Mwil002829.1
Basic Information
- Insect
- Megachile willughbiella
- Gene Symbol
- -
- Assembly
- GCA_945859635.1
- Location
- CAMAOE010000010.1:4565779-4605203[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.033 4.3 8.4 0.1 2 23 49 70 48 70 0.97 2 28 0.00017 0.022 15.6 0.6 2 23 83 104 82 104 0.95 3 28 0.0003 0.039 14.8 1.1 1 23 110 132 110 132 0.98 4 28 1.4 1.8e+02 3.3 0.0 2 20 167 185 166 187 0.91 5 28 0.04 5.2 8.1 2.8 1 23 290 312 290 312 0.98 6 28 4.5e-06 0.00059 20.5 0.5 2 23 322 344 322 344 0.96 7 28 3.3 4.3e+02 2.1 0.2 1 13 425 437 425 439 0.84 8 28 0.0068 0.88 10.5 0.3 1 23 503 525 503 525 0.94 9 28 0.16 21 6.2 0.3 2 14 532 544 532 546 0.91 10 28 0.25 33 5.6 0.1 3 12 977 986 976 989 0.90 11 28 0.0038 0.5 11.3 2.5 2 23 1267 1288 1266 1288 0.94 12 28 8.5 1.1e+03 0.8 6.9 1 23 1326 1349 1326 1349 0.94 13 28 0.023 2.9 8.9 0.9 3 23 1354 1374 1352 1374 0.92 14 28 0.11 14 6.7 0.4 1 23 1382 1405 1382 1405 0.90 15 28 0.23 31 5.7 7.6 3 23 1469 1489 1468 1489 0.97 16 28 0.027 3.5 8.7 4.1 1 23 1497 1520 1497 1520 0.97 17 28 0.00074 0.096 13.6 0.2 1 23 1648 1671 1648 1671 0.94 18 28 0.0085 1.1 10.2 1.0 1 23 1677 1700 1677 1700 0.95 19 28 0.00033 0.042 14.7 2.2 1 23 1716 1739 1716 1739 0.97 20 28 0.21 27 5.9 4.2 1 23 1760 1783 1760 1783 0.97 21 28 9.2e-08 1.2e-05 25.9 3.0 2 23 1852 1873 1851 1873 0.97 22 28 0.024 3.2 8.8 2.7 1 23 1934 1957 1934 1957 0.92 23 28 1.7e-06 0.00022 21.9 0.9 1 23 1963 1986 1963 1986 0.96 24 28 0.0028 0.36 11.8 3.9 2 23 1992 2014 1991 2014 0.95 25 28 7.1e-05 0.0092 16.8 0.3 1 23 2019 2042 2019 2042 0.97 26 28 0.0064 0.83 10.6 3.5 5 23 2050 2068 2049 2068 0.97 27 28 0.0062 0.81 10.7 4.7 1 23 2074 2096 2074 2096 0.97 28 28 3.2e-06 0.00042 21.0 0.3 1 23 2102 2124 2102 2124 0.98
Sequence Information
- Coding Sequence
- ATGCTACCTCAGGATGAAGAGCAGGAATGCGGGGCGAACGAGATATTCGGTCAGGAAGAGACAGAAGAGCTTCTCATCACGGATGACAGTATGCACGTGCCTAAGGTGGAGAACGCAGAGGTGATCATCGCCGACGATATCATTCAGTGCCATCTCTGCGGAGACGGTTTCATAACGGAACAAGCTCTCGCTCTGCACCTAAAACTCCACGAAGAGGAGGAGGTTCCCGTTCAAGACGATCATTTAGTTTGCGAGCACTGCGGTTGCAGTTTCGTCACTGCGGCCGAGTTGTCCGACCACCAATTGGAACACGAAACGGACGATGCGTACAGTtgcgagacgtgcggtttcgtcaccgagcacagagagagcttgatcgctcaccagaaacggcacaacatcgactacaaAGCGAAAATCGTGAAGATTGCCCGGCCTGATGTCACAGAATCACCAACGGGAGATCCCGAAATCTCGAAAACTCGGACAGCATCGATCAGATGCGAGTCCTGCGACGAAGAGTTCGAAACAGAGGCTGTTCTACTGGTTCACAGAACCGAACGGTCGATTCTTCGAACCCGAGAAGCTCTGAAGAAGACCGAGAAGAAGTGCCAGGAGATCACCGTCGAGGAAATGAAAATCGAGCACATAGAAACGCTCGAAGGTATGGAATTGGTCAAGTACCAAAACGAGATATGCACCGTGGAGGAATTCGAAGACATCGGCCATCAGGAAATAGTGACCGACACTTTAGAGTACACGGAGAACGAGGAGATAAAAATCCTCGACGAAGACACCGAGATAGAGGCGGAAACGAACCGGCACTACGAGAACAAACACGAAGTGACCAAGAAGTACACGGTGATCTACGAGTGCGACATCTGCAACAAAAGAATGCGCAAGAAGCTGCAATTCCTGAAGCATAGGCAGAACCACCAAAGGAACATggagggaagttgcgaacgatgcgaggaatgcgacaaaaccttcgtcgacgaggagaagctgaagaagcacatgatcaaggtgcaccagaaggagaaaccgttccaGTCTGAGGAATGGGGATGTCCGAGGACCGGTGTCGACTTGCGCATACGAAAATTACCCACGGAAGTCTCGTTTAAAGATCAGCCGCCGAAGAATCAGTGCTTCATCAAAGAAGAACCAATAAGCAGCGACGAACTCCGTCCAGAAATTCCAAGTAATTGCGTGTCGAAGAACGAGGAGGAGATGTCCGATCCTTTGGCATTGCCGAAAATTCAAGCGTTctatcagtgcggcgtgtgcaacaagctGTACGACCGCACGTCCGAAGACTATTATCCGATGGCAATGTTGACGAAGCTCGAGCTGGTGAAAAAGGACACCAATACGGACACGGCGGCCAAGAAAAGCCCTAAATCATCGACGGGTAACGACACGACGCCGGCCAACAGCCAGCCGCAGAACTTCATCAAACAGGAGGTGAACGACGAGGACGACGAAGAGGATCTACCACTGGCGTACCACTGCAAGCTCTGCGGCGTGTTCTTCGCGTCTCAAGCCTTGCTGGACAATCACGAGATCGAGCACAAGGGTAAACGCAAGAACACCTGCGCCCAGTGTGGACGCGTGTTCCGAACGAGGTCGAAAGCGTCTCTGGGCCAGGGTACGAAAGACCGGGTGCCAATCGAGAGAAAAACTGTTGCAGCTACCAGCGAAGATCGATTTAGTACGTTGCTGATGAAAGTGGAAAGAGACTCCGAGGACGAAGAAGCGGAAGAGGAAGATCAGCTCGAAAGAGAAGTGGTAGCTCGCAAGGTCAACGAAGACTGGACAACGGATGCTGTGAAAACTGTTTTAGTGCCCGTTAGGGACCCAGTGACGCAACAGATCAGGAACATGTTGGTACCTGTCGAAGTGAGGGACAAAACTGGGTTAAACATGATCAAAAGTGTACTGGTACCGTTTCAGAGCAGCGATGGTTCGGTCTCGTACGAGATCAGGAAGGTGACAGTACCGATCACGATCGAGTCGAAGCTGCTGGAGAACGCTGACGACCCCAAAGAAACCGGGAAAGAGGACAACAAGGAGACCGATCGAAAAGAAGAGAAACAGGAAACAAGAAGCGTTGAGGAGGTGAACGTGAAAGTGGAGCAGTTCCTGGACGAAGAGACCAAGTCGAACGACAGTCCAGGATCCGAGGACAATTTCGAGGTGATGGATCAGACCCTGAggaacagttgtccgttgtgtcagaaGTCAGCGATTTCTGCTCAGAACTCGAAACGGCAGCTTCTTTCCTCTCATGGAAATAGAAAGAATAAAATGCCCAGGAAAATTGAAAGGGACGACGCCCTACAGAAAGAGAGAAAGAAAGTGAACAGTGACACAACGCTGAATTCGTGGCACATTGCGAGCACGCCTAACAGCGACCCTTTAAAAATCGAGGAGAACACTCCAGTGCCTGTAGAAAGAGATACAAATCCGTTCGAAGCCATATTGCTTCCGATTCACATCAAGGACGAACCTGTATCGAACGAAATCGTGGACCAAGCGGACGAAGCTGAAGAGAAACGAGAGAGGCCGAAGAGACCGCAACAGAAGAAGAAAACGAAGACGCAGAAAGAAGCTGAGCGTTCGTTCGCAAGCCTTTGGCGCACTGACATGCTATATCTTTGTTTCAGAGTACCAATTCCAAGACAGCGAATAAACCAAGACCCAAGTTCGTCTTACTACTTAATAGTTGTCGCGGCCAAACCTGAAGACAACGAAACAGCCGGAAAGTCTAAAACTGCGTCGACCAATTCGAATCAATCGAAAGACCCTCTGGAAGTGATCAAAGACCAGAACAAAGAAACGTCTCAGAATCAAGTGGCTGCAGGATCAGCTTCGCAgaaggccgaagcggaggtggacgaggtcctcgagaagatcaagaacatctgtccattttgcggcaaacacttcagcagtgccttgatagtggaggaccacgtcgcgttcgttcatcgcaagccgtacaaGTACAATGCGCTAGACCCCCTCGCTCCAACTTTTCTGATAGTAAAACTAGAGGACAATTACTTTCGGATACCAACGTCGCTGAGCATGTTCATGATGAAGGAACCACCACCCAGCGGAGAAGCGGTCGCTCAGGCTCCGAAATCAGCCCCGAAGACCAGTCGGACCGAAGAGAGGCCGAGAGCCAACTCTGTGAGGATCGACGAGTCGTCGGACGAACTGGAGGACGTGCCGTTGGACTTCCGGAAGAAGTTACAGGACGAAAAGCACATGAAATCGCTGCAGCTCATAAATCAGAAGCACAAACTCGGTAGCCAAGAAGATTCAAAACGCAAACCAGCCTCCCTTCTGCAGAGAAGAAGACTCTTACGAGTTTCGAAAATCCGCAGACGTAACAGACATTCCTACGAAACAAAAGATGGAAGTAATAGTGTTCAGCGGGAAGAAGCAAGCAAAAAGTCTTCGATCCGACGTTCGACCAGCAGGAAGCTACCCGATTCTAACGATTGTTCGGCTAAATTACAGAGCAACCCAACACAGCAGGAAGATCTGGATCGTGTTAGCTGCAAGAAGATGACCATTGGAACTTCCGGTCAACTTAGTGAAGACTCCGTCCCGACGCAGCAGGTCCACACCACGAAATCCAAAGAGAGCTCCGAAACGCCAACGACTATTTTCTTAAAGATGGACGGCGAAGAGCCGCGTAAAGACGTTCAGAAAACAAATTGCGAGACGAGTTCTTACGTTTCGGGTTCTCTGATACACCTCTGCGAAGTGAGCATCGATTACTGTATGTGCGACAAGTGTGGGATCAAGTTCCCCACCGAGAACATGCTGAACAAACACAAAATGTTCCACAAACTGCACTCGTGGATTCGCAAGAAACGTCTGCGTGCGAAGAATCAGCTAAAATCTTCGGGTAAACTAATCAAACAAACGAAGTCTCTGAAAATCCCCGAAAAGATGAAGTATGTCTGCATGTGCTGTAGCTTCACCTGCAACAGGAAGTCCACCATCACCATCCACATGAAAAAGAAACATTTAGAGATCTCGTGCATAATCTGCGACCTGAAATGCAACGATTACTCCACGTTGGCGAAGCACATGGAGAAACACAGGAACGCGAAGACAAAGTACTTCAAGTGCAACGTATGCAGCTTCGTTAGCAAGAAGAGGGGTGCTCTGGTGTCCCACGTGGTCCAAACGCATCGGAAGACTGATGACAAGAAGAAGAGGACGCCGACGAAGCGTGATGTCAAATCCAAGGAGAAGAAAGGTCCGGAAGAAGCAAAGGATCCGCTAATTGACTCGTGCACATCGTCAGAGTTCGACTGCAAGGACGAGGTGATATCAGAACCCGAGGACGACAAGAACTTCGACAAGGATCCTGTGGAACACTGCGACTTGTGTGACTTCACGTGTTCGAAGAGGAGCACCCTGTATTCGCACAAACGCAGGCACAAGGTGGACGTAGCTGAGGTGTATTTCTGCAACGAGTGTCCCTTCAAGACCAACAAGAAGTCGTCCCTGTATTCGCACAGGAAGAGGAAGCACAGACCACCTAAACCTCTCACGGAAGATGGCCAGCCACAGTTGTTCTACTgcgcccagtgcgactacaagaacaagaacaaGACTCTAAACGGGAACGGACGTTTCCTGTACGGCAAGGAATCGATCGCGATGCAACCGTGGCAGGTTGTCGACGTGGAAGGTAGCCTCTACTATGCCTTCCTTCCAGCGAACCAAGTGGAAACGGAGTTCACCAAACTGTCCGACAAATCTCCGGAAGCGCAACACAGGAACAGCGCCGAAGAGAAGACGTACACCGTCGACGAAGAAAAATCGTCCGTCGACGACGCGTGCACGGTGAAGATAAAGAAAGAGAACGCCGAGGACGCGTCCACGGACGACAAGCACGAGGAGGGCACCGTGTACGCCTGCAAGGAGTGCAACATCTCGTTCCCAGTTCTGCAGATGCTGAAGCGTCACAGAAACGCGGTGCACGAACAGGCACAGCGTTACAAATGCAAGGTCTGCCTGAAGGTCTGTCGCAGTCTGGTGGCCTTCAAGATGCACATCGCGTTGGAGCACAAAGAGGAGGAGGAGCAGAACCTGAAGGACGCGGAGAGCCTCACGTACACCTGCAACTTCTGCGACTACGAGAGCACCAATAAATCCACCCTGACCTCGCACATCAGCAGAAAGCACACGGGGAAAACTATAGACAGACGAAGAAGCAGTTATGGCTCCAGCACGGAACCGAAAGAGTACTCCTgcgacgagtgcgagttcaagtgccagaaccgaaggaagttgaaggaacacctggagcgtaagcatgcgtctgattacaaGCAACAGAATCATGTGCCCATTTCATCGCAAACTACAAAAAGCTCTACTGAAGAAAAATCATCACAGAAGGATAAACACATTACAAAAGAAAAACCATCACACAAGGACGAATCCGTCACAAAAACAAAACCGTCAGAAAAAGACAAGTCCGTCACAAAAAGAAAAGAATCACAACAGGAAACGTTGATGACCTGCAACGACTGTGGCAAAAAGTTCAAAAAGAAATATCTCCTACGACGACACATACGGACACACGAAACTCGAGATAAGAGAGAATCAACCCCCAAAACCTCTTCCCCCATACCCTCCCAGAAGGAGGAGTCTCTGTCTTGCCAGAGCTGCGATTTCAAATGCAATGAAATATTAACCATGATCGTCCACACGATCGAGAATCATAAAGGTTCCCGCAAACGCAAGCTCTCAAATAGCGAGAAGTTCCTGTGCACCATATGTGGACTGCTCTGTTCTCGAAAGGAAACCTTGAAGTCCCATTACGTGCGCAAACACACTCAGAGTTTcgagttcagctgcgaaatttgtggcaaggaattcaagatcaaaagtgatctaacaaggcacaccagactgaatcaccaggaaccaccagtggtgtgtgacgtgtgtggtaaaatgtgtccgaaccgtcacagcctgtacactcatcagaaacacgctcactataaagcgaaattcgagtgtcccgtgtgtcgcaggaggctggtgagcaaggagaacctggaacagcacataaagtcgcagcacgagaagaagaagtttgcgtgcaagtgtggcaaatcgttcttcgagaatcacgatttccagaaacacctgcgagtacacacgggtgtgagaccgtacagatgttcggtgtgctgtaaagcgtttagcacgcatagtagtctgagtcaacatttgttgctgcatacgggcgagaggatttatgagtgcgatgtttgcaacaaatcgttcgcgcagaaggcaggacttaccttgcacaggaagatacactcggagaagttaccgccgcttcCGGTCAAGCGCATCGATCACATTCTGAAGGAGTTCACGAAAGAGTGA
- Protein Sequence
