Mdil003402.1
Basic Information
- Insect
- Megalocaria dilatata
- Gene Symbol
- -
- Assembly
- GCA_034642435.1
- Location
- CM067854.1:73079239-73081182[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.3e-14 6.3e-11 43.0 0.0 2 43 18 59 17 60 0.93
Sequence Information
- Coding Sequence
- aTGCCAAATAAGTATCAAAGAAAAGCTATTGCCTCTCGTGGCAACTGGAGTGAGGATCCGTTGAAAGCCGCTATTAAAAGCGTAAAAAATGGAGAATTGTCTGTATACAAAGCTTCTATCATCTATAACATACCTCGAAAAACACTTGAAAGACggtacaaaaataataatgataaaaaaggCCCAATGGGGCCCACGTCAATACTTGGGgatgaaaacgaaaaaaaacTTTCCAGTCATATTAAAATGATGCAAGAAAGAGGTTTCTTGTTGACAATGATGGATGTGAGGACAATTGCTTTTCAGTTTGTTGAACAGTTAAATATACAACACAGATTTAATCAATCAGAGCAAAGGGCCGGTTATGATTGGCTACAAATGTTTTTACGCAGAAACCCCGACATCGTTTTGAGGAAATCTAAAGGAGTATCACTGGCTCGATGTCAAGCTATGAACAGGGTTGAAGTGAATGGCTACTTTCTTTTACTCGAAAACATTTTGATAGAAAATGATTTAATGTCAAAACCTAACTGCATATTTAATATGGACGAGTCTGGATTGCAATTAAATAATCGTCCTGGACACGTACTTGCCGAGAGAGGCTCTAAAGCTGTATCCACTACGACATCGACTGAAAAGGGTGAGACCATTACTATCGTAGCTTGTTGCAATGCAGAAGGTATGTTTTTGCCACCGGCATGCATAATGAAGGGCAAGAACAAAAAAAGTGAATTTGAGGATGGAATGCCTCCTGGATCTCATGTCTTTATGTCAGAAAAATCTGGTCACATAACCTCAGTGATATTTTTAGACTGGCTCAAAATTCATTTCACGCCTAGGAAGCCAGCTGGTAAAGTTTTATTGTTGCTTGACGGACATTCCACTCATTGTAACTCAGTCGAAATGCTTGAATATGCTaatcaaaatgatataattttGCTATCTATGCCTAGCCACACCTCGCATTTTTTACAACCCCTTGATCGGGCTGTGTTTAAATCGTTGAAACACCATTTTTATGAACAATGCCGGCTATGGATAAATCAACATCAAGGTCGTCGCATTACAAGACTAACATTTGGTTCTCTGCTGCATAAAGCCTGGGGTAAAGCTGCTTCAACAGAAAACGCTATTTCTGGATTTAAGGCATGCGGCATCGTTCCCTTTAATCCAGAGGTAATTCCGGATTACGCTTTTTTTGACTCACCAGTTGTGCCTAACTCACCTCCTCGTTTAGCTACTCCGACTGTAATACCTTCTGATACACTCGAAGCTcaagaaaacattgaaaatgaaCCTATACCGGGTACATCAGCCGAACAAGACAAACACAATTGGACGCCGTCTCGAATTTTAAAAGAGATATCTCCTATTCCACAAAAGTTGATAGAGATCCGTAAACGTAGTAAGCAACTGGGTAAGCTTTTAACATCTAATGAGCATATTGCAATCAGAAAAAGAAAGGGAGAAGAAAaaacactgaaagaaaataagcGTAAAGTTAAGCTAGAAAAAAGTAACGTACCTAAAACCAAAGAAAGGAGTAACGTACCTAAAACCAAAGAAAGCAAGACTGATAAACCCACCACAGTAAGGAAACGTAGAGCGGTTAGACAGATTACAATGAGTAGCTCTGATGAAGATAGTGATGAACCAATGCTATGTGATACTTCGGACGACAAAGATGTAGAAAATGAAACGAATAACTGCGCGGCATGCGGCGAAGACTATTACAAAACACGTCTTGTTGAAGATTGGCTTCAATGTTTAGTTTGTGAAATGTGGGTACACGAAAATTGTACAGAATTTGACGATATGTGTTCAAAATGTGGACAGAAGAAAAAAACTGAACATAAACAAGGAAGAATTAGTGGAAAAGGAAAGGGAAAAGGGAAATCTAGCAGTGGCCATCTATCCCGTACACCTAAGGCCAACTCCCCCTGA
- Protein Sequence
- MPNKYQRKAIASRGNWSEDPLKAAIKSVKNGELSVYKASIIYNIPRKTLERRYKNNNDKKGPMGPTSILGDENEKKLSSHIKMMQERGFLLTMMDVRTIAFQFVEQLNIQHRFNQSEQRAGYDWLQMFLRRNPDIVLRKSKGVSLARCQAMNRVEVNGYFLLLENILIENDLMSKPNCIFNMDESGLQLNNRPGHVLAERGSKAVSTTTSTEKGETITIVACCNAEGMFLPPACIMKGKNKKSEFEDGMPPGSHVFMSEKSGHITSVIFLDWLKIHFTPRKPAGKVLLLLDGHSTHCNSVEMLEYANQNDIILLSMPSHTSHFLQPLDRAVFKSLKHHFYEQCRLWINQHQGRRITRLTFGSLLHKAWGKAASTENAISGFKACGIVPFNPEVIPDYAFFDSPVVPNSPPRLATPTVIPSDTLEAQENIENEPIPGTSAEQDKHNWTPSRILKEISPIPQKLIEIRKRSKQLGKLLTSNEHIAIRKRKGEEKTLKENKRKVKLEKSNVPKTKERSNVPKTKESKTDKPTTVRKRRAVRQITMSSSDEDSDEPMLCDTSDDKDVENETNNCAACGEDYYKTRLVEDWLQCLVCEMWVHENCTEFDDMCSKCGQKKKTEHKQGRISGKGKGKGKSSSGHLSRTPKANSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00965049; iTF_00965050; iTF_01166523; iTF_01491812; iTF_01491811; iTF_00889113;
- 90% Identity
- iTF_00965050; iTF_01166523;
- 80% Identity
- -