Basic Information

Gene Symbol
Trerf1
Assembly
GCA_945859635.1
Location
CAMAOE010000035.1:4672558-4688271[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.3 6.9e+03 -2.3 0.2 30 42 627 639 625 640 0.89
2 2 1.5e-10 1.1e-07 32.3 0.0 2 46 792 836 791 836 0.96

Sequence Information

Coding Sequence
ATGAAAGGGGCGTGGGGGAGGAATGGTTTTGATGGATCGGCCAACCTTACCGCAGCCGACACAAGCACAAATCAACAGCCCCGGACGAATATGACGGTTTTTACCACGCAAGCAGACAATGCGTCGCAGATTTCCGGCAAAACGAGTTTCGCGGTGCCAGCACCGCCGCCATTGGCCTCCGCGGACAAGGTTCGCAGACTTTCGGACGGCGAACACTTCCGGCAGCCCAACGTCACCGTTTCCGGCCACGCGACCGTGCAGAAACAGTTGCAAGAAGCGCAAACCCAGGCACAGGCGCAGGCGCTGGCCGACATTATTCTGAAGgggactaagatggctgtgaaaagaacaacttccgatcccggccagagactgcacttgacgtaccagccatcggttcagtcgacaaataatcagcaacaacagcagcagcaacagcaacagcagcaacaacagcaacagcagcagcagcaacaacaacaacaacagcagcaaaataatcaacctcaagcacagcccgcagttacagacagtttctctatgactggttattctgaagacggtggttatttcagtccaagtctgcAAGATGAAGTGTTCCAGCAAGTCACCGCTGTTCCTGACAGTGTTCTGCTTCATGCTACTCAGTTGGATTCTCTTCAGTTTCAGACCGCGAGTCTGCTGCAAGAACAATCGACGGAGCAACTGCAGGACATTACTCTGGAGGATCGATACTCGTCGCAGCACACGGTGAACCCGGACCTGCAGGCGTTGGTCAACTCTCCATTACCCGATTCACTGGCCGAATTCAGTACTTATGGTGCCCAGTACACAGAAAGTCCACATACCTTGCCCGCACAATCCCCGTTGCCGTCACCATTGACCAGACACGACAGTCCCAGTTTCACATATCCAACACCTCCAGCGAGTCAAGAGGGTCTCCTGACGGGTAGTTTTCCTCTGTTGAGCCCGCAAGAGGACCCAGAAAGCGTCAGACAAGTGTCGTCGCCTTTATCCGCGGCTTTCTACACGACAACCATGTCATCCGCGGCGGCTGTCGAGGAAGCGCTCAGCGAAGTGTTGCCGGCCGAATCGGAAGCGGACGCGGATCTGTACGGTTCCGGTTCGCCAAATCCGCATTCGCCACTGCCAAGTCCTTTGTCCGCGACCCCAGCACCGTCGCCGTTGTCGTCGTTGCCGCCATCGTCGGTCTCCTCGCCAGGACCAGTGTCGTTCACGGGCACCAGCTTCCCGGTATCTCCCCACCACGCTCTGCAGAGTCAGATGATGCCTAACTCGGAGGATCCGTTGCTCTCCTCGACCCCGAAGGACTTCACCACCGCCAGTCGAAGACGGTTCGAGTTTCAGTCGTACAAGTTCATCGCCAGCCAGAACTTGGTGGACTTCGGTCTGGGCAACGGCAGTCTGGCGGGGATCGTGGTGGACAACAACGGCGAGTTCAAGCTGATACAAACGGCCGGGTTGCAGAAGACGAACGTGTTGGTTCAGACGGGCTCCCTGAGCCCGGCTCTCACCTTCAAGAAGGAGATGCGACTGACGACGCCCAAGGTGGAGCCCGTCACCGTGAACCTGGGCCTGAACGTGCACACCAACCATCAGTACAACGCTGGACAGTTCAACCAACAGCAACTAGTGAACCCGGCCAAGTTCCTCATCCAGACGAACCCGGCCAAGAACTGTAACTTCAGACAGAAGACACCCAGCGGTAGCAGTTTGCCGATCCCCGTGGAGCAGATCAAGGAAGAGCTACTCGACGAAGACGTGTTCCTTAATCCCAGCAACGTACCCGCTGGAAGCCCGGTCAGACAGTGCAGGAAAAGGCCGCGTATGGACGGGAACTTGTACGCCAATCATTCGTATCCATCGAGATTGAGGAAGGCCTGCGATCGCCATTGGGACAGCAGTTACACACCGCCGCCCATATTGGACCCGTCCCGTCCTGGACCTGGACTGTACGCCAGGTTGCATCAGTACGAGAGGGACTCCGACTTCAGCTCGGACGATTCCCAAGGGAACGATGGACCTCCGCCTAGGATCAACATCGGGACGAGGTATCAAGCTACTATACCGCCTGTGGGAAGTGACGGCGACAGAGGAAAGGGAGAGCCGGAAGCTGATCATCTGCTGTGGGACCCTGGTATAAATAACGTGCTGACGGATAATGAACTGGAGATGTATCTGCAATTTGCATGCTGCGCTGCGGTGCCTGGTGGAGGAAGAAACAAAGAGTATGCTCTTCATCTGCTGCACATGTGCAGGGGAAACATTCATGAGGCGATGCTGAAGCTGATGAGACCAACGCCATTATTGCCAGCTGAACATCCATTGCTCAGTTACGAGTGTCACGAGTCCGACCGATGGACGTCGCAGGAAATGGACGCTTTCTATCAGGGTCTGCTGAAGTACAACAAAGACTTCTCCGCGATTTCGCGGGACGTGGCTGGCAAATCGGCGAAACAATGCGTGCAATTCTATTACCTGTGGAAGAGGCTCTGTCCGGACGAATACAAGAGGCTGCGTGTTCGCCATGGCAAACCAAAGATTAAGACAGAGAGCAAGGATTGCAAGGACACCAGGGAACTTCGCGACGCCATCGCGTCTGTCACGGAGATGGACTTCAGCGAGGACAAATCGATTCTCCACCGCACCCTGTTACAGACAAACGAAAGAGAAAATTCGGCTACCCTAACCACCAGCGATGGAGAGCTGAGATTATTTGCATACGATTGCCCAGATAGCTTTAGCGGAAGCGTAACAGTAACGATGGCCGGGAGCACCCAAACCGCCCAAACCGGCAATACCGGCCACGCCACAGTCAACACCAACTCACAAACTCACACTAGTTCTGAGCAACAACTACCCGTGCCCACCCCACTTCACTACCCCTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCAGAAGCGCGCACATGAAATCGCACAGGCCGGTGCCCTCGCCCGATTCAACGGGTCAGGAAtctaagaggcctgtccagcagcagtcgaaggtgcagcagtcgcagcagtccaatcagcgccagcagcagcaacaacagcaaccgcagcagcaatcaccgcagcaacagcaacaacagcagcaacaacaatcgagcagcgtatcaccgcaggcccaagactacaatcagcagcaactgccttccagcaatggcgacaccggagctcagaagccagcccatttatggcacaacccgacaCGGCTTAGGCCACCATAG
Protein Sequence
MKGAWGRNGFDGSANLTAADTSTNQQPRTNMTVFTTQADNASQISGKTSFAVPAPPPLASADKVRRLSDGEHFRQPNVTVSGHATVQKQLQEAQTQAQAQALADIILKGTKMAVKRTTSDPGQRLHLTYQPSVQSTNNQQQQQQQQQQQQQQQQQQQQQQQQQQQNNQPQAQPAVTDSFSMTGYSEDGGYFSPSLQDEVFQQVTAVPDSVLLHATQLDSLQFQTASLLQEQSTEQLQDITLEDRYSSQHTVNPDLQALVNSPLPDSLAEFSTYGAQYTESPHTLPAQSPLPSPLTRHDSPSFTYPTPPASQEGLLTGSFPLLSPQEDPESVRQVSSPLSAAFYTTTMSSAAAVEEALSEVLPAESEADADLYGSGSPNPHSPLPSPLSATPAPSPLSSLPPSSVSSPGPVSFTGTSFPVSPHHALQSQMMPNSEDPLLSSTPKDFTTASRRRFEFQSYKFIASQNLVDFGLGNGSLAGIVVDNNGEFKLIQTAGLQKTNVLVQTGSLSPALTFKKEMRLTTPKVEPVTVNLGLNVHTNHQYNAGQFNQQQLVNPAKFLIQTNPAKNCNFRQKTPSGSSLPIPVEQIKEELLDEDVFLNPSNVPAGSPVRQCRKRPRMDGNLYANHSYPSRLRKACDRHWDSSYTPPPILDPSRPGPGLYARLHQYERDSDFSSDDSQGNDGPPPRINIGTRYQATIPPVGSDGDRGKGEPEADHLLWDPGINNVLTDNELEMYLQFACCAAVPGGGRNKEYALHLLHMCRGNIHEAMLKLMRPTPLLPAEHPLLSYECHESDRWTSQEMDAFYQGLLKYNKDFSAISRDVAGKSAKQCVQFYYLWKRLCPDEYKRLRVRHGKPKIKTESKDCKDTRELRDAIASVTEMDFSEDKSILHRTLLQTNERENSATLTTSDGELRLFAYDCPDSFSGSVTVTMAGSTQTAQTGNTGHATVNTNSQTHTSSEQQLPVPTPLHYPCKICGKVFNKVKSRSAHMKSHRPVPSPDSTGQESKRPVQQQSKVQQSQQSNQRQQQQQQQPQQQSPQQQQQQQQQQSSSVSPQAQDYNQQQLPSSNGDTGAQKPAHLWHNPTRLRPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01068231;
90% Identity
iTF_00142129;
80% Identity
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