Mdil017899.1
Basic Information
- Insect
- Megalocaria dilatata
- Gene Symbol
- -
- Assembly
- GCA_034642435.1
- Location
- CM067857.1:64860356-64861666[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-09 1.7e-06 28.8 0.0 4 37 15 48 13 54 0.89
Sequence Information
- Coding Sequence
- atGGCCGGCGTGAACTCAAAGCGAAAAGCATGGAATACGGAGCTTATGGCGGAAGCCATAAAATTAGTAAAGGAGAAAAAAATGGGTTATTTAAGAGCTGCAAAACATTTTAATGTGCCAAGATCTACCTTGTTTAGATTATGCCAGAAAAGTGAATTTTCTCCAGAAGAAGCCGCAGCTACTACACTCGGAAGGAAAACTGTCTTAGGGACAACCCTTGAAAATCTTTTAGTAGACTACATTTTGTCGATGGAGAGCAAATTTCATGGCTTGACGAGAAACGATGTTCGAAGAATGGCGTACATGTTAGCTAGACGTAATCAGTTGAAAAATCCATTTGGTGAGACTGGTATGGCTGGCAAAAAATGgcttaaattatttctaaaacgccaTAAGGATAAGCTATCAGTGAGAAGACCAACTGGCACGTCTTTTGCTAGAGCTTTTGGATTCAGCAAGGAAAAAGTAGACTCATTTTTTGATCTCCTCGAAGGCGTCTATGCTCAAGGAAACTATGGTCCAAGTCGTATATACAACGTAGATGAATCTGGGCTTACTGTAGTACAAAGCAAGATACCCCAAGTGATTGGGCATAGAGGAAAACGGCAGATAGCTTCACTTACCTCAGCGGAAAGGGGTTCATTAATGACGATTGTTGTTGCCATGAACGCCACTGGTCATTTTGTGCCTCCCTTTATTATATTCCCACGCAAGAATATGAGTGATCAGCTGATGAGAGGCTGTCCCCCAGGCTCTGTTGGCGTTGCACATCCATCCGGATGGATTCAAATGAACATATTCACTGAATGGTTCAAACATTTCATCAAACATACAAACCCTACTCCGGAATCGAAAGTATTACTTATCTTAGATGGTCATTTTTCTCACACTCGAAACATCGACGTGATAGAGCTTGCTAGGCAAAACAACGTAGAAATTGTCTCCTTACCTCCTCACACAACTCACAAGCTCCAGCCACTAGACAAAACGTTTATGGGACCACTAAAAACGTATTACAGTGAGGAAATACGCATGTGGATTAGAGATAATAATCGACCACTAAGCCCTTATGATGTTGTTGAGTTATTTGGCAGAGCGTATTTAAAAGTGCAAACTGGTGAGATTTCAACAAATGGATTTCGAGTAACTGGCTTATggccattgaataaaaatatattcaccgAGGTCGACTATCTTGCTGCGCAGCAAGATGCAGTTAAAGATGGTAATACGGTCAACGTTCCATCAGGTCACCAACCTGAAGGACCATCGATGGCCAATTTAAGAACATCTGATAACTGTATGCCTTAA
- Protein Sequence
- MAGVNSKRKAWNTELMAEAIKLVKEKKMGYLRAAKHFNVPRSTLFRLCQKSEFSPEEAAATTLGRKTVLGTTLENLLVDYILSMESKFHGLTRNDVRRMAYMLARRNQLKNPFGETGMAGKKWLKLFLKRHKDKLSVRRPTGTSFARAFGFSKEKVDSFFDLLEGVYAQGNYGPSRIYNVDESGLTVVQSKIPQVIGHRGKRQIASLTSAERGSLMTIVVAMNATGHFVPPFIIFPRKNMSDQLMRGCPPGSVGVAHPSGWIQMNIFTEWFKHFIKHTNPTPESKVLLILDGHFSHTRNIDVIELARQNNVEIVSLPPHTTHKLQPLDKTFMGPLKTYYSEEIRMWIRDNNRPLSPYDVVELFGRAYLKVQTGEISTNGFRVTGLWPLNKNIFTEVDYLAAQQDAVKDGNTVNVPSGHQPEGPSMANLRTSDNCMP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00704897; iTF_00443944; iTF_00965066; iTF_00965067; iTF_00965068; iTF_00965069; iTF_00965070; iTF_01055898; iTF_00423742;
- 90% Identity
- iTF_00965066; iTF_00965067; iTF_00965068; iTF_00965069; iTF_00965070; iTF_01055898;
- 80% Identity
- iTF_00965070;