Basic Information

Insect: Megachile willughbiella
Gene Symbol: -
Assembly: GCA_945859635.1
Location: CAMAOE010000136.1:577159-579882[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.013 1.7 9.6 0.2 3 21 8 27 6 28 0.85

2 14 1.3 1.8e+02 3.3 0.0 2 20 34 52 33 54 0.90

3 14 0.71 92 4.2 0.4 1 12 237 248 237 257 0.89

4 14 0.01 1.3 10.0 3.1 1 23 367 389 367 389 0.97

5 14 0.00017 0.022 15.6 0.2 2 23 393 414 393 414 0.97

6 14 0.00035 0.045 14.6 1.9 1 23 425 447 425 447 0.97

7 14 0.026 3.5 8.7 0.1 1 23 466 487 466 487 0.76

8 14 0.0005 0.065 14.1 0.1 2 23 493 514 492 514 0.95

9 14 3.6e-05 0.0047 17.7 4.8 1 23 542 564 542 564 0.99

10 14 1.6e-06 0.0002 22.0 3.7 1 23 570 592 570 592 0.96

11 14 0.00083 0.11 13.4 3.9 3 23 600 620 598 620 0.97

12 14 1.1e-06 0.00014 22.5 0.8 1 23 626 648 626 648 0.98

13 14 6.9e-05 0.009 16.8 0.2 1 23 652 674 652 674 0.99

14 14 0.0003 0.039 14.8 0.2 1 23 682 704 682 704 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.013	1.7	9.6	0.2	3	21	8	27	6	28	0.85
2	14	1.3	1.8e+02	3.3	0.0	2	20	34	52	33	54	0.90
3	14	0.71	92	4.2	0.4	1	12	237	248	237	257	0.89
4	14	0.01	1.3	10.0	3.1	1	23	367	389	367	389	0.97
5	14	0.00017	0.022	15.6	0.2	2	23	393	414	393	414	0.97
6	14	0.00035	0.045	14.6	1.9	1	23	425	447	425	447	0.97
7	14	0.026	3.5	8.7	0.1	1	23	466	487	466	487	0.76
8	14	0.0005	0.065	14.1	0.1	2	23	493	514	492	514	0.95
9	14	3.6e-05	0.0047	17.7	4.8	1	23	542	564	542	564	0.99
10	14	1.6e-06	0.0002	22.0	3.7	1	23	570	592	570	592	0.96
11	14	0.00083	0.11	13.4	3.9	3	23	600	620	598	620	0.97
12	14	1.1e-06	0.00014	22.5	0.8	1	23	626	648	626	648	0.98
13	14	6.9e-05	0.009	16.8	0.2	1	23	652	674	652	674	0.99
14	14	0.0003	0.039	14.8	0.2	1	23	682	704	682	704	0.97