- MLPQDEEQECGANEIFGQEETEELLITDDSMHVPKVENAEVIIADDIIQCHLCGDGFITEQALALHLKLHEEEEVPVQDDHLVCEHCGCSFVTAAELSDHQLEHETDDAYSCETCGFVTEHRESLIAHQKRHNIDYKAKIVKIARPDVTESPTGDPEISKTRTASIRCESCDEEFETEAVLLVHRTERSILRTREALKKTEKKCQEITVEEMKIEHIETLEGMELVKYQNEICTVEEFEDIGHQEIVTDTLEYTENEEIKILDEDTEIEAETNRHYENKHEVTKKYTVIYECDICNKRMRKKLQFLKHRQNHQRNMEGSCERCEECDKTFVDEEKLKKHMIKVHQKEKPFQSEEWGCPRTGVDLRIRKLPTEVSFKDQPPKNQCFIKEEPISSDELRPEIPSNCVSKNEEEMSDPLALPKIQAFYQCGVCNKLYDRTSEDYYPMAMLTKLELVKKDTNTDTAAKKSPKSSTGNDTTPANSQPQNFIKQEVNDEDDEEDLPLAYHCKLCGVFFASQALLDNHEIEHKGKRKNTCAQCGRVFRTRSKASLGQGTKDRVPIERKTVAATSEDRFSTLLMKVERDSEDEEAEEEDQLEREVVARKVNEDWTTDAVKTVLVPVRDPVTQQIRNMLVPVEVRDKTGLNMIKSVLVPFQSSDGSVSYEIRKVTVPITIESKLLENADDPKETGKEDNKETDRKEEKQETRSVEEVNVKVEQFLDEETKSNDSPGSEDNFEVMDQTLRNSCPLCQKSAISAQNSKRQLLSSHGNRKNKMPRKIERDDALQKERKKVNSDTTLNSWHIASTPNSDPLKIEENTPVPVERDTNPFEAILLPIHIKDEPVSNEIVDQADEAEEKRERPKRPQQKKKTKTQKEAERSFASLWRTDMLYLCFRVPIPRQRINQDPSSSYYLIVVAAKPEDNETAGKSKTASTNSNQSKDPLEVIKDQNKETSQNQVAAGSASQKAEAEVDEVLEKIKNICPFCGKHFSSALIVEDHVAFVHRKPYKYNALDPLAPTFLIVKLEDNYFRIPTSLSMFMMKEPPPSGEAVAQAPKSAPKTSRTEERPRANSVRIDESSDELEDVPLDFRKKLQDEKHMKSLQLINQKHKLGSQEDSKRKPASLLQRRRLLRVSKIRRRNRHSYETKDGSNSVQREEASKKSSIRRSTSRKLPDSNDCSAKLQSNPTQQEDLDRVSCKKMTIGTSGQLSEDSVPTQQVHTTKSKESSETPTTIFLKMDGEEPRKDVQKTNCETSSYVSGSLIHLCEVSIDYCMCDKCGIKFPTENMLNKHKMFHKLHSWIRKKRLRAKNQLKSSGKLIKQTKSLKIPEKMKYVCMCCSFTCNRKSTITIHMKKKHLEISCIICDLKCNDYSTLAKHMEKHRNAKTKYFKCNVCSFVSKKRGALVSHVVQTHRKTDDKKKRTPTKRDVKSKEKKGPEEAKDPLIDSCTSSEFDCKDEVISEPEDDKNFDKDPVEHCDLCDFTCSKRSTLYSHKRRHKVDVAEVYFCNECPFKTNKKSSLYSHRKRKHRPPKPLTEDGQPQLFYCAQCDYKNKNKTLNGNGRFLYGKESIAMQPWQVVDVEGSLYYAFLPANQVETEFTKLSDKSPEAQHRNSAEEKTYTVDEEKSSVDDACTVKIKKENAEDASTDDKHEEGTVYACKECNISFPVLQMLKRHRNAVHEQAQRYKCKVCLKVCRSLVAFKMHIALEHKEEEEQNLKDAESLTYTCNFCDYESTNKSTLTSHISRKHTGKTIDRRRSSYGSSTEPKEYSCDECEFKCQNRRKLKEHLERKHASDYKQQNHVPISSQTTKSSTEEKSSQKDKHITKEKPSHKDESVTKTKPSEKDKSVTKRKESQQETLMTCNDCGKKFKKKYLLRRHIRTHETRDKRESTPKTSSPIPSQKEESLSCQSCDFKCNEILTMIVHTIENHKGSRKRKLSNSEKFLCTICGLLCSRKETLKSHYVRKHTQSFEFSCEICGKEFKIKSDLTRHTRLNHQEPPVVCDVCGKMCPNRHSLYTHQKHAHYKAKFECPVCRRRLVSKENLEQHIKSQHEKKKFACKCGKSFFENHDFQKHLRVHTGVRPYRCSVCCKAFSTHSSLSQHLLLHTGERIYECDVCNKSFAQKAGLTLHRKIHSEKLPPLPVKRIDHILKEFTKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -