Mfla012184.1
Basic Information
- Insect
- Mecyna flavalis
- Gene Symbol
- ZFX
- Assembly
- GCA_949319885.1
- Location
- OX439422.1:425807-432637[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0021 0.18 13.2 0.5 2 22 122 142 121 142 0.90 2 19 0.36 32 6.2 0.4 3 23 148 168 147 168 0.96 3 19 0.069 6.1 8.4 1.1 1 23 173 196 173 196 0.89 4 19 0.026 2.3 9.8 1.0 1 21 201 221 201 223 0.88 5 19 0.6 53 5.5 11.3 1 21 226 246 226 247 0.95 6 19 0.00031 0.027 15.8 1.1 1 23 261 284 261 284 0.95 7 19 9e-05 0.0079 17.5 1.0 1 23 290 312 290 312 0.98 8 19 3.5 3.1e+02 3.0 0.4 5 23 322 340 320 340 0.92 9 19 1.9 1.7e+02 3.9 0.4 1 23 346 369 346 369 0.87 10 19 8.4e-05 0.0074 17.6 2.5 2 20 497 515 496 517 0.92 11 19 1.8 1.6e+02 4.0 0.0 3 23 524 545 523 545 0.95 12 19 0.18 16 7.1 1.1 3 23 552 573 550 573 0.95 13 19 3.1e-05 0.0027 18.9 0.4 2 23 579 600 578 600 0.96 14 19 0.5 44 5.7 2.4 2 21 604 623 604 624 0.91 15 19 0.00019 0.017 16.5 0.3 1 23 650 673 650 673 0.95 16 19 0.00036 0.032 15.6 0.5 1 23 679 701 679 701 0.95 17 19 0.043 3.8 9.1 0.2 1 23 707 729 707 729 0.98 18 19 0.13 11 7.5 0.8 1 23 735 758 735 758 0.83 19 19 0.00025 0.022 16.1 0.3 2 23 765 787 764 787 0.96
Sequence Information
- Coding Sequence
- ATGGTGGAGGAAGACTGCGCCCTGCCTCGAGGAGTCTGCCGCGACTGTTCTCAGGGCGCCCTGGCCGCAATAAACTTCAGACAGTCTTGCAAGGAATCGCTCGACCAGTGGAATCAGGCAACCGCCTTCCTCTCCAACATAATACCGCCGCACGACAACGACAAAGCTTACTACATATTCTATAACTTACAAGACAGGACTATCATTGGTGATCAGTCAGTCGGGGCTAATAATACAGATAAAGCTATAAAAAGATTAAACACTGGATTTCAGGATGATGTAGAAGACGTAAAGGACATAAAGGTAACTAAGGCAGAGAAGACAGCTAGAAGGATGATTCAGAAAAATCTGCACACATCTTGGAATTGTCCGGATTGCGGGAAGAAATTCTCATTGCCGCATTACCTGAACTTCCATTTGAAGACAACGTTGAAAAGGGCGTGTGAGGAGTGCGGGCTTGTTATAAGTAAGACGAAGTTGGCGCAGCATTTGTGCACGGAACATGGGAAACTGGTGTACGAGTGTGAACATTGTAAAGAAGTTTTCGAGGAGCCACAGAAGTTTGATTCGCACTTCCAAGGTATGCATAAGGATTCGGCTCATCATTGCAAGGTGTGTGGAATGGGTTTCAGCAGCGAAAGGGCCTTGGACGCTCACAATTACGGCCATTCTTTATTTCACTGTAATCACTGCGGGATTTGTTTTGAAAATAGGAAATGCTACTTTCATCACCAGAAGCAGTGTAAGCGCACTGTTAAAGTCACCAAAACCATGACCGAGTACATTTGTGACCATTGCGGGAATTCTTACACTAAAAAGCCGTCCCTTCGGATCCATATAATACAGAAGCACTTGAACGTTCTTCCATACGTGTGTGAAACGTGTGGGAAGCGTACGTCAACGATAGCACATTTGAGGTCCCATGAAAAAGTTCATTTGCTGGAAAGGAAGACTTTTCAGTGCTACTGTGGAGCGAAGATGAGAACATCGTTAGGTTACCAGCTCCATATGAGGATACATTCCGGAGAAAAACCCTACGAGTGTGACGAGTGTGGAGATAAGTTTCTATCTGCGTCTAGAAGGCTGGATCATATTAAGAGAAGGCACAGAAGCACAAAAGACATGGCCCATGGTTGTAAAGAGTGCCCGGCGAGATTCATCGAAGAGGACACGCACATACCGACAGGCGCGTGCGCTGCCTGCGTCTCCAGCGCTCTAGCTGCGCAACAATTCAGGGTTTTTACGCAAAACTCGCAAAAAGCTTGGAGGAAAGTCATCCACGCCCTATGGGAGATTCCCTTCTCCTCCGCCGCCGGAGTGAAATCACTCTGCGCTTTCATTAAGCCAGACAACTTAGCTATGCATGTCGTCAAAGATTTCACAGGCGGCGACACGAAAACTGTCATGAGTAGGCTGAAAAATAGACTTACGAAGAAGAAACCTAGTCTGGATAAAAAGCCGAGATCGACTCGCTCAGGGCCGTCCTGCGACTGTCCAGATTGCGGCAAGACTTTCTACAGCCCGTATTATCTGTGCCAGCATCTCAGCAACAGCGGGCAGAAGGAAGCTTGCGCTACTTGTGGTTTAGTTGTCATAAGAGGGAAAGAGATGAAGGAACACCTGTCTCGAGTGCACGGGGAGACGGTTATATGTTGCGATAAGTGTCCTTTACTGTTTACGAGTGAATTGAGATTGGAGAAGCACGTTAAGAAGGCTCATCGAGCAGGGTCGATGACTTGTTCGGATTGTGGGCGGAGTTTTCCTAGACGAGCGACGTTTGAAGCTCATTCTCAAATGCATGCTGTCAGGACTTGCAGGGCCTGTGGAAGGCAGTTCACGAATAGAGTGTGCTATAGAGAACACAGGTCGAAATGCGAGCCCGATGCTCGTCCTAACACTCAGTCTTTGCCTAGAAACAAACGATCGAACATACGCGATCCAGCGACATATACATGTGACTACTGCGGAAAGACTTACCTCTCCCGACCGCAGTTGAAGAACCATATAATATGGATTCATATGGACGTACGTCCGCATCAATGCCAGTGGTGTGGAAAACGGTTCTACACTCCAGCGCGTCTGGCAGAGCACACAGTAGTCCATACGAGAGTACGCAACTTCGAATGCGATATTTGCGGAGCGAAATTAGTCTCCCGAATGGCTATGGTGTACCACAAGAGGAGGCATACGGGAGAGAAACCGTACACTTGCGAGGATTGTGGAGAGAAGTTTCTATCTTCTTCTAGAAGGTCGGAGCACGCTAAAAGAAGACATGGCAAAGGTCCTTTAGTTCAATGCCAGCAGTGTCCAGCCATGTTTCCTAGGACATACGAATTGAAGAAGCATATCGAGAAGTCGCATAGAGTGAAGTCTGAATATGAAATGCCGGTGAATGATACTAAATATTCTCCACCAAAGACCAGGCGGGTTCCAGCGCTTGAAGAGCTGGAGGAGAAATACGAGACAAGTGGTGAAGACATGAAGTCGTTTGTCGAAGTGGAGTGGAAGCCTAGTGGGCTAGGGCAAGGAGACCCTGTTATTGTAAGACCTATGTAG
- Protein Sequence
- MVEEDCALPRGVCRDCSQGALAAINFRQSCKESLDQWNQATAFLSNIIPPHDNDKAYYIFYNLQDRTIIGDQSVGANNTDKAIKRLNTGFQDDVEDVKDIKVTKAEKTARRMIQKNLHTSWNCPDCGKKFSLPHYLNFHLKTTLKRACEECGLVISKTKLAQHLCTEHGKLVYECEHCKEVFEEPQKFDSHFQGMHKDSAHHCKVCGMGFSSERALDAHNYGHSLFHCNHCGICFENRKCYFHHQKQCKRTVKVTKTMTEYICDHCGNSYTKKPSLRIHIIQKHLNVLPYVCETCGKRTSTIAHLRSHEKVHLLERKTFQCYCGAKMRTSLGYQLHMRIHSGEKPYECDECGDKFLSASRRLDHIKRRHRSTKDMAHGCKECPARFIEEDTHIPTGACAACVSSALAAQQFRVFTQNSQKAWRKVIHALWEIPFSSAAGVKSLCAFIKPDNLAMHVVKDFTGGDTKTVMSRLKNRLTKKKPSLDKKPRSTRSGPSCDCPDCGKTFYSPYYLCQHLSNSGQKEACATCGLVVIRGKEMKEHLSRVHGETVICCDKCPLLFTSELRLEKHVKKAHRAGSMTCSDCGRSFPRRATFEAHSQMHAVRTCRACGRQFTNRVCYREHRSKCEPDARPNTQSLPRNKRSNIRDPATYTCDYCGKTYLSRPQLKNHIIWIHMDVRPHQCQWCGKRFYTPARLAEHTVVHTRVRNFECDICGAKLVSRMAMVYHKRRHTGEKPYTCEDCGEKFLSSSRRSEHAKRRHGKGPLVQCQQCPAMFPRTYELKKHIEKSHRVKSEYEMPVNDTKYSPPKTRRVPALEELEEKYETSGEDMKSFVEVEWKPSGLGQGDPVIVRPM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -