Basic Information

Insect: Megachile ligniseca
Gene Symbol: ttk
Assembly: GCA_945859565.1
Location: CAMAOB010000203.1:127911-140010[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 6.8e-08 7e-06 26.5 1.9 1 23 614 636 614 636 0.98

2 8 2.7e-05 0.0028 18.3 2.0 1 23 642 664 642 664 0.98

3 8 1.7e-06 0.00018 22.1 0.3 2 23 673 694 673 694 0.98

4 8 1.7e-05 0.0018 19.0 0.2 3 23 702 722 700 722 0.97

5 8 1.8e-07 1.8e-05 25.2 3.0 1 23 728 750 728 750 0.98

6 8 3e-06 0.00031 21.3 0.7 1 23 756 778 756 778 0.98

7 8 6.5e-05 0.0067 17.2 7.5 1 23 784 806 784 806 0.98

8 8 0.00072 0.075 13.9 1.0 1 21 812 832 812 833 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	6.8e-08	7e-06	26.5	1.9	1	23	614	636	614	636	0.98
2	8	2.7e-05	0.0028	18.3	2.0	1	23	642	664	642	664	0.98
3	8	1.7e-06	0.00018	22.1	0.3	2	23	673	694	673	694	0.98
4	8	1.7e-05	0.0018	19.0	0.2	3	23	702	722	700	722	0.97
5	8	1.8e-07	1.8e-05	25.2	3.0	1	23	728	750	728	750	0.98
6	8	3e-06	0.00031	21.3	0.7	1	23	756	778	756	778	0.98
7	8	6.5e-05	0.0067	17.2	7.5	1	23	784	806	784	806	0.98
8	8	0.00072	0.075	13.9	1.0	1	21	812	832	812	833	0.94

Sequence Information

Coding Sequence: ATGATGGGAGAGGTGATTCGCGTAGCTGGAAGGACACCGGACGTTGGGGAATTCCTTAAGGAGGCGATGCTGTCCCAAAGATTCGCCGACGTTGCTCTCTGTTGTCCGGGTGGTCAAAGATTCTTGGCTCATCGTTTGGTTCTTTCAGCTGCCAGCCCTTATTTGCAAGAAGTGTTGTTGGCTCACAGCAGAACGTCGTCGCATTGCGAGCCGATCACGGTGATTTTAGCCGAGGTGGAGGCGCCAGAACTGGCGGCCATCCTTGGTTTCGTGTACACCGGAAGCGCGACGGTACCTCGTCTTCGGTTGAACGCTTTTCTGCGCGCTGCCGAGGCTCTCCGCATCAGACTGCCTCCTGTACCGGTCGTGATGACTTGCTCGCAAGCGGACTGTAAACAAGAAGACATCAAAGACGTGAAGATCAACCCGAAGTACCTGCGCTGCGATCAATATCCATGCTGCGACGGCTGGTACCGTCCTGGGAGAAATCAAGATGGAGATTCTACGAGCAAAGAGGAACCGTATCCACCGATCGAGTCCTTGGAAACCGCAAGAGAAATCAGACCGCTTCCTGAATCGATGAACTTCGTTGAATCGAGATACGGAGCTGGAAAATATTGCTCTAGCACGTTCTGGTCCGTTCCACCGCCGCCATTTTCGAATCTCGAACACGAGAAGAACGTTGAACGTTTCTCTAAACGCGAAACGAATCGAACCGTGGTACCTGTCGTCGATGGGATCGACTCGATGTCCGGTGGACATACGGAAAACCTTCGAGTCTGTGATTCGTCTATCGAACATCGTCAACGGGAACTCTGTTTCTCGAGAACCTTCTACGATAGACAATTGGAACCGTTCGAATCGAGGATGAAGACTGATCAGAATCCTGGAAAAGATTTCGCGATGTACGATCGTTGCTTAGAGCAAGAGAGGGCTCCTGTGATTCGTTCCCGAGTCGAACGGTGTCAGGATGGGAACACCGTTTCACCCGATCGGATCAGATTCTTCGAAAAGTCAGATCACGGCGAAGATTTGTCGTGTCAGGAAGGTTGTTTGCTTTGGAAATCACCCAGGAGACACGTGGCCAACCGTGTCACTGCTTCGCCATGGAAACAGACCGTCAGACCTTACCACTTGCCCAAGTTACAGCCTATCGTTCTTCAACCTGGACTTCCTCTTCGATGTGCCGACGATGCGAATGAAGTCGGTGAAAAACTTGGTCCAACGGAAACGACGCGAGTAACCTCTGGCAGTTTGAATCTACAGTTAGCGAAAAATGCAGCATCTAACGATCTCTACTACGACCTCGAAGTTCCTATCGTCCACGAAGCCGCGTACAGTAATAATACTCGAACATTGGAAGATAATAGTTCGGGAACAAAACAACAGGAGTTTTATTCGGTCGAAATCCCGATATCGACTACCGCTCGAATCGCTCCGTCGATCAATAACGAATTGAGAAACAACGAATCTCATTTACAGGTTGAAAACAGCGCGATTTCAATCGCGACGAGGTGTATATCGATCGTTAACGAGAACCGTGAATCGAACGTCAATCGAAAGACTAGTTATTTCGGAGCAGTGTTACAGCATCCGGTCCAAAAGCCGGAAATTTCTCATCCCGTTAGTAGATTGTGCGATACGATCGACTCGAACGATACGAACGATACGAACGATACGAACGATCGTTTCGCGACAGCGGAAACGGGAAAAGAGGCGCGCATCGACGACGATAAGGTTGCCGAGCGAGTGATCAGAAATAGCGACAACAATAACAACGACGCGATCATTGGTAACGATATTTCTCAGCACGGTAGACCCGTTACGATTCAGGAAAATCATCGATGCGACCAGTGTGGCAAGACTTTCGTCACCAGAGCATCCTTGAAGGTACACATCAGAacgcactcgggagagaagccgtttcgttgcgccgattgtggcaagcaattttctcagctgcgaaactacaagtatcatagaagcgttcacgagggtaccagagaattcgcggccacctgtccagaatgcggtaaatacttcaacgatcgtggctacctgagctctcacatgaagatccatcgtaatcggaaagaatacggatgcaccgaatgcgggaaaagcttcaatcaacgggtcgcttacaatatgcacgtgaggatacataccggcgtgaaaccgcatcaatgcgaacagtgcggcaaagctttctccagaaagatgctgttgaaacaacatttaaggacccactcgggtgaaagaccgtatcagtgtcaagtctgccagaaggctttcgctgatcgctcgaacatgacgttgcacacgagacttcattccggattgaaaccgtatcaatgtacactgtgttcgaaagcgttcacgaagaagcatcatctcaagactcatctcaactaccacaccggcaccaagccatactcttgtccaaattgtgctctacgattttcacagagcagcaatatgagaacccatttcaaaaagtgtacCGTTAACAATTCAGCCGAAACGATAAGTACACGAACGGAGAGCAATATCGTCGACTCGTCCAAGGATGCACAGGTAAGGATAATATCGAGGACACCTACGGATACTTTGACACCGCCGAATTCGGATCAAGAATTAAGTATTTTAACGCCTATTTCCAAGATCACCGGAATCGAAGTAACCGGGACGTAG
Protein Sequence: MMGEVIRVAGRTPDVGEFLKEAMLSQRFADVALCCPGGQRFLAHRLVLSAASPYLQEVLLAHSRTSSHCEPITVILAEVEAPELAAILGFVYTGSATVPRLRLNAFLRAAEALRIRLPPVPVVMTCSQADCKQEDIKDVKINPKYLRCDQYPCCDGWYRPGRNQDGDSTSKEEPYPPIESLETAREIRPLPESMNFVESRYGAGKYCSSTFWSVPPPPFSNLEHEKNVERFSKRETNRTVVPVVDGIDSMSGGHTENLRVCDSSIEHRQRELCFSRTFYDRQLEPFESRMKTDQNPGKDFAMYDRCLEQERAPVIRSRVERCQDGNTVSPDRIRFFEKSDHGEDLSCQEGCLLWKSPRRHVANRVTASPWKQTVRPYHLPKLQPIVLQPGLPLRCADDANEVGEKLGPTETTRVTSGSLNLQLAKNAASNDLYYDLEVPIVHEAAYSNNTRTLEDNSSGTKQQEFYSVEIPISTTARIAPSINNELRNNESHLQVENSAISIATRCISIVNENRESNVNRKTSYFGAVLQHPVQKPEISHPVSRLCDTIDSNDTNDTNDTNDRFATAETGKEARIDDDKVAERVIRNSDNNNNDAIIGNDISQHGRPVTIQENHRCDQCGKTFVTRASLKVHIRTHSGEKPFRCADCGKQFSQLRNYKYHRSVHEGTREFAATCPECGKYFNDRGYLSSHMKIHRNRKEYGCTECGKSFNQRVAYNMHVRIHTGVKPHQCEQCGKAFSRKMLLKQHLRTHSGERPYQCQVCQKAFADRSNMTLHTRLHSGLKPYQCTLCSKAFTKKHHLKTHLNYHTGTKPYSCPNCALRFSQSSNMRTHFKKCTVNNSAETISTRTESNIVDSSKDAQVRIISRTPTDTLTPPNSDQELSILTPISKITGIEVTGT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00963996;
90% Identity: iTF_00963996;
80% Identity: iTF_00963309;