Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_034642435.1
Location
CM067856.1:19365093-19374373[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.5 9.4e+03 -2.0 0.0 8 44 21 57 19 58 0.70
2 3 5e-05 0.056 14.7 0.0 2 34 268 303 267 307 0.87
3 3 3.7e-10 4.2e-07 31.1 0.2 2 43 352 397 351 399 0.92

Sequence Information

Coding Sequence
atgatttttttttggattcttaCAATTTCCATCCCACAAATATGTTTAGCGTGGGATTCGGAACAATTAGAAATTTTCGATGTTGTTGAGGAAGTTCAAGAGAACTTTTACAATCTTTTAAACGTATCGAATGATGCTACTCATGATCAAATCAAATCAGCGTTCAGAAAGCTTTCATTGAAACTGCATCCAGACAAAAATGTAGACAGAGACACTTCCGCTGAATTTAGAAATTTAGTCAGTGTTTATGATGTTTTGAAAACACCATCGAAGAGAAAACATtatgatgaaatattgaaaaatgggTTACCTAATTGGAAGAGTGCagtatattattaccgatatGTTCGTAAAATGGGAATGACCGaagtttgtattattttgtttacGATTATTACAATTGGGCAATATCTAGTCAATTGGGCTGcctatttagaaaaaaaatatgaattgGAGCAaacaagaaaaaagaaaagaaaagatAGAGATAAAATCGACGTGTTTGAGTTAGATAAGCCTTCTATATATGACACATTGCCAATACAAATACCTCGTCTAATCTGGTTTATTATTATATCGATACCTTATGCTATAGTTGCTTTGAAGTCGATGCTTACTTACCATATAcaagaaacaataaataaacctcCACCAGAAGAACCGGCAGTTGAGGTTCCTAAGATCAAAACTGTTCGAAAACGAAATAAGGGATTTGCAATTCCTGAAGgtccaaattttgaaacaacgtATAATCCACAATCTTCCCATGATTCTTCATCTAATGCTACCCCAGTCAGTGGTGGTCTCTGGACAGACGATGACCTAACTGAACTCATTagattgattaaaaaatatccTGGAGGCTCAAGCAATCGTTGGGAGATTATAGGGGAAGCTTTAGGACGTTCAATTCCGGAAGTGACCTATATGGCCGCTAAAGTAAAAGAAAATGGTTATCGACCTCCTAATGAGGAAGAAAAAGTGGCAGAGCCTCTAGCAGTCAAGATAAAAACGAAAAAAGATGTTCTTCTTCCAGATGAAGCTAAAGAAGTGCAAAGTTGGAATCAAGATCAACAAAAAGCATTGGAAGAAGCCCTTCTCAAATATCCAAAAGGTTGTAATGATAGATGGGATAGAATTGCCGAACATGTACCGAATAAGAATAAAGATGAATGTATGCTGAGATTCAGGTTTCTAGCAGCAAGCCTTAAAAAGCAAAAGGAAAAACAAAGGGAAGAAAACTCAGAGAAACCGCAAGAAGATATAAATGAATGA
Protein Sequence
MIFFWILTISIPQICLAWDSEQLEIFDVVEEVQENFYNLLNVSNDATHDQIKSAFRKLSLKLHPDKNVDRDTSAEFRNLVSVYDVLKTPSKRKHYDEILKNGLPNWKSAVYYYRYVRKMGMTEVCIILFTIITIGQYLVNWAAYLEKKYELEQTRKKKRKDRDKIDVFELDKPSIYDTLPIQIPRLIWFIIISIPYAIVALKSMLTYHIQETINKPPPEEPAVEVPKIKTVRKRNKGFAIPEGPNFETTYNPQSSHDSSSNATPVSGGLWTDDDLTELIRLIKKYPGGSSNRWEIIGEALGRSIPEVTYMAAKVKENGYRPPNEEEKVAEPLAVKIKTKKDVLLPDEAKEVQSWNQDQQKALEEALLKYPKGCNDRWDRIAEHVPNKNKDECMLRFRFLAASLKKQKEKQREENSEKPQEDINE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00348800;
90% Identity
-
80% Identity
-