Sequence Information

Coding Sequence: ATGGGATCGTTGAACCTCGTTTGCCCAATGTGTTGTGGCGAAACGTTTAATAATCCACAATCGTTAAAGTACCATTTATTAAGCATGACGGACAACCTTTACTGTCCTGGTTGTTCGCAGCGATCCGACTCGGTAATGGCACTTATTCAGCATTTGGATCGGTGTGGACAGAACACTGAATTGGATGAGATGTGTGAGACTAAGCATGAACCCGAGCGAGAGACTCAGCATGAATCTGAACCGGACACAGAGGTGCTAATGGATACAAATGTTGAAGGAATAGATCAAAGCTTCTTGGCGACAGTAAATGATAGTGGAATCATGATAGTTGGTGGACCTCAAACTATACAAGTTGATGAAAATGGAGAGATCAAAGTCGTAGAAAAAATGGAAACTGAAGAGGTTGAAATGGAGCAAAATTCTTTGGAGTTTAAAATGACGGAAAAAGTTCCTATTACAACTGCTACTAAGGAAGTGAAAGAAAAGTCTTTATCCCAGGACCAACTAGTGACAATTTCTACATCAAAAACAGATGATAAAAGCAAAAACAAAAATATGATTACTATTTTACCTGACGGCTCCGAACTTCTTGATGGAGATACTGAAGCTCTGATAAATATGGATCATATAAATGATGTAGGTGAACTAGATGAGGATGGATTACTACATGTTAAGCAAGAGCTTTGTGAGATTGAACCAGAAGCAGTTTATAGTTGCACTAGTTGTGACATGAGTTTTAATTCTGTTGTGGAACATATAAAACAGTTTCACGATGGACAAGAAGTACTACTTGAAATAGCTGATCAATTAGATGATATACCAACAGTACCTGCAGCTAGTACCTTACCTTCAGAGTCAGGAAGCATGACAAATACTCGGCAGAGACAAAGTATGAATACGCTTCGTACCGAGGAGTGCGTAGACAGTGAGGGAAGATTATATACAAGAAAAGTAGTACAAATAGAAAGGTTCTGGGATAGAACTCCAGCTCAAACATCGAATCAATCTGCCAAGGCACCAATGATTGAAAAATTTTTTTCCAATGTGGAAGGAGTAAAAGTACGTGAAAAGAGATTGGAAGCCACTCCAGTAAGAATGTATAGATGTAATCAGTGCCTTCAACAATTCTCCAAATTAGGAAACTTTCGAGTCCACGCGTGTCTTCATGGCAATAATCGTTGTGATAGTTGTGATCAAACGTTTGCAACGCCTAAAGCATTACAATTGCACGCTAAGGTACATGAAGGTGAACCTGATCCGAATCAAAAAACCTTTATTTGTGAAACATGTGGTACAGAATTTGGTACGCATAAAAGTTTGCGTTTACATTCTCGAATGCATGCTCCCGTCAGAGCAAGACATGTCGATGCTCCCGAAGGAACAGCTAATGCAACATTTACGTGTCCTGAATGTGGTAAAACATTAGCAGAATCATACAAAGAAGCACACATGGCATTGCACTCTGGTGATTCTGTAACTTGTACAGTTTGCAATAGAAAATTTGATTCTGCTGATAGTTTAGCAATGCATGCTGCAGTACACACGGAACTTAGTCAGCCACATTCACCGACACCACCTGCAGTAGAAACTACAACAACTGAACCCACAGAAAATCAAAAACCGTATCAATGTCAACACTGTGGTCGAAGATTTACAAGACCTCACGAGAAAGTGAAACACGAGCGTATCCACACCGGAGAAAAACCACACGCTTGCGAAGTTTGCGGTAAAACGTTTCGCGTCTCTTATTGTTTAACATTGCATATGAGAACTCATACTGGCGTAAGACCATATGGATGTCAACATTGTGGTAAAAGATTTAAAGCTTCTTCCGTTTATAATCATCACTTGCTTACGCATGGAGAAGAACGTGCTTATACATGTCCATATTGTCCAAAAACGTTTAAAACACGTGTTCAACTTGCGGGACACAAGAACAGTCATACTAAACCGTTTCGTTGCACCGAGTGTTCCCGACCATTTGCTTCTTTGTATGCTGCGCGTGCTCATATACAAACTCATAAAAAAGACAACAATTTGAAGTTCAGTTGTTATATATGCGGTGCATCATATGGTAGAGCATTTGCGTTAAAAGACCACCTAAAACAGCACGGTCAAGATGTGTTGACTCCACCAGAACCAGCAAGAGAAGAAGAAATTCATGAGGGAGAAGAGTTTTTACTCGCGGAAGAAGAAGTAGAAGACGATGAGTTGGTTATACCGTCACCTTTACCCGTTGCACAGTCTTCAGAAGCTGACGATACAGAATGA
Protein Sequence: MGSLNLVCPMCCGETFNNPQSLKYHLLSMTDNLYCPGCSQRSDSVMALIQHLDRCGQNTELDEMCETKHEPERETQHESEPDTEVLMDTNVEGIDQSFLATVNDSGIMIVGGPQTIQVDENGEIKVVEKMETEEVEMEQNSLEFKMTEKVPITTATKEVKEKSLSQDQLVTISTSKTDDKSKNKNMITILPDGSELLDGDTEALINMDHINDVGELDEDGLLHVKQELCEIEPEAVYSCTSCDMSFNSVVEHIKQFHDGQEVLLEIADQLDDIPTVPAASTLPSESGSMTNTRQRQSMNTLRTEECVDSEGRLYTRKVVQIERFWDRTPAQTSNQSAKAPMIEKFFSNVEGVKVREKRLEATPVRMYRCNQCLQQFSKLGNFRVHACLHGNNRCDSCDQTFATPKALQLHAKVHEGEPDPNQKTFICETCGTEFGTHKSLRLHSRMHAPVRARHVDAPEGTANATFTCPECGKTLAESYKEAHMALHSGDSVTCTVCNRKFDSADSLAMHAAVHTELSQPHSPTPPAVETTTTEPTENQKPYQCQHCGRRFTRPHEKVKHERIHTGEKPHACEVCGKTFRVSYCLTLHMRTHTGVRPYGCQHCGKRFKASSVYNHHLLTHGEERAYTCPYCPKTFKTRVQLAGHKNSHTKPFRCTECSRPFASLYAARAHIQTHKKDNNLKFSCYICGASYGRAFALKDHLKQHGQDVLTPPEPAREEEIHEGEEFLLAEEEVEDDELVIPSPLPVAQSSEADDTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00625657;
90% Identity: iTF_00226756;
80% Identity: -