	7.3	0.2	1	23	144	166	144	166	0.91
4	25	0.00062	0.07	14.8	0.1	2	23	171	192	170	192	0.96
5	25	0.00038	0.043	15.4	0.5	1	23	198	220	198	220	0.98
6	25	0.0045	0.5	12.1	2.0	2	20	232	250	231	253	0.93
7	25	2.2e-06	0.00025	22.4	2.7	1	23	278	300	278	300	0.98
8	25	2.2e-05	0.0025	19.3	0.7	1	23	306	328	306	328	0.98
9	25	0.0061	0.68	11.6	4.2	1	23	334	357	334	357	0.96
10	25	0.0019	0.22	13.2	1.6	1	23	367	390	367	390	0.97
11	25	6.5e-06	0.00073	21.0	0.6	1	23	466	488	466	488	0.99
12	25	0.0071	0.8	11.4	1.0	1	23	494	516	494	516	0.98
13	25	0.26	29	6.5	0.6	2	23	520	541	520	541	0.98
14	25	0.019	2.1	10.1	1.7	2	23	582	603	581	603	0.96
15	25	0.0042	0.47	12.2	0.7	1	23	609	631	609	631	0.98
16	25	8.5e-05	0.0096	17.5	0.4	1	20	635	654	635	657	0.93
17	25	0.006	0.67	11.7	1.4	1	23	663	685	663	685	0.98
18	25	0.42	47	5.9	1.2	3	21	958	976	956	977	0.91
19	25	0.00024	0.028	16.0	2.8	1	23	1024	1046	1024	1046	0.97
20	25	5e-06	0.00056	21.4	3.7	1	23	1054	1076	1054	1076	0.98
21	25	2.2e-05	0.0025	19.3	1.2	1	23	1082	1104	1082	1104	0.97
22	25	0.011	1.3	10.8	1.9	1	23	1112	1134	1112	1134	0.98
23	25	0.0012	0.13	13.9	0.0	1	23	1287	1309	1287	1309	0.94
24	25	0.56	63	5.5	0.1	2	23	1314	1335	1313	1335	0.96
25	25	0.48	54	5.7	0.1	1	22	1341	1362	1341	1362	0.95

Sequence Information

Coding Sequence: atggaaGATATAAACTCCTACATTGTTCTGTCTTTGACTGGTGATGGATCGATTCATTTTATTCCCAATCTTATTACTGGCTATATTCCAAATTTATATGTTGCGGATGCTTCTAGCCAGAAGAGTCTATCTGATATTGAGTTTTTAGTTCCTCAAAATATAGGAGACTCTGGCGATGTCCCTAGTGAAAATTTGATGCTCAAAgcagaatatttaaataaggaatTGAATTCTGAGAGTCAATTAAACGAAGAAACTGTGATCAAATGTTCACATTGCGAAAATAGTTTTGACAATTATGACCTATACATGGTACATGAGaaaactcatcaaaatgaaGATCAATTGGAATGCACAAAATGTAACAAATCTTTCAAAAAGGTCCATATGTATAAGAGGCATTTATTAACTCACCAAGATGAAAAAAACTTCAATTGTATCATATGTAATGCTGGTTTCAATTCAgagaataattataaaatacataTGGTTTTACATGGAAGATCTTCAGTCTGTCCTATATGTAATTTATCATTTCAAAGAATGGCCAGTTTGAAGTCACATTTAGCTATTCATCAAGTTGAGGAATTCCATACCTGTCCAGAATGTGCATCAGAGTTTGAGAATAAGgttGAACTGAGAAAACATATCAAAATTCATACTACTCAAGTGACAAATGAAtctaaattattaatttgtaaCTATTGTAAAGTTAAGTTTGAAACATCTTCATTATTGAAGAAACATGTTGCCTGTCATATGAAGgtgaaaaaaattgtattgaatggaaagaaaatgaagaaggaCCAAGTCCTAGTAAAAGAACATAAGCATAAGTGTAAGGTGTGTGGTAAAACATTTCAGAAACTGTCCTTATTAGAAAGACATTTGAGAATTCATAATGGGGAACGACCGTTTGTGTGCCAAGTTTGTTACAAAGGCTTTACACAAAAAGGAACACTACAAATCCATTTGATGAAACATACTGGAGTAAAACCATTCTGCTGCACCTTATGTCCTGCAAAGTTCCACCAGAAGGGCAATTTGAAAGTGCATGTTCAAAAAACACATACCGCATCTTCAGAAggcgaaaaaatattcaaatgctCCGAATGCGACTGCATTTTCAAGAAAGTCGCTTCACTTAACGGTCACATGACAAAAATTCATTCCAATAAGAGTCTTATTAACATAACCACAGTTATCGATCAACTGAAGAATTTAGAAAAACAATTAGGAGGGAGATCAACTGAAGTGGAAAAAGATGAAATCATCGAGAATCCTCAAAATTTAGATAGTGCAGAGCAAGTAAACGATGTATCTTCAGAAGAAAAGACCAATGAAAATTGTAAAGTTTACTCTCTTATGCAAAAATCTATTGGAGCTAATAAAGTTTATGTTTGTTCATATTGTGATAGAGAAACGAAAAAACCCTCTGATATGATCCGTCACATTCGGACCCATACCAAAGAAAAGCCATTTAagtgTTACTATTGCATTAGTTCGTTTGCACTAAAATCAACGCTTCTGGCACATATGCAAACACATAAAAAAAGGAAATGTGGAAAATGTTCTAAAGTTATTTACTCAGCTAAAGTATGGAAAGCTCACACCAGAAAGCATGATTCCAACTCCACCCTTAACTCCGATTTGAAGCAAGAAGGCCATAATAATGCAGACACATATTCAGTATCTCCAAACACTCCCACTAAACgaaaaaagattattttggATAAACCATTGAAGTGCCCATACTgttcagcatcatttttaaggaCGATAAACCTGAAACGACATGTGTGTGAACATAATGGAGAAAAGACATTCAAGTGTTCAATATGTTCAAGATTATTGCCAACCACATATGCATTGAAGGAGCACATGAAAAATCATAGGAAAAACTTTAGTTGCGGTGTATGcgacaaaaaatttatcaattcaacaTCATTGAAACGGCATGTTCCAATTCATGAGGGCACAAAACCATATGAATGTCCATATTGTAAAAGAGGATTTGAAGATATCGTAATGTGTAGGAAACATATCAATACTCACAAGGAATCTAAGGAAGTCGAGAATACTCCGGACAACTGTAATATTTTTAACGAAACTACAGAAAATATCCACTTAACCAACTCTTCTGACAATTCATCAAGAAAAACCACCATATTAAGAGTAGATACAGATGGTGTAGTATTTGACAATGCTTTtaatattgaacaaaataataGTACAGTTACAAGTACAGTTCTCCAATCAGTTCAAGCTATCGATGCATCAAATATTTCAGATCCGGTCCCGATTTTAGAATCGGAAGATCAAAATCTTCAAACCATTTTAGTTGATTGTCAGAGTTTACCAAATGGAGAGGTACACAACTATTTTTTATCCCAGTTAAAACTACAGtcAAATGATGCTATTGCAGTCAAtgctataaatgaaaatgaagaatctCCAATTGTGTTCAATGTCCAAAATCTCAATGTCGACCCGAGTGTGGGAAATGCACTAAATGATATTACATTCACTAATGACTTTGTGGATAAATCGGCAGACCCAGTGTTCAGTTTCTCAGAGAAGAGGTTGTTGAAGCAAAACCAAGGACTTAATTCTGCTCTTGATACTACCGAAAATTGTATCGTTAATGAGATTGGTGACGATTTTTTGTCAAATAATGTTTCCCTGTATCCAAATACACAAATAACTTTCGGCAGCCCTCCAGAACTGAACTCCAGTACAATAAATATGATAGATTCTTCACAACATGAATTCATCGGAGTGCTGGAAAAAACTGACCCCAATCCAGAGTGTAATCTACTAtttgatgttgcaaaagaaacACCCGAAACTATCGGTTTAAGTATGATCCATTGTATGCTttgcaaaaaaatgtttgatactATGGAATCTTATCAAATTCACGTTTGCATGAAATCAGTATTGAAAAGAAGCGACGATATCTCGCCGTCCCCTGAAAGGCTTCTCGAAACGATTACGCAGACAAATAACACCGGAAAAGCAGACATTGATAAAGCGAAAGATAAATCGAAAAGTTCGGTCAAGAGGTTATTCAATTGTGTTTATTGTGAGAAGGAATTTACTAGTAGAGGTCATTACATGAAGCATGTGAACATGCATCAAAAAAAGGGAAACAAATTGCACAAATGCAAGTTTTGTGATAAAGAGTTTAAGAAACCTTCAGATCTGGGTCGTCATTTGAGAACACACACCGGAGAGAAGCCATTTGCGTGTGACCAATGTGACAAAAAATTCTCACTGAAATCCACTTTAGAAGGCCACTATAGAACACATAATCCAAGTGCAacgaaaaattttgtttgcGAAGTTTGTAATTCATTTTTCAGTTCGAAAGCTAGTAGAACGTTGCACATGCATGTACATACTGgaGTTAAGCCACAGAAATGTAACTTTTGTGACCAGTACTTTAGAACTGCCGCACATAGGAAAtgtcatgaaaataaaatgcaCTTGAGTGGTCAAAAAAAGGTGCGTCAGAGTAAAGCTAAGAAAATCACTAACTTGCTTGCCGCAGCAGTGGATATGGCTGTGAATGAAGCTACTAGTGAAAACCAAGTATTAGAAGAACAGGAAAATCCTGGATATTCCGAAATACAGgTGGAATTTCCTGAAGACAAATATCCACCAGAATCTATTCCAATCGACCCTGTTCTATTACAACAActgcaaaattcaaatatccttTTACAAGGATTGGATCACAATGTACTTGCATGTACGGAAAGTGTTAATGGTTTGGAAACTATAGAAGCTTCAGATATAATCAGCAGCGAATGTTTTGAGGAAAATGTTAGTTCTATCAGTCAGATTGTAGGCAATTTTCTATGCGAAATATGTCAAGAAGAATTTGGTAGCCCAGATGCCTTGAAGGAACACATGGATTTACATTTGAAGAAATTGGAGTGTGAACAGTGTagtctatggttttcttcaatcGAAGCCTTGTCTGAACACCAACAGTCACATTTGTCTACTGAGTCATATTCTTGTCTTCTTTGTGATATCGTCTTTTTCGGAATCCAGGAATTAAAAGGCCATTTAAGAAggtaa
Protein Sequence: MEDINSYIVLSLTGDGSIHFIPNLITGYIPNLYVADASSQKSLSDIEFLVPQNIGDSGDVPSENLMLKAEYLNKELNSESQLNEETVIKCSHCENSFDNYDLYMVHEKTHQNEDQLECTKCNKSFKKVHMYKRHLLTHQDEKNFNCIICNAGFNSENNYKIHMVLHGRSSVCPICNLSFQRMASLKSHLAIHQVEEFHTCPECASEFENKVELRKHIKIHTTQVTNESKLLICNYCKVKFETSSLLKKHVACHMKVKKIVLNGKKMKKDQVLVKEHKHKCKVCGKTFQKLSLLERHLRIHNGERPFVCQVCYKGFTQKGTLQIHLMKHTGVKPFCCTLCPAKFHQKGNLKVHVQKTHTASSEGEKIFKCSECDCIFKKVASLNGHMTKIHSNKSLINITTVIDQLKNLEKQLGGRSTEVEKDEIIENPQNLDSAEQVNDVSSEEKTNENCKVYSLMQKSIGANKVYVCSYCDRETKKPSDMIRHIRTHTKEKPFKCYYCISSFALKSTLLAHMQTHKKRKCGKCSKVIYSAKVWKAHTRKHDSNSTLNSDLKQEGHNNADTYSVSPNTPTKRKKIILDKPLKCPYCSASFLRTINLKRHVCEHNGEKTFKCSICSRLLPTTYALKEHMKNHRKNFSCGVCDKKFINSTSLKRHVPIHEGTKPYECPYCKRGFEDIVMCRKHINTHKESKEVENTPDNCNIFNETTENIHLTNSSDNSSRKTTILRVDTDGVVFDNAFNIEQNNSTVTSTVLQSVQAIDASNISDPVPILESEDQNLQTILVDCQSLPNGEVHNYFLSQLKLQSNDAIAVNAINENEESPIVFNVQNLNVDPSVGNALNDITFTNDFVDKSADPVFSFSEKRLLKQNQGLNSALDTTENCIVNEIGDDFLSNNVSLYPNTQITFGSPPELNSSTINMIDSSQHEFIGVLEKTDPNPECNLLFDVAKETPETIGLSMIHCMLCKKMFDTMESYQIHVCMKSVLKRSDDISPSPERLLETITQTNNTGKADIDKAKDKSKSSVKRLFNCVYCEKEFTSRGHYMKHVNMHQKKGNKLHKCKFCDKEFKKPSDLGRHLRTHTGEKPFACDQCDKKFSLKSTLEGHYRTHNPSATKNFVCEVCNSFFSSKASRTLHMHVHTGVKPQKCNFCDQYFRTAAHRKCHENKMHLSGQKKVRQSKAKKITNLLAAAVDMAVNEATSENQVLEEQENPGYSEIQVEFPEDKYPPESIPIDPVLLQQLQNSNILLQGLDHNVLACTESVNGLETIEASDIISSECFEENVSSISQIVGNFLCEICQEEFGSPDALKEHMDLHLKKLECEQCSLWFSSIEALSEHQQSHLSTESYSCLLCDIVFFGIQELKGHLRR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -