Basic Information

Insect: Mecyna flavalis
Gene Symbol: -
Assembly: GCA_949319885.1
Location: OX439428.1:14652983-14662045[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 8.4 7.4e+02 1.9 0.3 1 23 52 75 52 75 0.93

2 19 0.092 8.1 8.0 2.1 1 23 82 105 82 105 0.97

3 19 0.0024 0.21 13.0 1.1 2 23 214 235 213 235 0.98

4 19 5.5 4.8e+02 2.4 2.6 1 23 241 263 241 264 0.94

5 19 0.16 14 7.3 4.1 2 22 499 519 498 519 0.96

6 19 4 3.5e+02 2.9 1.0 1 23 618 640 618 640 0.82

7 19 2.3 2e+02 3.6 0.3 2 23 771 792 770 792 0.95

8 19 0.0035 0.31 12.5 1.1 2 23 867 888 866 888 0.96

9 19 0.47 41 5.8 1.5 1 23 896 918 896 918 0.95

10 19 0.15 14 7.3 3.3 1 23 953 975 953 975 0.95

11 19 0.00028 0.025 15.9 4.0 1 23 983 1005 983 1005 0.99

12 19 0.17 15 7.2 1.9 1 23 1080 1102 1080 1102 0.99

13 19 6.9 6.1e+02 2.1 0.2 1 23 1186 1208 1186 1208 0.93

14 19 0.013 1.1 10.7 0.4 1 23 1274 1296 1274 1296 0.93

15 19 0.015 1.4 10.5 1.1 1 23 1302 1324 1302 1324 0.96

16 19 0.0078 0.69 11.4 2.6 1 23 1414 1436 1414 1436 0.97

17 19 0.0002 0.017 16.4 1.4 1 23 1442 1464 1442 1464 0.99

18 19 0.92 81 4.9 2.0 1 23 1556 1578 1556 1578 0.96

19 19 0.011 1 10.9 5.6 1 23 1589 1611 1589 1611 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	8.4	7.4e+02	1.9	0.3	1	23	52	75	52	75	0.93
2	19	0.092	8.1	8.0	2.1	1	23	82	105	82	105	0.97
3	19	0.0024	0.21	13.0	1.1	2	23	214	235	213	235	0.98
4	19	5.5	4.8e+02	2.4	2.6	1	23	241	263	241	264	0.94
5	19	0.16	14	7.3	4.1	2	22	499	519	498	519	0.96
6	19	4	3.5e+02	2.9	1.0	1	23	618	640	618	640	0.82
7	19	2.3	2e+02	3.6	0.3	2	23	771	792	770	792	0.95
8	19	0.0035	0.31	12.5	1.1	2	23	867	888	866	888	0.96
9	19	0.47	41	5.8	1.5	1	23	896	918	896	918	0.95
10	19	0.15	14	7.3	3.3	1	23	953	975	953	975	0.95
11	19	0.00028	0.025	15.9	4.0	1	23	983	1005	983	1005	0.99
12	19	0.17	15	7.2	1.9	1	23	1080	1102	1080	1102	0.99
13	19	6.9	6.1e+02	2.1	0.2	1	23	1186	1208	1186	1208	0.93
14	19	0.013	1.1	10.7	0.4	1	23	1274	1296	1274	1296	0.93
15	19	0.015	1.4	10.5	1.1	1	23	1302	1324	1302	1324	0.96
16	19	0.0078	0.69	11.4	2.6	1	23	1414	1436	1414	1436	0.97
17	19	0.0002	0.017	16.4	1.4	1	23	1442	1464	1442	1464	0.99
18	19	0.92	81	4.9	2.0	1	23	1556	1578	1556	1578	0.96
19	19	0.011	1	10.9	5.6	1	23	1589	1611	1589	1611	0.98

Sequence Information

Coding Sequence: ATGCTCCAGCAGATGTCCTCGCCGTCGAACGTGCAAGTCGGCGAGGTCGCCACTCTTGTGCGCCCCTACGAAGGCCGCCTGTGCGGCGAACCGTCGTCGGAGGAGGCCTCCGCCGAGGAGTCTGACTTACCGCAGTGTAAGATAAGGAGGAATTACAACTGTGCCAAGTGCACATTCTACACACAAAATCCGCGCGCTTTCCTCGCTCACGCGCGTGACGTGCACTTCGAGAAGTTCAAAATATATGACTGCCCCAGTTGCGTGTACGCTTCTAGGCATCACCAGAAACTTATAAGACACATAAAGATGGTCCACGGATCGGCATCGAATCCCGCCAAGATGGAAGTAGAACTACCCGCGGCCGCACCGGATACTGCGGAGCCGGTAGAGCGGATAGAAGACATGGTCGAAGAAGTTGAAGAATGCGACGACATTGAAATTGACGTCGACGATTGCATCGAGGAGGTTTCGGATCGTTCGCCTGATACAGAAAACGAGGACAAATCTATGGCCGACGACAGCGGCCTTCCGCTATTAAAAAGTGACGAGAAATATTTTTCTTGCACCAAATGCAGCTATGCGACCCACATAAAAGCGCGGTTCACGAAGCACGTCAAGTATCACTCGATGCCACTGAACAAGTGTACCATTTGCGATTTTCGATCGCCTTACAAATGGAATTTAGATCGTCATATGAAGAATCACGGTGGGAGCGGAAGTTTCAAGTGCTTCATGTGTAACTTCACGGCAGACATCAAGCAGAGTCTGACGTCACACGAACTGAATCATCACACGCCGCCCGCGGGCCAATCGGTTGTCAGTCGCCGCCGCAACCGGGTGGGCGCCAGCGACATTATGAACGCACTCATCCTCAAGGAGGATGAAGGGAGCGGCGACTCGCGGTCCTCGTACTCGGCCTCGGATATGGGTTTGCAGGGTGTAGAAAAAGATATGATAAGCTGCAACAGCGATTCCAATGATGCTGCCTCTGACACAACAAGTAAAAAAGATGTCATGCTTGCAGCGCAAAGCGAACACTCTCCCAACTCCGCTACAGATGACGCCAAATCTCAGAAACATAACAGGAAAATTCCCAGACCATTACCACAGCTTATACCGCTCCACGCGTCAACACCCACTCAAAACAAAACACCACCTGGAGAGCCGCCTTCGAAGAAATTCAAAGAAAGCCCAAGTTCTGACTTGCCGGATATAAATAAAGGAAATAAGTTCGAAAACTTACCTGTTGATATCACTCTTATACCAGTAAATAACATTCCTAAAGAAAACGTAGGACGGAAGAAAAATGAATCGTTTTTCGATAAACTCAAAGAAAGGCTTTTAACGGAAACTGGTGAAGAAGGTTCTCTTAAATGCAAAAATTGTGGTTTCGAAAGTAAGTGTTTATCCGAGCATTCGGTACACGAGAAAAATTGCACTTCCCAATTAAACCGAACAGCTACAAACACATTGCTTCCAAGTTTGAGTTCCACGCGTTGCCAAAACTGCAGACATCGATGTAAATCCAGCGCAGATCTATTTATACATATGAAAACATGTAGAAAGAATGAAAAAAATGAAGAAGATGCTTCTAACGAAATAAAAAGTCAAGATAGCAATGACGAACTAATTCCGATTCAAGAAAGAGAGATAGAACCGCACCCGATGGAAAACGTCGTATTTGTATGGAATAATATTCCACATAATGCAAATAAATTCAATACACCGCTAGACATAAATATTAACGACGATTCTACTCTCCCTGAAGCAAATAGAAGTTATGATTCTGAATTAGCTGAAGataacgaaggcatgaatctctCTCCAAGTCAGGCTATTGGCAAAAAAGTATTCAAATGTCCACATTGTCCATTTTGGGCATCGACTGCATCAAGATTTCATGTTCATATTGTGGGACACCTGAATAAGAAACCTTTTAAGTGCTCACTCTGTAAATACAAATCAAACTGGCGTTGGGATATCACCAAACACATAAAATTAAAGTCTGCAAGAGACCCAGAACATCATGAGGCAAAAGTTCTTATGACTGATGAGACTGGTCGCCGAAATTACAGCAAATACAACAAATTTTTGGCTATGTCAGTCAATGACGGCGGGAACACCGTATTTCATTATCTCGATTCTGCCCCAATTGCTACTCGAGAAAGTATTGATTCATTCAACGATACGAGTGATTTTAATCAGTCATTCGATATGCCTCTTAATCTCCAGATGCACAATAACGAGCTAAAACTCGATTCATTCGACAGTGGTATACAAGACCAGAAAAAGCCCAAGAAAACACTGTGGAAATGCCGAAAATGTAATTACAGGGATCCATCAAAGGAGGCGTTGCTGGAGCACGTACGAGAACACGCCAACGAGGTGTCGTTCGATGACCACAAAGCCAAGAAACCGGACAACATGCCCGACCCAGCCGATTTAGCCTACCGCTGCGGCCACTGCAACCAACTCTCCAACTGGAAACATGTCATACAGAGACACTGCCGCTTGAAGCACGACGGTGTGATAAAGGTGATCACCACAGTTAAACCAAAACCAGATCCAGGCCTAACTTTGAGCGAAATTAACACCGATACATGTAACAAGTGTCCCTTCAAAACAAGCGACAAAAAGCAGCTACTCGCGCATCTGCAACAGCATCAACCGTCGCCGCTATCAATATTTAAATGCTTCTTCTGTCCCTTCTTTGTAAAGGATGAACATGAATTAGTTCAACATCTTGTTCTGCATGGCGTCACTGAACCGGAAGAATACATTGCAAAGGCGATGGGCCGCAAATCTCCACTGCCCGAACCTGGAGCCAACACCACTCCCGGTACATCAACAAAGCGTCATAAATGTTCAGAGTGTCCTTACGAAACTAACAGCAAGTCTCAATATATGTATCACGAGCAGTTTCATCGGCTTCCTGCCGACACGCCTTACAAGTGCCCTGAATGCAATTACAGCGTATCCAAAAGACACTTGCTACATCAACATTTGAGGGTTCATGGAATTATTACAAAGAAACTTGAATCTGAATTTGAAGCAAAAGCGGAAGCAAGAGTTGAGATAAACTTGGATGAAATACCTTTCGTGTGGGTTTCTgctaaaaatgaatttcataaAATGTACAAATGTCGTTACTGTTCCTATGTGAACTCGCAAAAATGCAAAATTCCAAACCACGAAAAAATACACTGTATTGTTTTTGAAAATAGTGAAATTACCGTATACAAATGTCTGGAATGTAAGTTTACTTGTGATAACGCTATAAGACTTGCTGAACATTCAAGAACTCACGGTGAAATATATGGCCGCATTTACTGCCCTGTCGATGCTGACATTCCTGATGACGAACAAATAGCAAAGTTGCGTAGAGTTATAGAAGCTGAAAAAACTACTAATATTGAAGGACTTCAGAAAGATGATGGAATTGGATGTGATAGTAAAGAAACTAAAACACTATATTTCTGTCAAAAGTGTCCAGCCCGGTTTTTCGCTGGCGAAGAACTAAAAATTCATGATAAGTTTCATGATTTATCTTTTCCTCACAAATGCAAGAGTTGCGAATTTTCAGTACCAGAAGCAACTGATCTTGGCTCTCATGTTGTTGTTCATACTGACGAGTACCATACGAAAACAAAAATGCTTAAGTTTATTAACTGTTCTAATGCAGCACACCAACAGCCTGCATTGGAGCTTGTTCACTGTCCTACTACGTCAGAAATTACATGGATTGTATCAAATCCAGGTAAAAATTATGATGAATCTAGCCATAAGAAATTGAATGAGACAAAACACACGCCAAAACAATATCTTTGCAAAGAATGCCCTGCAAAATTCTTCAAAAGTTCAGCTCTAAGTTATCACATGGGATTACATGGAGGTGACGGAGATCACAAATGCAAAAAATGCAGCTACGCCGTAAAGAACGTAGGAAACTTAGCAAAACACGAGTTGTTACATGAAAATGAAGGAAAGACTTCCACTTGTGATTATGAATCAGGTGAGGACAtggattataaaaatattcccTTATCGGGCACCGATTTATTTCAACGGAAGACCGAGGCCCAAAAAAGGGTGTTAAATGATAAAGACAAATTAGTGAAACCAAATGACCATTTTCCACCAGTTTTACAAGCGGATCCTCAATTTGGATATCTAATGCATGGGAATCCAGAGTTTATATACCCGACGTATCTGAAAAACGGTCGCCAAAAGGAAAAGCGTTACAAGTGTCATAAATGTCCTTCGGCTTTCGAGAAAAGGGAGCAATACAAAATACACTTATCTCTACATGGCTCTAAGCAAAGGTACAAATGTGAGCTCTGTGATTATTCGGTTAAATATTATGCTAACTACGTTCAACATATGAGAAAACATCAAATGAATGATGAAGCTCAagctgaaagaaagaaaagttgTAACGGATTCATTGAGTCCGAAATGCCAGAACAAAAACATGATGAAGAAGGGGACAATATTAAGTTGGCAATCAAAACAATGCCTCGAGTGACAGCAAAGAGTGATTTTCAGCAGTTTTCAATTAGCGACCAACAAACACTTAGATTATTGCAGCGAAGGCGTTCTATTAATAATGGTGGAAAAGAGCACTCTTCAGCTCCTGATATTTTACCAGCAAAAGATCGTAAATTGCATATGTGTTTATTATGTCCATACACTAACCAACGCCAGGATGCACTGTCTAATCATTATAGAAGGCATGACGACACAGATGTCCTCAATGGAGGTAATCACAAATGTTCTCACTGTGACCTTGTTGTTGTGCAGTCTCATTTCCTCCGTGAACATTTGAAAACTCATTTTAACTATCAAAAGAACCTTACGCCAGAATGCTTTGTAGCTAATGAGGATGTGAGCTTCACCATTACAAGAATCGATGAAGACAAGTCTACTGATCTCAAATTAGACATGCAGAGCAATAATTTCAAGTGCAATgaagaaaatatatttgttaaaatacaaaCGGGAGAACTCATGGTGGAATAA
Protein Sequence: MLQQMSSPSNVQVGEVATLVRPYEGRLCGEPSSEEASAEESDLPQCKIRRNYNCAKCTFYTQNPRAFLAHARDVHFEKFKIYDCPSCVYASRHHQKLIRHIKMVHGSASNPAKMEVELPAAAPDTAEPVERIEDMVEEVEECDDIEIDVDDCIEEVSDRSPDTENEDKSMADDSGLPLLKSDEKYFSCTKCSYATHIKARFTKHVKYHSMPLNKCTICDFRSPYKWNLDRHMKNHGGSGSFKCFMCNFTADIKQSLTSHELNHHTPPAGQSVVSRRRNRVGASDIMNALILKEDEGSGDSRSSYSASDMGLQGVEKDMISCNSDSNDAASDTTSKKDVMLAAQSEHSPNSATDDAKSQKHNRKIPRPLPQLIPLHASTPTQNKTPPGEPPSKKFKESPSSDLPDINKGNKFENLPVDITLIPVNNIPKENVGRKKNESFFDKLKERLLTETGEEGSLKCKNCGFESKCLSEHSVHEKNCTSQLNRTATNTLLPSLSSTRCQNCRHRCKSSADLFIHMKTCRKNEKNEEDASNEIKSQDSNDELIPIQEREIEPHPMENVVFVWNNIPHNANKFNTPLDININDDSTLPEANRSYDSELAEDNEGMNLSPSQAIGKKVFKCPHCPFWASTASRFHVHIVGHLNKKPFKCSLCKYKSNWRWDITKHIKLKSARDPEHHEAKVLMTDETGRRNYSKYNKFLAMSVNDGGNTVFHYLDSAPIATRESIDSFNDTSDFNQSFDMPLNLQMHNNELKLDSFDSGIQDQKKPKKTLWKCRKCNYRDPSKEALLEHVREHANEVSFDDHKAKKPDNMPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPGLTLSEINTDTCNKCPFKTSDKKQLLAHLQQHQPSPLSIFKCFFCPFFVKDEHELVQHLVLHGVTEPEEYIAKAMGRKSPLPEPGANTTPGTSTKRHKCSECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIITKKLESEFEAKAEARVEINLDEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIVFENSEITVYKCLECKFTCDNAIRLAEHSRTHGEIYGRIYCPVDADIPDDEQIAKLRRVIEAEKTTNIEGLQKDDGIGCDSKETKTLYFCQKCPARFFAGEELKIHDKFHDLSFPHKCKSCEFSVPEATDLGSHVVVHTDEYHTKTKMLKFINCSNAAHQQPALELVHCPTTSEITWIVSNPGKNYDESSHKKLNETKHTPKQYLCKECPAKFFKSSALSYHMGLHGGDGDHKCKKCSYAVKNVGNLAKHELLHENEGKTSTCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLNDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKSCNGFIESEMPEQKHDEEGDNIKLAIKTMPRVTAKSDFQQFSISDQQTLRLLQRRRSINNGGKEHSSAPDILPAKDRKLHMCLLCPYTNQRQDALSNHYRRHDDTDVLNGGNHKCSHCDLVVVQSHFLREHLKTHFNYQKNLTPECFVANEDVSFTITRIDEDKSTDLKLDMQSNNFKCNEENIFVKIQTGELMVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00365400;
90% Identity: iTF_01072086;
80% Identity: -