Basic Information

Insect: Megalocaria dilatata
Gene Symbol: -
Assembly: GCA_034642435.1
Location: CM067854.1:76357087-76361647[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.9e-07 0.00019 22.2 0.0 3 39 1228 1264 1226 1268 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.9e-07	0.00019	22.2	0.0	3	39	1228	1264	1226	1268	0.90

Sequence Information

Coding Sequence: ATGGCCGTTAACTATATTTCAAGCGTTCCCAGATTACTCGGTCGCGAGAATTTCGCGGAGTGGAGTTTCGCTACAGAGAACTTTTTCATTTTAGAAGGAATTTCCGAATGTTTAACCGGCAAACAAACGGACTCAGTGATGGTTGCTAAAGCCAAAGCGAAGTTAATTTCGACTATAGACCCGTCTTTATACGTGCATATCAGAAATAGGAACACGTGCAAGGAAGTTTGGgatactctgaaaaatatgtACGAGGACAATGGATTCACACGTAAGATCGGTTTACTTCGAACTCTTATTTCCCTACGACTCGAAAGTTGCAGTTCGATGGAAGCGTACGTAACCCAAGTAATCGAGACGGCAAGAAAGTTGGACAGGACAGGATTTCATATAAGTGAAGAATGGATCGGTTCCCTTCTTCTCGCAGGTTTACCGGAACGTTTCAGTCCAATGCTGATGGCTCTGGAGCACGCAGGTTTAGCGATTACTTCAGATCAAATTAAAACGAGATTACTGGATATGAGTGTAGAAGGCGACGCATGCGACACGGTAGCGAATGCATTTGCCAGCAGAACAAATAACCGAAGATATCCAAAAGGTGGCGGCACTAGTTATGAACAAAGTGCGAAAACAGAAAATGTTCGACCGAAACCAAATCggaatgaaataatttgttatgGATGTCGGCAACCGGGACACTTCAAGAACAAATGTCCTAATTCAAATGTCAAACTGAACCACAAGAAAAAGGAAACAGCATCGAATGCCTTCAGTGCTGTGTTCCTTACATCGAATTTTGACAGGAAAGATTGGTACATAGATTCAGCGGCAACAAATCAcgtaacctcaaataaaaattggTTGACAAATATTCGAGAAGCTGAAATAGATGTTATTACTGTTGCTAATAATGAGCATCTAGCAGTAGAATGTAAGGGGCAAGTAAATATTACAACTCTTGtagataaacaaaaatttgacattGCTGTTAGGGACGTTTTATATGTCCCAAAACTTTCAACAAATCTTTTGTCTGTTTCCCAATTAACCAAGAAAGGCAACAGAGTTGTCTTCACTGAAGATGGTTGTCGAATATATAATTGTGATGGTTTATTGATTTCAACTGCAGATATAATCAACAACATGTACAAGCTTAACATGAATATGCCTGAAGAAACATTTGTGGCTGTTGCAGTGTCAAGCGATACCTGGCATAGACGTCTTGGCCATATAAATTACAGAGATCTTTTGTTGATGCAGGATATTGTTGAAGGAATTGATTTAAAAGGAAAACGATATAGCCCTCAATCATGTGACGTATGCTGTGAAGGCAAGCAATGTCGTTTACCCTTTAAGCATGTGGGTACTAGAGCAACGCAAGTGCTGGAAACAGTACATGCTGATTTGTGTGGACCAATGGAGGTAGGTTCTCTAGGAGGAtccaaatattattttctcCTTGAAGATGATTTTAGTAGAATGacctttgtttattttttaaaacacaaaaatgaagctttcaaatattttaaaatattcaaatctttGGTTGAAAACCAAACAAACAATAAGATAAAGGCATTCAGAACTGACAATGGAGGAGAATTTTGTTcttcagtttttgagaaattcttgtCTGAACATGGCATCATTCACCAGAAGACAAACCCCTACACACCTCAACAGAACGGCATGTGTGAACGTATGAATAGAACCTTGGTGGAAAAAGCACGGTGTCTACTTTTTGATGCTGGCCTCGATAAAAGTTTTTGGGCCGAAGCAGTTTACACTGCTGTTTATCTTCGGAATAGGTCAGTTGCAACAGGTTTAAAGAAGACACcatatgaaaatttcacaaaGAAGAAACCAGATATCAGCAACATTAGAATCTTTGGAAGCGAAGCTATGATGTTGATACCTGCAGAGAAGAGACGAAAGCTGGAtaggaaatcaaaaaaaatgATATTGGTCGGTTTTTGTGAAAATACCAAAGGATACAGACTATATGACCCAGAATCCAAGGTAATAATGACTAGCCGAGATgttattatcacagagaaaGTAGCTTATAGTCAAAACAGCTCAAATTTCCCATCAATAaacgaaaatattgaagaaacgcCAGTTTCAGTGGGGGAAAATGAAGATTCTATTCTCGAAACTGAATCTTTGAATAGTTCGGATGAATACAATCCAATGGAACATTTAACGAACACTGACTCGTCATACCTCCCAGAAGATTTTGAAGACTCCGAAGATGTTGTTCCAGTAAGAAAATCAAATCGAGCAAGAAAACCAAAACTGTTTGAGGATTTTGTTACGTATGCATGTTCGGCAAATGAGAATATGGAACTTGTGCCATCGAGTGTGACGGAGGCAATTTCTAGTCATGATGGAGGGATGTGGAAAAGTGCCATTGATGCAGAACTGAActcatttgaagaaaatgacGCATGGGAGCTAGGAGAGAAACCACAGAATGCAAGTGTTGTGCAGTGCAAGTGGGTGTTTAAACGCAAGCTCGATAGTGCGGGAAACGTAACTCATAGAGCTCGGTTAGTGGCAAAAGGGTTTACCCAGCAACGTGGTTTAGACTATGACGAAACTTTCTCGCCTGTTGTTAGGCATTCAAGTTTGAGATTGCTCATAGCCTTGTCTGTGCATTTAGAATTAAGAATAACACACCTTGACGTGACGACTGCTTTTTTGAATGGCTCTTTAAGTGAAACAGTATTTATGGTACAGCCTGATGGCTTCAATAAAAGTAAAGACAAGAGTAAAGTTCTACGATTAAAAAGAGCGATTTATGGTCTGAAGCAGTCCTCACGAGTATGGTATGAAAAGGTGGAGGAAATCTTGTTAACATTAGAATTTGTTAAATCTAAATTTGAGCCGTGCCTATTTATAAAAAAGAatggaaattttataataatgataGCTCTATATGTTGACGATTTCTTCGTTTTTTCAAACTGTGATCAAGAAACAATGCAATTAAAAAGTGAATTAGGctccaaatttaaaattaaagattTAGGTGACATCAAACAATGTCTTGGTGTCAGAGTTATTCataataagaaaaacaattgtATTAGTTTGGATCAAGAGCAATACATCGATTCGTTATTGTTTAGGTTTAAAATGGAAGATTGTAAGCCTGTGAACACTCCTATGGAATGTAATTTAAAACTAGAAAAAGGCAAAGAGAAGAATGATAATCTTCCTTATCAACAACTTATTGGAGGTTTAATGTACCTAGCAGTGCTCACAAGGCCAGACATTTCTTTCTCAGTGAGTTATTTGAGCCagttcaacaattgtttcgatgAAAGCCATTGGAAAGCTGCCAAAAGAGTACTACGATACTTAAAGGGCACAAAATGTAAAGGATTAGTATTCATGAAAAATGACGCAATACAGTTAGATGGTTATGTAGATGCCGATTGGGCTGCAAATACTATGGACAGAAAATCCTATAGTGGTTACTGTTTTAAAATCTGCGGTAGTATTGTATCGTGGGAAAGTCGAAAACAATGTTCGGTAGCTCTCTCAAGTACTGAGGCGGAGTATGTAGCCATTTCCGAAGCCTCGAGAGAAGCCATATACTTACGAAATATGCTTGGTGAACTTatgCCGAAAGTACGTTCTAGAACGACTAATAAAGCTAACTGGACTATGGACGATCTGGAAAGGGCTATAAAGCTCATCGTTGAACAGAATTATTCGATAAGAAAAGCCGCGAAGACTATGAATATTCCATTTGCCAGTCTTTACAAGaggtacaaaaaaaattttgataaggCACCTCGTCTCGGCCGTCAAACTGTTTTCACTCctgaaatagaaaaagaattCGCGGACCTAATCAAGAAAATGGCCAACATATTCTACGGCTGCACCCCGAATCAAATAAAAAGAGCAGCATTTGATACGCTGAAGCCCTAA
Protein Sequence: MAVNYISSVPRLLGRENFAEWSFATENFFILEGISECLTGKQTDSVMVAKAKAKLISTIDPSLYVHIRNRNTCKEVWDTLKNMYEDNGFTRKIGLLRTLISLRLESCSSMEAYVTQVIETARKLDRTGFHISEEWIGSLLLAGLPERFSPMLMALEHAGLAITSDQIKTRLLDMSVEGDACDTVANAFASRTNNRRYPKGGGTSYEQSAKTENVRPKPNRNEIICYGCRQPGHFKNKCPNSNVKLNHKKKETASNAFSAVFLTSNFDRKDWYIDSAATNHVTSNKNWLTNIREAEIDVITVANNEHLAVECKGQVNITTLVDKQKFDIAVRDVLYVPKLSTNLLSVSQLTKKGNRVVFTEDGCRIYNCDGLLISTADIINNMYKLNMNMPEETFVAVAVSSDTWHRRLGHINYRDLLLMQDIVEGIDLKGKRYSPQSCDVCCEGKQCRLPFKHVGTRATQVLETVHADLCGPMEVGSLGGSKYYFLLEDDFSRMTFVYFLKHKNEAFKYFKIFKSLVENQTNNKIKAFRTDNGGEFCSSVFEKFLSEHGIIHQKTNPYTPQQNGMCERMNRTLVEKARCLLFDAGLDKSFWAEAVYTAVYLRNRSVATGLKKTPYENFTKKKPDISNIRIFGSEAMMLIPAEKRRKLDRKSKKMILVGFCENTKGYRLYDPESKVIMTSRDVIITEKVAYSQNSSNFPSINENIEETPVSVGENEDSILETESLNSSDEYNPMEHLTNTDSSYLPEDFEDSEDVVPVRKSNRARKPKLFEDFVTYACSANENMELVPSSVTEAISSHDGGMWKSAIDAELNSFEENDAWELGEKPQNASVVQCKWVFKRKLDSAGNVTHRARLVAKGFTQQRGLDYDETFSPVVRHSSLRLLIALSVHLELRITHLDVTTAFLNGSLSETVFMVQPDGFNKSKDKSKVLRLKRAIYGLKQSSRVWYEKVEEILLTLEFVKSKFEPCLFIKKNGNFIIMIALYVDDFFVFSNCDQETMQLKSELGSKFKIKDLGDIKQCLGVRVIHNKKNNCISLDQEQYIDSLLFRFKMEDCKPVNTPMECNLKLEKGKEKNDNLPYQQLIGGLMYLAVLTRPDISFSVSYLSQFNNCFDESHWKAAKRVLRYLKGTKCKGLVFMKNDAIQLDGYVDADWAANTMDRKSYSGYCFKICGSIVSWESRKQCSVALSSTEAEYVAISEASREAIYLRNMLGELMPKVRSRTTNKANWTMDDLERAIKLIVEQNYSIRKAAKTMNIPFASLYKRYKKNFDKAPRLGRQTVFTPEIEKEFADLIKKMANIFYGCTPNQIKRAAFDTLKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -