Basic Information

Gene Symbol
Gatad1
Assembly
GCA_949319885.1
Location
OX439417.1:99195-100546[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.3e-09 1.7e-05 25.3 3.8 1 30 6 33 6 38 0.93

Sequence Information

Coding Sequence
ATGCCCAAACCAACATGTGTTCAATGCGGTACAAACGATTCATTGCTTTGGCGAGGCGCAGAGAACGGTCAAATATGTAACGAGTGTCACCTTTCGAACACTGCGACTAAAGAAGCCAAGCCAGAAAGTTCTGTAAAGACTGAAGTTGATGTTAAAGAGGAAAAAGAAGACAGTGAGGGGAAGAACGGGAAGAATGAAGGCGAGTCGACGCCGGCGAAGGCTACAGGGAAAGGCACGCGAAAGAGTACGAGGTCGACTCGATATAAGCCGAAGACGCCGGCTCCGGCGCCATCAGCAAAGCCGCCCGCCCCTCGCGGCCGCGGCCGGAGAAGCATCTTCAAACGACAGCCAGTCAAAGCGCCCACGGCCACCGCCACGGTTGTCACTAGTGACTCAGTATTTTATAAGGGAACATACATGCAAGTTGGTGACATAGTATCCATGACAGACCTGGAAGGAGACATCTACTACGCACAGATCCGCGGCTTCATGACGGACCAGTACTGCGAGAAGAGTGCTGTGGTCACCTGGCTGCTGCCCACTACGGCCAGTCCCCCACCAGAGAAGGGTTTTGACCCTGCCACTTACATTATTGgTCCAGAAGAAGAACTGGCCAGAAAGTTGGATGTGATGGAATTTGTGATGCATGCACCATCTGATTATTACAAAGCCAAAAATAGCCCTTACCCCCCAGTCGACAGTGAGCTCAACAACTACAATGGATTCATTTGGACTTCACTTGAACCTAAGGAGAGAACCCAGCCATTATAA
Protein Sequence
MPKPTCVQCGTNDSLLWRGAENGQICNECHLSNTATKEAKPESSVKTEVDVKEEKEDSEGKNGKNEGESTPAKATGKGTRKSTRSTRYKPKTPAPAPSAKPPAPRGRGRRSIFKRQPVKAPTATATVVTSDSVFYKGTYMQVGDIVSMTDLEGDIYYAQIRGFMTDQYCEKSAVVTWLLPTTASPPPEKGFDPATYIIGPEEELARKLDVMEFVMHAPSDYYKAKNSPYPPVDSELNNYNGFIWTSLEPKERTQPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00683847;
90% Identity
iTF_00408954;
80% Identity
-