Mlig012640.1
Basic Information
- Insect
- Megachile ligniseca
- Gene Symbol
- mbr-1
- Assembly
- GCA_945859565.1
- Location
- CAMAOB010000085.1:500845-501192[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.5e-10 1.4e-06 28.2 0.0 3 40 14 51 12 56 0.88
Sequence Information
- Coding Sequence
- ATGCCTCCTATCAAAGGTGCTTTTAGAAATTATTCTGTAGAAGCGATGAAGGCAGCGATTGAAGATGTTAAGTTACGGAAAATGCCTATAAGAACAGCAGCACGAAAATTCGGCGTGCCAAGAATAACTCTAAAATATAAGATAGAAGGTAAGTCACCTATAGAAAGAAACATGGGACCTCCTCCAATTTTAAACAAAATAGAGGAGAATGAAATATCTCAATGGATTGAGGAAATGGCTGCTGCGGGTTTTCCAATAACACCTGATGAATTTATAACCAGTGTCCAGCGCTTCATAAAAGAAGCGGAACGTTCAAATCCATTTAAAAATGGATTGAAAAGATTTTAG
- Protein Sequence
- MPPIKGAFRNYSVEAMKAAIEDVKLRKMPIRTAARKFGVPRITLKYKIEGKSPIERNMGPPPILNKIEENEISQWIEEMAAAGFPITPDEFITSVQRFIKEAERSNPFKNGLKRF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00117922; iTF_01498118;
- 90% Identity
- iTF_00117922;
- 80% Identity
- -