Basic Information

Gene Symbol
KDM5A
Assembly
GCA_963576845.1
Location
OY756256.1:7914879-7924821[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-25 9.3e-22 78.2 0.0 2 89 109 192 108 192 0.94
2 2 4.3 1.5e+04 -2.6 0.1 49 81 821 851 818 855 0.64

Sequence Information

Coding Sequence
ATGGTATCGAGGTTCGACACGAACTTCGGCTGTGAGGATTTTTTCGGGACTTATCATTGCACTCGAGACATGGCTTGTGATCGTGGTGATTCGGACTTCGAGTTCGTTACACCGCCAGAGGCGCCGGTCTTCGAACCAAGTATCGAAGAGTTTCACGACCCTCTTAGCTACATCGCAAAAATACGACCGATCGCGGAGAAGTCTGGCATTTGTAAGATCAAACCGCCGCCTAACTGGCAACCACCATTCGCTGTTGATGTTGATAAATTCAAATTTGTTCCAAGAATACAAAGATTAAATGAGCTAGAAGCAaaaacaagaataaaacttAATTTCTTGgaccaaattgcaaaattttgggAGCTTCAGGGTTCTTCATTAAAAATTCCTCTTGTGGAGCGCAAAGCTCTTGATTTATATTCGCTACATAAGATAGTAACTGATGAAGGTGGAATTGAAACGGTAACAAGGGAAAGAagatgggcaaaaattgcaaataaattggGTTATCCTTCTGGACGTAGTGTTGGGAGTATTCTAAAAAATCATTATGAAAGAATTTTATATCCATTTGATGTTTTTAAACAAGGCAAAGCATTGACAGACATTaaaattgagCCAGATTCCAATGTAAATGAGAAAAAAGACAGAGACTATAAACCACATGGAATCATATCAAGGCAGCAAATCAAACCTCCAACTGAAAAATTTTCACGCCGATCAAAGAGGTTCAGCGGTCAGGAGGAAAAACAAGAAGTATCTATTAAACAGGAAGATTGTAAAGAAGAATGTGATTCTGATAATGATTTTAAAGATGGACTTAGAAGTAAGCATTTTGATGACAATAGCAAAGAGCTTaaaaagttacaattttatgGAGCTGGTCCAAAAATGGCTGGATTTAATACCAAAGAAGGAAAGAAATCGAATAAAACCAGGGGGGTGAAGCTTGTTTATGAATTTGATCCTTTGGCAAAATATATCTGTCATAATTGTGGAAGAGGTGACAACGAAGAAAGTATGCTTTTATGTGATGGGTGCGATGACAGTTATCACACTTTCTGTCTTATGCCACCGTTAACAGAAATACCAAAAGGTGATTGGAGGTGTCCAAAATGTGTTGCCGAAGAAGTTTCTAAGCCAATGGAAGCTTTTGGGTTTGAACAAGCTCAGAGGGAATATACACTTCAGCAATTTGGAGAAATGGCTGATCAGTTCAAGAGTGATTATTTTAACATGCCTGTACATATGGTGCCAACATCTTTGGTAGAAAAGGAATTTTGGCGAATAGTTTCTTCAATTGATGAAGATGTAACAGTTGAATATGGAGCAGATTTACACACCATGGATCATGGATCTGGATTTCCAACAAAAACGAgtgttaatttatttacatgTGACCAGGAATATGCAGAATcttcttggaatttgaataatttaccaGTTTTACGTAGTAGTGTCCTAGGTCATATTAATGCTGACATAAGTGGTATGAAGGTACCATGGATGTATGTTGGCATGTGTTTTGCCACATTCTGCTGGCATAATGAAGATCATTGGAGCTACTCAATTAATTACTTGCATTGGGGAGAGCCAAAAACATGGTATGGTGTACCAGGCTCACAAGCAGAAAAGTTTGAACAATCAATGAAATCTGCTGCACCAGAATTGTTTCATAGTCAGCCAGATTTACTTCATCAATTAGTAACTATTATGAACCCTAATATATTAACAAATGAAGGAGTTCCAGTATTTAGAACTGATCAACATGCAGGTGAATTCGTGGTAACATTTCCGCGAGCGTATCATGCCGGCTTTAATCAAGGCTATAATTTCGCTGAAGCTGTAAATTTTGCACCTGCAGATTGGcTCAAAATCGGACGGGAGTGTATATCGCATTATTCAAATTTACGACGATTCTGTGTATTTTCTCATGATGAATTAGTATGCAAAATGTCATTGGATCCAGATTCACTAGACATAGGAATTGCAACTGCAACCTATCATGATATGCTTCAAATGGTGGATGATgagaaaaaattaagaaaaaacttATTGGAATGGGGTGTAACGGAAGCAGAACGCGAAGCATTTGAACTTTTACCGGATGACGAAAGACAGTGTGAAGTGTGCAAGACAACTTGCTTTTTGAGTGCAGTTACATGTTCATGTCACAGTTCCCAGTTAGTTTGCTTAAGACATTTCACAGAACTTTGTGACTGTCCTCCAGAAAGGCATACATTACGTTATCGTTATACTTTGGACGAATTACCAAttatgttacaaaaattaaaattaaaagcagAGTCATTTGACTCATGGGTGACAAAAGTAAAAGAAGCAATGGATCCTGATAAGAAAAGTGACAAGATTGAACTTAATGAGTTGAAAGAATTATTGAATGAAGCAGAAAGTAAAAAGTTTCCAGACAGTGAATTGTTAACTGCTTTAACAACTGCTGTACAAGATGCTGAAAAATGTGCAAGTGTTGCACAACAACTTTTGAACAACAAACAGCGTACTagAACTAGGCAATCTGTTGAAACTAAATATAAGCTTACAGTAGAGGAGTTAACACTTTTCTACAAAGAAATTACAAATCTGTGCTGTGAACTGAAGGAATCTGATGGAGTTAAATTTATACTTGATCAAGTATTACAGTTTCAAAAAGAAGCAGAGGAATTTGAATCTAAAGAGGATGATTGTGATATTGAACAACTGGAAAAATGTATTGATTTTGGAGATTCTATTTGTATTGAACTACCTCAACTTGTTCGTTTAAAACAAaaattagCACAAATACAGTGGCTGGAAGAAGTCAAATCTGTTCAGGAAGACCCTAAATCTATACATCGTGATGACTTAGCAAAACTGATCGAAAAAGGCATGACAATACCTCCTCATTTAAGTATAGAAAATACACTTTCTGAGTTACAAGCATTAATGCTTGCGATCGACAACTGGGAGGAAAAAGCAAAATTATATCTTCATACAAAAAATAGACAAACTATTACGTCCCTTGAAGAGTTTATTGGGGAGGCTGATAAGGTAGAAGCTTATTTACCAAGCTTAGATGTTCTTCAAGACACATTGAATAAAGCAAAAAATTGGTCGAAGATGGTGGAAGAAGTACAAGCGAGAGATAACTTTccatattataatacattagaTGATTTAATTAAGCGGGGTAGAAATATCCCATTGCATCTAGATTCTCTTCCAATCTTAGAATCGACTCTTTCCCAAGCAAAAACTTGGAAGGAAAGAACGGCACGAACATTCCTAAGGAAAAATTCACATTACACTCTAATGGAAGCTTTGTCGCCAAGAATTGGAGTCGGTATACAAGCACTGAAAtctaagaaaaataaaagtgaaGAGTCTGTAGGACCTGTTTTCGTCTGTGATACAAAATTGGACGATTCCAATGACTCGGCTACCATTGTAGCCGCATTTAAATCAGCTGAACAACGTGAAATGGAAGCGATGAGAAATTTAAGGGagagaaatttaatgaaaaccGAAATAGAAGATTCGAGGTATTGCGTTTGTCGTCGACCAAGGTTTGGACTCATGCTTCAGTGTGAGCTTTGCAAAGATTGGTTCCATTctAACTGTGTACCTCTTCCGAAAACATCGTATAAGGGAAAGTTACCGATGTCAAGGGAAATTAAGTTTCTATGTCCTTGTTGTTTACGTTCACGACGGCCAAGATTGGAGACAATTTTGGCTCTCCTAGTTAGTCTTCAAAAAATTCCAATCCGTTTACCAGAGGGTGAAGCTTTGCAATGTTTAACAGAACGTGCAATGAATTGGCAGGATCGAGCCCGGCAAGCACTGGCTACAGATGAAATCTCATCAGCACTGGCAAAATTATCGGTACTGTCACAGAAGTTAGTCGAAGCAGCAGCGCGagaaaaaacggaaaagatTATTAGTAGTGAGTTAAAGAAGGCGGCAAATAATCCTGAACTTCATCAAAGGGTACAGGCGATTGCACCGCTTAGCGGTGTGCATTCGGATGACAGCATGCTCAGTACTGCAGACGATGACGACGATGTTGTTACTATAGATGACGACGAGCCAAGTTGTAGTACATTCAACAGCAATGAACATGCATATTCCTATATATCCAAAATTCAGCGCAAGTCCCAATCGAGTGACTCGAACGAGGTCGCAGTTGTGCTATCACAAGCTGCAAGGTTACGTCTAGAAGAACTGATGATGGAAGGCGATTTATTAGAGGTCGCACTAGACGAAACACAACACATCTGGCGTATATTAAGTCACACAAATAGTCCAAGTACTGTTCGAAAGTACGCATCGTACGAGGAAGTTCAAACTAATTTAAATCAAGATACGAGGGACGTGAGAAAACGAGGAAGGAAAAGAAAATCCGAggaatttgaattattaaaaaagctCGGAAGACAAAAGATGGAGGAAAAAAATTTAGCGAAACGTAAGGGACTGCAGAAGGAGAAAAAATCTGCCGGTTCTCCGGTGCCAATAAAACGTGGACCTCGAAAGATGAAACGGAAGGAGGGTGAAGAAGGTCCAAAGAAAAGGGGTGGCAATAGGAAAAAGACGAAGCAGGATACATCTGATGAAGAAGACGACTGCGCTGCTGTTAATTGTCTACGACCCAGCGGTAGGGAAGTAGACTGGGTCCAATGTGATGGTGGCTGTGAGGGTTGGTTCCATATGCATTGCGTTGGTTTGGATCGTACAGAAATAGCAGAAGAAGATGACTACATATGCAGTAATTGTAAAGAGGCCGAACAGAACTCAACGTCAAGAGCGCCAGATCCCCTAGCTGAATCATTAGGCCTGGATGCACTTCTTTCCCTTTCTCAATCTCAGGGATACCAAGGCACAGACAGCGAGGCAGACATTCAAGAAACGACGTCCTTCGTCAGAACCTACTAG
Protein Sequence
MVSRFDTNFGCEDFFGTYHCTRDMACDRGDSDFEFVTPPEAPVFEPSIEEFHDPLSYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIETVTRERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKALTDIKIEPDSNVNEKKDRDYKPHGIISRQQIKPPTEKFSRRSKRFSGQEEKQEVSIKQEDCKEECDSDNDFKDGLRSKHFDDNSKELKKLQFYGAGPKMAGFNTKEGKKSNKTRGVKLVYEFDPLAKYICHNCGRGDNEESMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRSSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAEKFEQSMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRECISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEVCKTTCFLSAVTCSCHSSQLVCLRHFTELCDCPPERHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPDKKSDKIELNELKELLNEAESKKFPDSELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVETKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQKEAEEFESKEDDCDIEQLEKCIDFGDSICIELPQLVRLKQKLAQIQWLEEVKSVQEDPKSIHRDDLAKLIEKGMTIPPHLSIENTLSELQALMLAIDNWEEKAKLYLHTKNRQTITSLEEFIGEADKVEAYLPSLDVLQDTLNKAKNWSKMVEEVQARDNFPYYNTLDDLIKRGRNIPLHLDSLPILESTLSQAKTWKERTARTFLRKNSHYTLMEALSPRIGVGIQALKSKKNKSEESVGPVFVCDTKLDDSNDSATIVAAFKSAEQREMEAMRNLRERNLMKTEIEDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTSYKGKLPMSREIKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATDEISSALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSMLSTADDDDDVVTIDDDEPSCSTFNSNEHAYSYISKIQRKSQSSDSNEVAVVLSQAARLRLEELMMEGDLLEVALDETQHIWRILSHTNSPSTVRKYASYEEVQTNLNQDTRDVRKRGRKRKSEEFELLKKLGRQKMEEKNLAKRKGLQKEKKSAGSPVPIKRGPRKMKRKEGEEGPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPSGREVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKEAEQNSTSRAPDPLAESLGLDALLSLSQSQGYQGTDSEADIQETTSFVRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00873598;
90% Identity
iTF_00141055;
80% Identity
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