Mfla012100.1
Basic Information
- Insect
- Mecyna flavalis
- Gene Symbol
- Znf526
- Assembly
- GCA_949319885.1
- Location
- OX439421.1:7395590-7409485[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.042 3.7 9.1 5.7 1 23 287 309 287 309 0.98 2 18 0.025 2.2 9.8 0.4 1 23 316 338 316 338 0.98 3 18 0.12 11 7.6 0.3 1 23 342 365 342 365 0.97 4 18 0.13 11 7.6 2.7 1 23 372 395 372 395 0.96 5 18 2.7e-06 0.00024 22.3 0.2 2 23 401 422 401 422 0.98 6 18 7.6e-06 0.00067 20.9 3.4 1 23 428 450 428 450 0.98 7 18 0.0011 0.093 14.1 1.6 1 21 456 476 456 481 0.93 8 18 0.0032 0.28 12.6 0.3 3 23 491 512 489 512 0.95 9 18 0.13 11 7.6 0.4 1 23 518 541 518 541 0.94 10 18 0.26 23 6.6 0.2 1 11 552 562 552 569 0.88 11 18 0.26 23 6.6 0.2 1 11 592 602 592 609 0.88 12 18 0.26 23 6.6 0.2 1 11 632 642 632 649 0.88 13 18 0.26 23 6.6 0.2 1 11 672 682 672 689 0.88 14 18 0.26 23 6.6 0.2 1 11 712 722 712 729 0.88 15 18 0.26 23 6.6 0.2 1 11 752 762 752 769 0.88 16 18 0.11 9.6 7.8 0.1 1 13 792 804 792 807 0.85 17 18 6.4e-06 0.00057 21.1 1.0 1 23 885 907 885 907 0.98 18 18 0.0018 0.16 13.4 1.7 1 23 913 936 913 936 0.94
Sequence Information
- Coding Sequence
- ATGGATTTAAACTTAATACATACTGAGGAAGACCTTAAAATTGATTTTGAAGTTCCTAAACCTATTTGTCGCTGTTGTTTGTCTACTGAAAAAGAAATGAGAGATGTCGTGCCTTACGATCCTTATTTTAGGGAATTAGCCGGGATTTCAGTGATGGAGTCAGATGGCCTACCACAATGGCTGTGCTGGGAGTGTGTTGCACTGCTTCAGAAGTCAGTCCGTTTTAAACACAAGATGTTGCGGGCCCACAATTTACTGTACGAATACCTGACACGTTGCGCTCCTTTTCCAATAGATGCTGAAGACCCAGAATTGAGGAAGTACGCCTCACCGCACCTCAGCGTCACGAATACGCTCACTTACTCCACGGGAGGCCGGGGGAAGATGGGCTTCCAAGACGATTTGAAGCATGAGTCTCCCTCCACAACGGCCCAATTCCTCCCAGCCTCGCTGCCATCATACTCCCAGCCGCTGTCGTTCTCGGAGAAGCACCCAGACGACCTGGTCAAGATTGAGGACGATGTGGACTTTGGCTATGACGATGACCTCACTTTGGACGAGTATAGGGTAACAAATAAGCTGACAGACGAAGACTTGCAGCAACTTCTAGAAGACACGAGCGCGATAGAGCCTAAAGACGAGCCTGAgcccaagaagaagaagagaactaagaagaaagaagataaagtaaagaagaaaaagaaaggGGAAGACCGGTTGGTCTTCCCCTTGGAACGAAAGACATCGATTAGGAAGAGAGAAGATCTGGACCCCACCAAGATAAGGATAGTGACCCTGGACCCTGAGGAGCAGCTTCGACAAAGAATGGAAGAGAATAAATCGAACACGAGGTTCCCTTTCCACTGCCATCTCTGCTTCCAAGGGTTCAACTTTGAAGTGAAACTGGAAAACCATATGAAGAAACACAGTCCATCCCGAGGCCCGTTCGAATGCAAATTCTGCCGAATGTACCTCCCAACTGCATACAGCTTTGAAGTGCACATGCTCATTCACACGCAGCGGTACGAATGCGTCGAGTGCAATCGCCGCATGACCGACCGCGCCTCCATACTGGACCATTACAGATCACAACACGAAGGAATACAGAATGTGTTTACTTGCAACATTTGCGGGAAACTGTCTAACAACAAAAAGACGCACAGAGGCCACATGCGTAACGTCCACGGCGGGGAGAGGCCCAAGTGCGACCAGTGCGGGAAGTCTTTCGTCAACAAGGACTCGCTTATTGAACATCTTTTAATCCACCAAGGTATCAAGAACTACGAGTGTACGGAATGCGGGAAGAGATTCCGAACTCGAGCGCAGATCAAACACCACCAGTTGAAGCACAGTGACATCAAAGAGTTCTACTGCGTCGAGTGCGACGTTAGatTCAAGTCAGCACACAGCCTTCGGCAACACTTGCTGAAGTCTTTGAAACATAAAGATAAAACTAGTTTCAAGTTTGGTTGCAATCGCTGCGACAAGCGCTTCGAGACTGACCGTGCTCTGCGCGCGCACGTGCTGATCCAGCACGAGGGCGTGCGCGCGCACCGCTGCGGCCAGTGCCCCGCCGCGCTGGCCTCGCGCGGCTCGCTGCTCAAGCACGTGCACAACGTGCACCGCGGCCTGAGGCCGAGGCCGCCGCCCCGCCACGTCTGCGACACCTGCGGGAAGGCATTCCGGTGCCCCGCCGCGCTGGCCTCGCGCGGCTCGCTGCTCAAGCACGTGCACAACGTGCACCGCGGCCTGAGGCCGAGGCCGCCGCCCCGCCACGTCTGCGACACCTGCGGGAAGGCATTCCGGTGCCCCGCCGCGCTGGCCTCGCGCGGCTCGCTGCTCAAGCACGTGCACAACGTGCACCGCGGCCTGAGGCCGAGGCCGCCGCCCCGCCACGTCTGCGACACCTGCGGGAAGGCATTCCGGTGCCCCGCCGCGCTGGCCTCGCGCGGCTCGCTGCTCAAGCACGTGCACAACGTGCACCGCGGCCTGAGGCCGAGGCCGCCGCCCCGCCACGTCTGCGACACCTGCGGGAAGGCATTCCGGTGCCCCGCCGCGCTGGCCTCGCGCGGCTCGCTGCTCAAGCACGTGCACAACGTGCACCGCGGCCTGAGGCCGAGGCCGCCGCCCCGCCACGTCTGCGACACCTGCGGGAAGGCATTCCGGTGCCCCGCCGCGCTGGCCTCGCGCGGCTCGCTGCTCAAGCACGTGCACAACGTGCACCGCGGCCTGAGGCCGAGGCCGCCGCCCCGCCACGTCTGCGACACCTGCGGGAAGGCATTCCGGTGCCCCGCCGCGCTGGCCTCGCGCGGCTCGCTGCTCAAGCACGTGCACAACGTGCACCGCGGCCTGAGGCCGAGGCCGCCGCCCCGCCACGTCTGCGACACCTGCGGGAAGGCATTCCGGGTGAGTGCAGCCTACTACCCAGTGCCCCGCCGCGCTGGCCTCGCGCGGCTCGCTGCTCAAGCACGTGCACAACGTGCACCGCGGCCTGAGGCCGAGGCCGCCGCCCCGCCACGTCTGCGACACCTGCGGGAAGGCATTCCGGTGCAGCCTACTACCCAGTGCCCCGCCGCGCTGGCCTCGCGCGGCTCGCTGCTCAAGCACGTGCACAACGTGCACCGCGGCCTGAGGCCGAGGCCGCCGCCCCGCCACGTCTGCGACACCTGCGGGAAGGCCTTCCGGGGTAAGAGCGTGCTGACGAACCACGTGCGCACGCACACGGGCGAGAAGCCGTTCGCGTGCGCGCACTGCGGCCGCGGCTTCTCGCAGCGCACCGCCATGCACACGCACGTCAAGCTCGTGCACCTCAAGATGAGGAGGAGGACCAAGGTGGAGTCAGAAAAACCGCCGGCCCCCGAACCTTTCGAACCAAAAATCCAGTTTCCGAAGCAGGAGCCCTGGGCGAACCAGCCGCCCTGCGACGTCTACTTCCAAATATCCGTGTAG
- Protein Sequence
- MDLNLIHTEEDLKIDFEVPKPICRCCLSTEKEMRDVVPYDPYFRELAGISVMESDGLPQWLCWECVALLQKSVRFKHKMLRAHNLLYEYLTRCAPFPIDAEDPELRKYASPHLSVTNTLTYSTGGRGKMGFQDDLKHESPSTTAQFLPASLPSYSQPLSFSEKHPDDLVKIEDDVDFGYDDDLTLDEYRVTNKLTDEDLQQLLEDTSAIEPKDEPEPKKKKRTKKKEDKVKKKKKGEDRLVFPLERKTSIRKREDLDPTKIRIVTLDPEEQLRQRMEENKSNTRFPFHCHLCFQGFNFEVKLENHMKKHSPSRGPFECKFCRMYLPTAYSFEVHMLIHTQRYECVECNRRMTDRASILDHYRSQHEGIQNVFTCNICGKLSNNKKTHRGHMRNVHGGERPKCDQCGKSFVNKDSLIEHLLIHQGIKNYECTECGKRFRTRAQIKHHQLKHSDIKEFYCVECDVRFKSAHSLRQHLLKSLKHKDKTSFKFGCNRCDKRFETDRALRAHVLIQHEGVRAHRCGQCPAALASRGSLLKHVHNVHRGLRPRPPPRHVCDTCGKAFRCPAALASRGSLLKHVHNVHRGLRPRPPPRHVCDTCGKAFRCPAALASRGSLLKHVHNVHRGLRPRPPPRHVCDTCGKAFRCPAALASRGSLLKHVHNVHRGLRPRPPPRHVCDTCGKAFRCPAALASRGSLLKHVHNVHRGLRPRPPPRHVCDTCGKAFRCPAALASRGSLLKHVHNVHRGLRPRPPPRHVCDTCGKAFRCPAALASRGSLLKHVHNVHRGLRPRPPPRHVCDTCGKAFRVSAAYYPVPRRAGLARLAAQARAQRAPRPEAEAAAPPRLRHLREGIPVQPTTQCPAALASRGSLLKHVHNVHRGLRPRPPPRHVCDTCGKAFRGKSVLTNHVRTHTGEKPFACAHCGRGFSQRTAMHTHVKLVHLKMRRRTKVESEKPPAPEPFEPKIQFPKQEPWANQPPCDVYFQISV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -