Mfla007607.1
Basic Information
- Insect
- Mecyna flavalis
- Gene Symbol
- nfxl1
- Assembly
- GCA_949319885.1
- Location
- OX439415.1:1078695-1081169[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 3 3.4e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 18 0.076 8.8e+02 1.0 0.3 4 10 169 175 168 177 0.95 3 18 4.7e-07 0.0053 17.6 15.9 3 19 186 202 185 202 0.95 4 18 2.3e-08 0.00026 21.9 12.7 3 19 239 255 237 255 0.92 5 18 2 2.3e+04 -3.5 1.8 6 10 280 284 279 284 0.89 6 18 5.3e-10 6.1e-06 27.1 11.6 1 19 290 308 290 308 0.99 7 18 8.6e-07 0.0098 16.8 18.2 3 19 345 361 344 361 0.93 8 18 3 3.4e+04 -5.3 2.2 5 10 384 389 384 389 0.88 9 18 1e-05 0.12 13.4 19.0 1 18 395 412 395 413 0.97 10 18 4.8e-10 5.5e-06 27.2 12.2 1 19 422 440 422 440 0.99 11 18 0.0024 27 5.8 8.8 10 19 489 498 486 498 0.91 12 18 0.093 1.1e+03 0.7 6.8 3 12 509 518 508 518 0.90 13 18 0.66 7.6e+03 -2.0 3.2 15 18 548 551 547 552 0.84 14 18 0.36 4.1e+03 -1.2 0.2 7 11 567 571 567 572 0.87 15 18 4.1e-05 0.47 11.4 6.3 1 11 588 598 588 599 0.96 16 18 0.73 8.4e+03 -2.1 1.5 14 18 612 616 612 617 0.85 17 18 0.0012 14 6.8 13.2 4 18 630 645 628 646 0.84 18 18 2e-05 0.23 12.4 11.4 1 15 687 700 687 707 0.90
Sequence Information
- Coding Sequence
- ATGGCGCGGCGTTACCGCGACGTCGCTGCAAAGATGCAGGAAAACGTCCAGAAACATTTACAAGAGATGAAAGAACTATCTTCTTCTGAAGATGAGGAGCCATTTGAATCAGACGTGCTGGATGGAGTGTTCCAGAGCTACAGGCGTGGCGGGGGCGACACGAACATGCTGGACCGGACCAAACATCTGCTTGAAGAAGCTATTAGTGTTCGGTCGGTAACATGCCTTATATGCATTGCCTCTATAAAGCGAGCCGACGCGATTTGGACGTGCGATCACTGCTTTTCATACTTCCATCTGCTGTGCATACAGAAATGGGGCAACGACAGCGTAAGCCTGCGTCAGGAAGAAGCTCAAGGGCCTATTTCAGTCGTAAAACATAGAAAAGTAGAGTGGTGTTGCCCCAAATGCCGACATTCGTACACTAAAGAGGAAATACCTCGCAGATATAGGTGCTTTTGCAGTAAAACTGATGATCCTCCACACCATCCCTGGCTTATACCACATTCATGTGGCGAGGTGTGTGGAAAACCTCTGTCTACGGGAGATAAttgtaaacacaaatgtttgcttCTTTGCCACCCTGGGCCGTGTCCTCCATGCCCCCAAACCGTAAATGGAGCGTGCTACTGTGAGAAGGAAGTTAAGAAAGTACGATGTAGTTCTGCAAAATGGTCATGCGGACAACAGTGTAAAAAGTTATTGCTTTGCAAATCGCACAATTGTGAAAATTTGTGCCACAGTGGCGACTGCCCGCCATGCAGCTATGTTAGCGTGCAATCATGTAACTGTGGTGCTGAGAAAACTAAACGTCCATGTAGTGACCCAGAGTGGCAGTGCAAAAAGGTTTGCAACAAACCATTCTCTTGTGGATATCATAAATGTGATGAAGTATGCCATAAAGGAGAATGTGACTCCTGCCCATATTCCGGTATGCGTTCTTGCCCATGTGGAGCGAACCGTCGCTTCGTCCAATGTCCAGATATAATGGAAACTTGCCTTGGCACTTGTAACAAGAAACACAACCAGTGTGAACATACGTGCCCTGAGAAGTGTCATAGAGGCCCGTGTCCTCCATGTCAAGTCCTGATAGAGAAGAGTTGTCAATGTGAATCCCACACTAGAATGCTGCCATGCAGTAAGGAATACAAATGCGAAACGAAGTGCCGAGGAGTAAGACCATGTGGAAAGCACGGCTGCAGTCGTAAATGTTGCAACGGAAACTGTCCACCTTGTGAAAAAATATGTGACAAACCTCTCCAGTGTGGACGCCATAAGTGTGCAATGGTTTGCCATAGAGGACCATGCTATCCTTGTCCAAGAGAATCCAAAGTTACCTGTCGTTGCAAGGAAACATACATTACGGTGCTCTGCGGCAGAGAGAAACAGACCAAACCTCCAAAATGCAGCTTGCCATGCAAATTCAAATACAAATGTGGTCACGTTGACGAAAATAAACACCACTGCCATTTCGGAGACTGCCCCCCTTGTAAAGCAGTCTGCAAGAAGCCTTACCCAAAATGCCAGCATTTTTGCAAGTCCACTTGTCACGAATTCGTTCCTGTTGTATTTAAGGCTGTCGAAAAACCAGCAACGCCGTGGGAGATAGTTCCTCCGCAAACTAAAATTATGACGTTAAAATGCCCTCCGTGCGAGATACCTGTCCCTGTCATGTGTATTGGGGGTCATGAGGAGACCCAGCAGCCCTGTCACATGGCTAAATCGCGCTGTTGCGGCAGAAAATGCGGCCGCCCACTCTCCTGCGGCAACCATACTTGTGGACTACCTTGTCACGTCATCTTAGTAGACGCAAACTTCCCGAATGTGCCTTCTAATTGTAAACCTTGTGATAGAGAGTGCAAACGCCCCCGTCCACAGAGGTGCACTCACAAATGCTCCATTGGAGTATGCCATCCGGGTTACTGCCCACCGTGCGAGGTCATGGAACGACTGCGTTGCTACTGTGGCATCACCGAACTGTATCTACGTTGTCGTGATCTATCAACGATGACTGAGGAAATGTTGTCTTGCAAGCAGCAGTGCTCAAAGAATTTGGAGTGTGGCCATCGCTGCAGAAACATCTGCCATCCTGGGTCTTGCGTCACAGGACAAGTCTGCACCAAAAAGACTAAAGTATACTGCCGATGTGGAAACTTGAAACGAGAAGCTCCATGCAATTTGGCTCGGAATAGAGAGGTAATGGTTGTATGTGACTCAAGCTGCGAAGCTAAGAAGGCTGCTATTCAATTGGAGAAAGAGAAAGTAGAGCGGAAACTTAAAGAGCTGGAAGAGGAAAAGAATCGTAAGGAATTGGCTGAGTATGAGTGGAAGTTGAGcggtaaaaagaaaaaatataaggaaAAGAAGGTTACGATGAACGAAGATAATAGAAGTCTGTGGAAGAAATACTGGATTCCTATATTGTCGATTGTAATAGGTAGTGTAGGAGCTCTCTATATGATGGTTGATTTTTAA
- Protein Sequence
- MARRYRDVAAKMQENVQKHLQEMKELSSSEDEEPFESDVLDGVFQSYRRGGGDTNMLDRTKHLLEEAISVRSVTCLICIASIKRADAIWTCDHCFSYFHLLCIQKWGNDSVSLRQEEAQGPISVVKHRKVEWCCPKCRHSYTKEEIPRRYRCFCSKTDDPPHHPWLIPHSCGEVCGKPLSTGDNCKHKCLLLCHPGPCPPCPQTVNGACYCEKEVKKVRCSSAKWSCGQQCKKLLLCKSHNCENLCHSGDCPPCSYVSVQSCNCGAEKTKRPCSDPEWQCKKVCNKPFSCGYHKCDEVCHKGECDSCPYSGMRSCPCGANRRFVQCPDIMETCLGTCNKKHNQCEHTCPEKCHRGPCPPCQVLIEKSCQCESHTRMLPCSKEYKCETKCRGVRPCGKHGCSRKCCNGNCPPCEKICDKPLQCGRHKCAMVCHRGPCYPCPRESKVTCRCKETYITVLCGREKQTKPPKCSLPCKFKYKCGHVDENKHHCHFGDCPPCKAVCKKPYPKCQHFCKSTCHEFVPVVFKAVEKPATPWEIVPPQTKIMTLKCPPCEIPVPVMCIGGHEETQQPCHMAKSRCCGRKCGRPLSCGNHTCGLPCHVILVDANFPNVPSNCKPCDRECKRPRPQRCTHKCSIGVCHPGYCPPCEVMERLRCYCGITELYLRCRDLSTMTEEMLSCKQQCSKNLECGHRCRNICHPGSCVTGQVCTKKTKVYCRCGNLKREAPCNLARNREVMVVCDSSCEAKKAAIQLEKEKVERKLKELEEEKNRKELAEYEWKLSGKKKKYKEKKVTMNEDNRSLWKKYWIPILSIVIGSVGALYMMVDF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01072124;
- 90% Identity
- -
- 80% Identity
- -