Basic Information

Insect: Mecyna flavalis
Gene Symbol: -
Assembly: GCA_949319885.1
Location: OX439420.1:6118794-6149054[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.97 85 4.8 0.1 2 22 505 525 504 526 0.85

2 17 0.001 0.092 14.1 0.0 1 23 536 559 536 559 0.96

3 17 1.2 1e+02 4.5 1.4 2 15 679 692 678 699 0.82

4 17 0.047 4.1 8.9 3.8 2 23 765 786 764 786 0.95

5 17 1.1 98 4.6 2.1 1 23 797 821 797 821 0.90

6 17 0.00039 0.034 15.5 2.6 2 23 828 851 827 851 0.97

7 17 0.092 8.1 8.0 0.2 1 23 857 879 857 879 0.93

8 17 0.0029 0.25 12.8 3.3 1 23 885 907 885 907 0.98

9 17 0.89 78 4.9 0.1 2 19 918 935 917 938 0.89

10 17 0.079 7 8.2 0.1 1 23 1018 1040 1018 1040 0.97

11 17 2.7 2.4e+02 3.4 7.2 1 23 1047 1069 1047 1069 0.95

12 17 0.0018 0.16 13.4 1.8 1 23 1110 1133 1110 1133 0.95

13 17 0.00034 0.03 15.7 3.3 1 23 1140 1163 1140 1163 0.97

14 17 0.018 1.6 10.3 0.2 2 23 1183 1205 1182 1205 0.96

15 17 0.054 4.8 8.7 1.9 1 23 1274 1296 1274 1296 0.97

16 17 0.00014 0.012 16.9 0.2 1 23 1302 1324 1302 1324 0.98

17 17 0.00097 0.085 14.2 0.6 3 23 1332 1353 1330 1353 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.97	85	4.8	0.1	2	22	505	525	504	526	0.85
2	17	0.001	0.092	14.1	0.0	1	23	536	559	536	559	0.96
3	17	1.2	1e+02	4.5	1.4	2	15	679	692	678	699	0.82
4	17	0.047	4.1	8.9	3.8	2	23	765	786	764	786	0.95
5	17	1.1	98	4.6	2.1	1	23	797	821	797	821	0.90
6	17	0.00039	0.034	15.5	2.6	2	23	828	851	827	851	0.97
7	17	0.092	8.1	8.0	0.2	1	23	857	879	857	879	0.93
8	17	0.0029	0.25	12.8	3.3	1	23	885	907	885	907	0.98
9	17	0.89	78	4.9	0.1	2	19	918	935	917	938	0.89
10	17	0.079	7	8.2	0.1	1	23	1018	1040	1018	1040	0.97
11	17	2.7	2.4e+02	3.4	7.2	1	23	1047	1069	1047	1069	0.95
12	17	0.0018	0.16	13.4	1.8	1	23	1110	1133	1110	1133	0.95
13	17	0.00034	0.03	15.7	3.3	1	23	1140	1163	1140	1163	0.97
14	17	0.018	1.6	10.3	0.2	2	23	1183	1205	1182	1205	0.96
15	17	0.054	4.8	8.7	1.9	1	23	1274	1296	1274	1296	0.97
16	17	0.00014	0.012	16.9	0.2	1	23	1302	1324	1302	1324	0.98
17	17	0.00097	0.085	14.2	0.6	3	23	1332	1353	1330	1353	0.94

Sequence Information

Coding Sequence: ATGGGTGAGCAGCCGCCATTGATACTCTTCATGGACAACATCAGGGGAGAGGAAGTGGCTCTAAAGATTGAGCCTGACGAAGATTTCCAGACTTTCCTCACCAATGCCAAGTCAACACTAGGCTATGACGTAGACATAAACTCAATAACTAGAAACCAGAGTGTATCTCTAAACGACAATATATACCAATTCTTAATAACGGCTGATAGAAACCTAGCATCCCAACTGGCACCAATACAAGAGCCAATGAAAACGTTGGATCAAATATTGGAGCCAAACAATGAAGCCAATGATCTAGTTTATATCTTAGACGATGGAACACAGATAAGAGCATCTCAGATACACTTCGATAATGATGACCCTCAAGTAGATCTCACTGCTGAGAAAATACCTTTCGTCAAATACATTGATGACGGTACAGACGATTTTGATCTTGAAAACGTAGGCGAAGAAGAGACCAAAAAGTTCAATATTGCTAAAAGCCCAGTCCCCCAATGGTCAAGTAAAGAGTCCAGTCCAAAATGCAGTTTTGTCAACACTCTTCCTTTCAAATTAGTCTGCAATAATACTTCAGTGTTTGAAGCTCAGTTTACCAAATACTTAGAATCGAGTACAGCGAAAACTTACACGACTTTGAACCCTGTAACTAACAGGAATAAGAGTCCTAGAAGTTTGATTAGAGATAACTATAAGAATTACGATGATAAATTCAGTAGGGGTGACGATTTTACTGGTTATACTCGAGAAGAAATTCTTAATATGTTCAAAGATTCACCTGTAACATCATTGCCTTATGAAGGCCAGAATATGAATGAGAAACGAAGGCACGTACGGAAAACTGATCCTTCAAGAGGTGTACATAAGAACTGGAGTTCCAAACCTGTAAATTACGATGATGGTATACTCATTGGTGATACTGAGAACCAGAACTGTTTTATATGCGGTAAATTCGTCGAAAATAATATTGAGAAGCTCTATCTATTCGATAATGAAGATCAGAAGCTTCACAGATCATCTCCTCAAAAGAAATCTTCGAGACAATTGAAAATTATATGCGAAAGCTGTTTAGGGGAAAATTTTAAACCTTGTAGAATGAAAGGGCCTAACCAATGTCTGAGTCCAGACGAGTATTTAGTAATAAGAAACAACCAGCAGTACATATTtcagaaaactaaaaaaattgttttcaaaaCAAATTACAAAGATGTAAGCGATAAAATAGATAAAGAAAATACGAAAAGAAGTCAAGAGAAAGAAAAAGTTGAGTTCGTAAAAGTCGAAATAGGTTCAGATGGGGAGATAGTTACAAAGCCCATAGACAATGATCCTAGGTCTTCTGATGACGTGATCATAGTGAAGGATGAGGATAAAGATGGCAGTTCTAGTGATGTAGAGATTATAGAGCCTCCAGAGATAGACGAGAATATCATAGACAATTTGGAAGATGCAGATGAAGAAGTTAAAGAGTTTTTGGGGAAATATCAGACGAATGTTAGCGCAGAGACGGAACTTAAGTGCAGGTTTTGTGAGAAAGCTTTCGCTGATCTACCAGAGGTGATGGATCACAGTGATGAGCACAGACATAACACGGAAGATGGAGCTGTTTACCCTTGTCCGTTGTGCGATTATGggTACGCAAATTCAAAATGGCTGAAAGGTCACATAAAAGCAGCTCACGAAAGGCCGAAAGAATCGAAACCAGAAgaggaaaataatattgaagctGAGAAAACCTCTACGACAACATCTCCTATTGCAAAAAGGACCAGAAGTTCTGTCAAAAAGTCTGAAGATGGTGACAAAGAAAGTCCTGCAAAGACCACTCAAGAAAACCCGCTGATTATAACGAATTCGGAATCGGCAGACGCAACCCTCACGATCAAGACGGAGTTGAAGCAAGAGTGCGTGGAGAGCAGCGACGACGAGATATGGATCGTGCAGACTGGCGACGAGGCCGCGGAGCAGCTGCGGAGCCTGCTCCATGCTGCCAAGCAGGGATGTCAAGGTGAGAAGACTGAAGAAGGGAAGACGAACAAATGTCCTAATTGCGGTCAAGTATACACATCAGAAGAGGACTCATCCTCTCACAAGTGCAAGTCGCGAAGAGGTAAAAAGAGGAAGTCTGTTAGTAAAGAGGAGAACGTTATCTGCGTGCCGACTCAAGAGGACTTTATCAAGAGAGCTCAAGGCAGACCCAGAGCTTCTTACGCGGAAAATTCTGACAACGATCTATTGGTCGTGAGACCAAGACGTAGGAAAAATAAGGAGCCGTCTTCAGACCCCCAGATCGTTACTTGTCACAACTGCAACGAGTCGTTCACTTCTAAAGTGCGACTGAAGTTCCATATGCAGTTCCACTCCCCATCCCGCCAGAACTCCTCAGACCGGTACAAGTGCACCGAATGCACTGGTCTTCGCTTCAGCACGGAGACAGAACTGTTCGACCACGTTCACTTCCAACACGACAAGCATAAGAGATGGCAGTGTCCTGTTGCGCACTGCGGGAAGACCTTCCACCTACGAGCGACGTTGACGAAGCACAGTCGAACTCACACGGACACGAGAAGATACGTGTGTGTGACGTGTGGCAAACGGTTTTTGGACAAGCAAACGTTGGACGAACATGGTGTTACGCATTTACAgATAAAGCCATTCCAATGCCACATCTGCCTGAAGCAGCTGACGCGCCGCTCCCGTCTTCGGATGCACCTTCGAGCTCATGAAGAAGAACTTACCCTCAAGCTGGTCTTAGTCTGCGCCGTCTGCAGCAGAGCCTTCAGGGACCACGCTGACGCACAGGAGCACGCTACAAAATCAACCGAATGCTTAGAAGAGTTTGCGAAGGAGCTGAAAGAGGAGGCAGAGGAGACGACCGCCCAGCTCTCGCCCACTAGTGGGCTTGTGAGGGAACCAGTGCAGTCTGAGCGTGAACCTCGTAAGCTCAGTGCGTACATCCCGCGCCAAGTGGCGGGTGCGCTGGCCGAGCCGCTGCTGAGCGGACTGGCCGACGAGGCACGAAGCGTCATCCGCGTCGTCGAGATCGAGAAGGCTTTCCGATGCGAGTATTGTGAAGACGTGTTCTATCTTGAAGATGGGCTGAATGCACATAGAGCGATACATAAGGGAGTCAAGAATCCTTTCACCTGCCACATATGTAAAGTCAGCTTTGCGACATATTCTAGATGTACAACCCACAAGACAACCCACGGATTCTACAAACGGTCATTGGCGGACGTTAAGAAGAACTCGGGCAAACCGAGCGAGGGAGCGGCGGGGCCCTCCGCTACCGGGATACTGGGCTACGGCGGCTTCCCCGTCGTCAAGCACTTCCTCTGCGAGGACTGCGGTCGCTCGTACCTCCACTGGACGTACTTGCAAGTGCACCGGAGGATGAAGCACGCTAACGACAACTTGCTGCACAAGTGCAACCACTGCGACATCACCTTCCCGAACAGTTGGAGTCTAGCCTACCACAGGAAGAAGATCCATGGCCAGGCAGGGCAAGGCGATGCCAACGCCAAGGCTACTGGAGACGGACATAGAATACCATGTCGAGATTGTGAGGAGGTGTTGCCAAACAAAACTGCGCTCTATAAACACAGGAAGAAAGAACACAGCGACACTACTCGCATAAACAGTAAGCCAAACGCCCTCTGGTGTATTCCGTGCGGGTCGCAGTTCGCGACGCGCGCAGAGCGAGACGCACATGCGCGCGCGCATGGCGCCGTCCCTCTCGCACAGTCGTGCAAGTGCGGGGACGGTTTTGAGCAAACCGGTGATCTGCATAAGCATGTTGACGTCCAATGCCGGCGTCGCGCGCACACGTGTCCGGTGTGCTCGCACGGGTTCCGCAGCGCGTCCGTGCGCGACGAGCACCTGCGCACGCACACCGGCGAGCGGCCCTACCCCTGCGACCTGTGCGGCCTCGCCTTCCGCAGGTCGACGGCGATGCGCAACCACCGGCTGATTCACACGGGCGTTCGCGCGTGGGCGTGCGAGCGCTGCCCCAAGCGCTTCCGCATCCGCTCCGACCTGCGCACGCACGCAAGACTCAAGCATCCCGCGCATCTTGCTGTTGTTGAGATCCGAGGGTTGAACCCCAGTCCCGATGAGGTGATGGAGCATCTTGCCGCCAACAACATTTCTCATGACAAAGTCATTGAGATCACCAAGATGTCTTTTGCAAAGGGCACGGTAAGTATAATACCGACGTGCGCAAGAGCGCTGTCCATGCTGGGAGATGTACCGAGGACGCAAGTCGCATATAGCAAGCCGGTCACCGACGACAAAGAATTCCAGCCCCCGCGCAGAGGTCGTGGTATTGCGAAAAATCCTAGAAGACCGAAGAGCCTGCCCACGGAGGGAGAGGAAGAACCGGCCCAGGACTCGAATCCGTACCCTATCACGATCAACGTCACTGGCGGGGAGCTGACAGACGTGGACGTCCAACTTCTTCTAAGGGATGGAGTGCTGGTGAACGGCAACCAGATGGTGCAGCTTCAGCTCACTGACTCCATGCTTATGGAATGA
Protein Sequence: MGEQPPLILFMDNIRGEEVALKIEPDEDFQTFLTNAKSTLGYDVDINSITRNQSVSLNDNIYQFLITADRNLASQLAPIQEPMKTLDQILEPNNEANDLVYILDDGTQIRASQIHFDNDDPQVDLTAEKIPFVKYIDDGTDDFDLENVGEEETKKFNIAKSPVPQWSSKESSPKCSFVNTLPFKLVCNNTSVFEAQFTKYLESSTAKTYTTLNPVTNRNKSPRSLIRDNYKNYDDKFSRGDDFTGYTREEILNMFKDSPVTSLPYEGQNMNEKRRHVRKTDPSRGVHKNWSSKPVNYDDGILIGDTENQNCFICGKFVENNIEKLYLFDNEDQKLHRSSPQKKSSRQLKIICESCLGENFKPCRMKGPNQCLSPDEYLVIRNNQQYIFQKTKKIVFKTNYKDVSDKIDKENTKRSQEKEKVEFVKVEIGSDGEIVTKPIDNDPRSSDDVIIVKDEDKDGSSSDVEIIEPPEIDENIIDNLEDADEEVKEFLGKYQTNVSAETELKCRFCEKAFADLPEVMDHSDEHRHNTEDGAVYPCPLCDYGYANSKWLKGHIKAAHERPKESKPEEENNIEAEKTSTTTSPIAKRTRSSVKKSEDGDKESPAKTTQENPLIITNSESADATLTIKTELKQECVESSDDEIWIVQTGDEAAEQLRSLLHAAKQGCQGEKTEEGKTNKCPNCGQVYTSEEDSSSHKCKSRRGKKRKSVSKEENVICVPTQEDFIKRAQGRPRASYAENSDNDLLVVRPRRRKNKEPSSDPQIVTCHNCNESFTSKVRLKFHMQFHSPSRQNSSDRYKCTECTGLRFSTETELFDHVHFQHDKHKRWQCPVAHCGKTFHLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHLRAHEEELTLKLVLVCAVCSRAFRDHADAQEHATKSTECLEEFAKELKEEAEETTAQLSPTSGLVREPVQSEREPRKLSAYIPRQVAGALAEPLLSGLADEARSVIRVVEIEKAFRCEYCEDVFYLEDGLNAHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADVKKNSGKPSEGAAGPSATGILGYGGFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANDNLLHKCNHCDITFPNSWSLAYHRKKIHGQAGQGDANAKATGDGHRIPCRDCEEVLPNKTALYKHRKKEHSDTTRINSKPNALWCIPCGSQFATRAERDAHARAHGAVPLAQSCKCGDGFEQTGDLHKHVDVQCRRRAHTCPVCSHGFRSASVRDEHLRTHTGERPYPCDLCGLAFRRSTAMRNHRLIHTGVRAWACERCPKRFRIRSDLRTHARLKHPAHLAVVEIRGLNPSPDEVMEHLAANNISHDKVIEITKMSFAKGTVSIIPTCARALSMLGDVPRTQVAYSKPVTDDKEFQPPRRGRGIAKNPRRPKSLPTEGEEEPAQDSNPYPITINVTGGELTDVDVQLLLRDGVLVNGNQMVQLQLTDSMLME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -