Mfla012627.1
Basic Information
- Insect
- Mecyna flavalis
- Gene Symbol
- -
- Assembly
- GCA_949319885.1
- Location
- OX439422.1:4941900-4948810[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 35 0.00028 0.025 15.9 2.4 1 23 46 68 46 68 0.98 2 35 0.35 31 6.2 0.2 2 23 139 161 138 161 0.89 3 35 0.093 8.2 8.0 0.1 1 23 166 189 166 189 0.96 4 35 0.0061 0.54 11.7 1.3 2 23 215 237 214 237 0.96 5 35 3.1 2.7e+02 3.2 0.3 3 21 261 279 259 280 0.90 6 35 3.2 2.9e+02 3.2 0.3 1 23 306 329 306 329 0.93 7 35 0.00063 0.055 14.8 0.4 3 23 339 360 338 360 0.97 8 35 0.016 1.4 10.4 0.8 2 23 365 387 365 387 0.96 9 35 0.025 2.2 9.8 0.3 1 23 431 453 431 453 0.97 10 35 0.72 64 5.2 0.1 2 17 481 496 480 500 0.86 11 35 1.8 1.6e+02 3.9 2.1 2 23 525 547 524 547 0.94 12 35 1.8e-05 0.0016 19.7 3.8 1 23 552 574 552 575 0.96 13 35 0.00095 0.083 14.3 0.4 1 23 579 602 579 602 0.94 14 35 0.029 2.5 9.6 0.8 3 23 606 627 605 627 0.97 15 35 2.8 2.4e+02 3.4 0.1 2 19 636 653 635 655 0.93 16 35 0.79 69 5.1 2.1 1 23 704 727 704 727 0.92 17 35 0.28 25 6.5 0.0 2 22 756 776 755 778 0.88 18 35 0.00019 0.017 16.5 0.8 1 23 800 823 800 823 0.93 19 35 9.7e-05 0.0085 17.4 0.1 3 23 830 851 828 851 0.94 20 35 0.0037 0.33 12.4 0.6 1 23 856 879 856 879 0.90 21 35 0.00057 0.05 15.0 0.7 2 23 885 907 885 907 0.93 22 35 0.018 1.6 10.2 0.8 1 23 957 979 957 979 0.95 23 35 0.0077 0.68 11.4 0.0 2 23 1007 1029 1006 1029 0.96 24 35 0.06 5.3 8.6 0.5 2 23 1050 1072 1049 1072 0.95 25 35 0.0027 0.24 12.9 1.0 2 21 1078 1097 1077 1100 0.93 26 35 0.0083 0.73 11.3 3.8 1 23 1105 1128 1105 1128 0.97 27 35 0.042 3.7 9.1 0.6 2 23 1131 1153 1131 1153 0.95 28 35 0.0035 0.31 12.5 1.5 1 23 1235 1258 1235 1258 0.93 29 35 1.1 96 4.6 0.1 2 23 1331 1354 1330 1354 0.94 30 35 0.00043 0.038 15.4 0.1 3 23 1361 1382 1360 1382 0.94 31 35 0.099 8.7 7.9 6.4 2 23 1387 1409 1386 1409 0.94 32 35 0.01 0.92 11.0 4.6 1 23 1414 1437 1414 1437 0.96 33 35 7.9e-05 0.0069 17.7 6.1 1 23 1441 1464 1441 1464 0.97 34 35 0.0028 0.25 12.8 0.4 2 23 1471 1492 1470 1492 0.96 35 35 0.00089 0.078 14.4 3.8 1 23 1498 1520 1498 1520 0.97
Sequence Information
- Coding Sequence
- ATGATTTATAAGTTTCTTCCGAACTACTGTGGCAAAAACAAGACTCGTTCAGAATACACAGTGGCGCGTCGCCGCGTCAACTTGCAGATATTGTTGAATAACACTGGCATACTGCCGTTTAAGTGGAAGAACCTCTTCGTGTGCTTCTATTGCGGAAAACACACGACCGAGTCCTCTGAACTGAGGGACCACACTCTCACACACGGGGAGTGCACCCTCGGAGAATATTCGATCAAAAAACTCCGCACTTCACAGATAGAAATTAAATTAGACGTATCAAATCTTTCCTGCAAACTTTGCAAAGTAAACTTCCTCGAACTTGACGATATTATAGACCATTTGATCGACGAACATCAGTCGAAATACGACAAAAAAGTATGCATGTATATGCAGCAGTACAATCTCACGAAATCTTCATGCCCAGTATGCTCCCAAAGTTTTCTTTACTCGTCCTTTCTGATAAACCACGTGGATGAAAGCCATCCAATTGTTTCTTACTCATGTGAACAGTGTCTTGATCAGTTCAGCTCCCAAGAATACTTGGAAGAACACTTGGCTTCGGTTCATGATAAGCCTTCGTATGAACTTCAAACACTTTTTCGAATGTCGAATGCGTTACCGTTCAACTTTGTCAACAAACTTCAATGTTATTACTGCAAAAGGAGTTACGACGACTTCACCAGTCTAAAAGATCACGTGTCTACGTCCCACAGCGACTTAGATTTgtcaaattttataataaaagggaAGTATATCAATATTTCCATTAACGATCTCGCTTGTAAATGTTGTAAAGAAAATTTTGAGAATTTGGAAAGTTTAGTTGATCATCTGAACGTGTCCAAAATTGCTAATATAGATAGGGATTCGTTAAGATACTTGTTGCCTTTCAAATTTGAGGGGGAAAAAGGGCTGTTCATATGTCAGCTGTGCGAGAAATCTAATGGAAATTTCCTTATGTTGATGGAGCATATGAAAAGCGACCATGTGAATCAGTTGCCTCCAACAGCGTTGTGTGCTAAGTGCGGCATGGGTTTTCAAAGGCAGTCGTATTTGAATGAGCACGTAAGAAGATATCATAGGTTTTCTCGGGAATGCACGATATGcgggaaagaaatgcctaacaaGCATAGACTGGCTGTACACATGAAATACTCACACTTTATTAAAGACACCGTGAATGATGAATATGTACCTGGGACAGTGCACAATGCTAATAAAGTAAGGAGGAGAAATCTGGCAATACTTTTCAACAACACAACAGTAATACCCTTTAAGTGGCGTGGGAAATACATTTGTTTTTACTGCGGGGAAGATGTGGACACTTACCGCGAGCTAAGAGAGCATACGAAAGGTCACGGGGTTTGCTCAGAACAGGACAGAGCTATTAGACTTGTTCGCGTTAAAGATTCTGAAATCAAAATTGATGTTTCTGAAATGTCTTGCAATCTTTGCAGCGAATCGTTCACCCAATTTGAAGATTTAGTCTTCCATTTAATATGTAAGCACAAACTTCAGTACAACAAGGATGTAGACTTGACTGTTATATCTAAATACAGACTTGTAGACCTCAAATGTGTGTTATGCAACGACAGCTTTAACTACTTTAGTAAGCTAATTATGCATGTCAACCATAAGCATCCGGCTAACTGTTTCACCTGTGACAATTGCGATCAGAAGTTTAACAAAAAGAGGGATTTAGAATCACATATAAGAACTCATCATAGATCGACGTATATATGCACGAAATGTCCCTTAATATTTTCTACGTTTGCAGAGTTACAGAAACACAAGTCGAACGCTCATGTATCTGCTTGCAATATTTGCTTTGAAACATTCTCTTCGGACGGTAAAAGGCTGAAGCATATGAAAAAGGCTCACTTTCACAATAGCGATGAAAGCTTACAATGTGGTTTTTGCCTCAAGACCCTGACTACGAAGATAGCATTTTTCAACCACGCAGCGCAGTGTAACGTCAAAGACACTTCTAAATTGGGTAGCGAGTCTGTTGACGTCGAAAAGAAGCCTAAAGTCGTTCAAATAAGGAATAATATAGCATGTATTGTAAACATGTCGACTGCATTACCTTTCAAATACTTTATGAACAAATTCAGATGTTTCTATTGTCCGAAAGATTTTCTAGAGTGTGAAGAGTTAAAAGAACACACGGTGAGGGAGCATCCTGTCTGTGATAGTAAATTGAAGGCAATGAGACTTAGAAATAGAGAACATGGACATAAAATCAAACTTGATATAGCGACTTTATCTTGCAAAATATGTTTCAAATCCATAGATGATCTGGAATCTTTAATAGATCATTTAGTTGCGGAGCATAATGCACAATATGATAAAACTGTCGACCATAACATTCAACCTTTCAAGTTGATAAAAGATAACTTCGCGTGTCCGTTTTGCGGGGAAACATTCAGATATTTCAGCAGTCTTTTGAAGCATGTCAGTCAATCTCACACGGATAATAGAATCATTTGCGTTTACTGCGGCAAAACCTTTAGGACTGACCCGAGTCTCCGAGCTCATATTTCCGTTCGTCATAAACCAAATGGATACAAATGTACCGTTTGTAGTCTAGATTTCACGTCTAAGACTGCCCTAAGAGATCATTCGGGTAAAGCGCACGGGAGTAAAGTAGCCAAGTGTTTGGAATGTTCGGAGAAATTCACGTCCCAATATTCTATGCAGAGGCATATGATAGACATTCACGCAACAGGACATAAATGTTCTTACTGCGATGAAAAGAACGTGATCGCTCGGGCCCCTTACGAAGGCTGCGCCTCAGAGCGCCGGAGAAAGAACTTGGAAATCCTTTTCAACTACACCACTATTTTACCTTTCAAATGGCGAGGCCGTTATCTCTGTTTCTATTGCCCCAAAAACTTTATCGAGTACGCAGAGTTCAAATCTCACACGGAATCCCACGGCACTTGTAGCACAAAAGACAATTCCTTAAGATGTATCAAAGGTAGCCATATTGAAATAAAGATCGACGTTTCGGAAGTGACTTGCAAGATTTGCACGGAGCCGTTTAGCGACTGGAATGAAATAGTCGATCATTTGGCGACGAAACACAAAATGGAGTACGATAAAACTGTTAAAATGCCACTCCAAGCGTACAAGTTGTCTGATATGAGTTGCTTGTTCTGCAGGGAAAAGTTTAGTTACTTCGGAAACTTAGTAAGTCACGTGAACGTGACGCATCcgcaaaataaattgatttgcgACGACTGTGGAGTTTCGTTTAACAAAAAAAGGGACTTGGCTGTGCATTACAGGTGCCAACATCGCAGAGGCGGGTACGCTTGCGATCAATGCACTCATACTTTTGAAACCTTCAACTCCTTACGCTCTCATCGAAACACTACTCATTTTAGGAAATGTTCAAGCTGCAACTTACGCTTCGGATCTATGACGTTATTACAAAAACATATTCTGTTAGAACATCCGGATAATGGGAATCTATCTTGCGAGTATTGCTCTAAACTGTGTCACACAGTTCAGGGTTTAAGACAACATAAGAGCAAGTGTAGTGTGAAGATGATTTGTACAgcagatgatgatgacgatgccTCTGAAGCCGTGTTCAACGTCCAGACCTCGAAAAGACAGAATATAAAGCAAATAAGACAAAATATTCAATGCGTTTTAAATATGTCGACCGCAGTTCCCTTTAAATTCTTCTCAAAGTACTCTTGCTTTTATTGTTCCAAGAAGTTCTCTGAATTTGAGGAACTTAGGCAACATACGGCACTGGAGCACCCCGTGTGCGATCTAGAATCGAAATACATGAGAAAGTGCAAAGGTGAACGAATAAATGTTAAGATTGATATATCGTCACTAACTTGCAAACTGTGTCTTCAACCTATGGAAGAATTGCAATCACTTATCGATCATTTAATTACGGAGCATAAAGCGAACTTTGATAAGTCAGCAGCAAGATGTCTAGATCCATACAAGATAATTAAAGACAACATACCTTGCCCGTTATGTCCGGACAAGACTTTCAGATACTTCGGAATATTACTTCGCCACATAAACTCTGATCATAGCAACAACAACAAGATTTGTGATTTCTGCGGTCGTGCGTTCAGAAACGTTGTAAACTTGAACGTTCATATTTCGTACGCTCACGCGGGCACGTGCACTTGTGACGTTTGCGGGATGAAATGCAAGAACCAGTGGTGTCTTGCAAGGCACCGTGCTAAGACCCATGACGCTAAAGATCATAAATGCCCGAAATGCCCGGAGCAGTTCCAATCGCAGTACCACAAGCAAAAGCATTTGATTAAGATCCATGATGTAGGGCATAAATGCGTTCACTGCGGTAAAATGTTTACAAGGAATTCGTTTATGAAGGATCATATAAGGAGGACGCATTTGAAGGAGAAAAATGTACCGTGTACACTTTGCTCGGAGAAGTTCTTTGACAACTATTTGTTAAGGATGCATATGGTTAAGCATGAGGGTGAGCGGAAGTTCTGTTGTTCTGTGTGTGGGAAAGCGTTTCTTCGCAGAAGTAATCTGCATTCGCATTTGGAGATGCATAAGAAATACGGTTATCCGGTTGGAGCGATTCAAAATATGATGAGTTGA
- Protein Sequence
- MIYKFLPNYCGKNKTRSEYTVARRRVNLQILLNNTGILPFKWKNLFVCFYCGKHTTESSELRDHTLTHGECTLGEYSIKKLRTSQIEIKLDVSNLSCKLCKVNFLELDDIIDHLIDEHQSKYDKKVCMYMQQYNLTKSSCPVCSQSFLYSSFLINHVDESHPIVSYSCEQCLDQFSSQEYLEEHLASVHDKPSYELQTLFRMSNALPFNFVNKLQCYYCKRSYDDFTSLKDHVSTSHSDLDLSNFIIKGKYINISINDLACKCCKENFENLESLVDHLNVSKIANIDRDSLRYLLPFKFEGEKGLFICQLCEKSNGNFLMLMEHMKSDHVNQLPPTALCAKCGMGFQRQSYLNEHVRRYHRFSRECTICGKEMPNKHRLAVHMKYSHFIKDTVNDEYVPGTVHNANKVRRRNLAILFNNTTVIPFKWRGKYICFYCGEDVDTYRELREHTKGHGVCSEQDRAIRLVRVKDSEIKIDVSEMSCNLCSESFTQFEDLVFHLICKHKLQYNKDVDLTVISKYRLVDLKCVLCNDSFNYFSKLIMHVNHKHPANCFTCDNCDQKFNKKRDLESHIRTHHRSTYICTKCPLIFSTFAELQKHKSNAHVSACNICFETFSSDGKRLKHMKKAHFHNSDESLQCGFCLKTLTTKIAFFNHAAQCNVKDTSKLGSESVDVEKKPKVVQIRNNIACIVNMSTALPFKYFMNKFRCFYCPKDFLECEELKEHTVREHPVCDSKLKAMRLRNREHGHKIKLDIATLSCKICFKSIDDLESLIDHLVAEHNAQYDKTVDHNIQPFKLIKDNFACPFCGETFRYFSSLLKHVSQSHTDNRIICVYCGKTFRTDPSLRAHISVRHKPNGYKCTVCSLDFTSKTALRDHSGKAHGSKVAKCLECSEKFTSQYSMQRHMIDIHATGHKCSYCDEKNVIARAPYEGCASERRRKNLEILFNYTTILPFKWRGRYLCFYCPKNFIEYAEFKSHTESHGTCSTKDNSLRCIKGSHIEIKIDVSEVTCKICTEPFSDWNEIVDHLATKHKMEYDKTVKMPLQAYKLSDMSCLFCREKFSYFGNLVSHVNVTHPQNKLICDDCGVSFNKKRDLAVHYRCQHRRGGYACDQCTHTFETFNSLRSHRNTTHFRKCSSCNLRFGSMTLLQKHILLEHPDNGNLSCEYCSKLCHTVQGLRQHKSKCSVKMICTADDDDDASEAVFNVQTSKRQNIKQIRQNIQCVLNMSTAVPFKFFSKYSCFYCSKKFSEFEELRQHTALEHPVCDLESKYMRKCKGERINVKIDISSLTCKLCLQPMEELQSLIDHLITEHKANFDKSAARCLDPYKIIKDNIPCPLCPDKTFRYFGILLRHINSDHSNNNKICDFCGRAFRNVVNLNVHISYAHAGTCTCDVCGMKCKNQWCLARHRAKTHDAKDHKCPKCPEQFQSQYHKQKHLIKIHDVGHKCVHCGKMFTRNSFMKDHIRRTHLKEKNVPCTLCSEKFFDNYLLRMHMVKHEGERKFCCSVCGKAFLRRSNLHSHLEMHKKYGYPVGAIQNMMS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -