Mfla003729.1
Basic Information
- Insect
- Mecyna flavalis
- Gene Symbol
- ZFY
- Assembly
- GCA_949319885.1
- Location
- OX439410.1:16484220-16492035[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.017 1.5 10.4 1.2 1 23 309 331 309 331 0.97 2 20 0.27 24 6.5 1.1 6 23 343 360 343 361 0.95 3 20 0.013 1.1 10.7 0.3 3 23 373 394 372 394 0.96 4 20 1.1e-05 0.00099 20.3 2.1 2 23 417 438 417 438 0.97 5 20 1.2e-05 0.0011 20.2 0.9 1 23 445 468 445 468 0.97 6 20 0.0014 0.12 13.7 0.1 1 23 474 496 474 496 0.97 7 20 3e-06 0.00027 22.1 1.1 1 23 502 524 502 524 0.98 8 20 0.36 31 6.2 3.1 1 23 664 686 664 686 0.96 9 20 0.00058 0.051 14.9 2.0 2 23 693 715 692 715 0.92 10 20 0.0021 0.19 13.2 1.8 1 23 721 743 721 743 0.96 11 20 6.2e-06 0.00055 21.1 1.0 1 23 749 771 749 771 0.98 12 20 0.00022 0.019 16.3 0.1 1 23 777 799 777 799 0.96 13 20 0.012 1.1 10.8 3.4 5 23 808 826 805 826 0.95 14 20 0.00016 0.014 16.7 1.4 1 23 832 855 832 855 0.97 15 20 0.0032 0.28 12.6 0.7 2 23 922 942 922 942 0.97 16 20 3.6e-06 0.00032 21.9 0.2 1 23 948 971 948 971 0.96 17 20 8.8e-05 0.0077 17.5 5.5 1 23 977 999 977 999 0.98 18 20 0.0018 0.16 13.4 0.1 1 23 1005 1027 1005 1027 0.98 19 20 0.00015 0.013 16.8 0.3 1 23 1032 1054 1032 1054 0.97 20 20 0.0012 0.11 14.0 0.2 6 23 1064 1081 1063 1081 0.99
Sequence Information
- Coding Sequence
- ATGAGTAATGCAACTGAGCAGATATTTCTTCTGAGTCCACCAGTGGGCCAGCCTACCAGCGGGCTTGAGAAAGCGCCGGGACCCGCTGCATCACAACAAATCAACCTTCATGATGTGAAAGACTTTTCTTCAGTTTGCCGCACATGTGCCACGGTCACACAATATGTCATTCCCATATTTGAAGGAGATGGTCTTCTAAACAAACTAGCTGAGAAAATCCACAAGCACTTGCCAATTCAGGTGAGCGAGAAGGATGTGCTGCCTCGGGTGATGTGCTACCAGTGCGCGAGCACGCTTCTTGCGTGGCACGAGCTCGTGCAGTGCTGCGTGCAGGCCGACGCCGCGCTGCGCACGCGCCTGGCCGTCGCGCCCGCCATACACCCCAGCCCTACGTCCAGGCCGGGTACAAACAGCCAAGTCGTCGCCTCTCCACCGGTGGAGGTCGGGACTGCTGGCCCTGGAGCGTCCTTTTCCTCGAAGGTCATTGCCGCTACTACGTTTGCTGCAGCGGACGCAGCGTCAGCAGAAGAGCGCCTCGGACGCGGAACTCAAACGGAGCCTGAAATGTGTGCAGAGAATGCAGCCAACCAAGATGATAAAAGAGAACAGCATCCAGCATTCAAGTATGAAAACTATATTTGTGCCCAGTTAAAAGACATATTGACTGACTACTTTCCAACAATATCAGTGAAGGGCGACACGTTAGACATAGAGTTCGTTTGCCAAAAGTGCGAGGAGCGCCCCGCCGCATATAGCATAGAGCAGCTTGCTAGCCATATACTAACAATGCACTCGGATAAATCTTCGGAGATAAAAAAGTTCGTTGAAAACTACATCACCCTCAAAGAAACATTGTCATCCGGAGACTCTGATAGAGATATTGCACCAGAGCCAACAGCAAAAAACCCTGAATCATTGCCAAACTTCTTCTGCCCGTTCTGCGAGAGCATATTCTCCTCCTCGACACGACTCCTGTCCCACCTCAACCGGCACATAGGTATCACTATAGAACATGGCGTGGAATGCTGCGACGTCACCTTCAACACCAAGAAAATGTTCGTGAACCATCTGCAGGAGCATCACGTCTTACGAGCCCCGGAAGTTTTAGCGAACAACTGCCGCACTTGCGGGTACTCAGCGAAAGACCTACAAGATCTCCAAGCGCATATATCACGCAGCCACAACGACCGcgacaaaacaaaaaatgtgaAGGAACGAAGTTCCAAAAATCAGAAATGGATCCCGGCCGTATGTCCCGAATGCAATAAAGTGTGCTCAAATAAATACAACATGTTCGTCCACATGAAAAGCCACAGCAAGACTGCGACCAAGTTCACCTGTGATAAATGCGATAAAAGTTATGGTTACCAAGGAAACCTCAGATATCACCAGAAAGTGGCGCACGAGGGGGTTTTGAAGTACGCATGCGAGGTATGCGGCGAAGCGTTCCCCACGCGGCAGGCGCGAACTGTGCACACGCGTCTGCACACCGGCGACCGCCCCTACTCCTGCGACTACTGCTCCAAGTCCTTCCGCGACAAGCTCACCCTCGAGCGACACATCGAGATGCACCTCGACATCAGAAAACACATGTGGAACTGGGGCGTAAAACGCGAAACTAGTCCCGAGCGCCGCGACAATGCGTGCGCTAGTACATTATCGTCCGACGACGAGCTAGACTCCATCGACGACGATGACAGACCGCTCGCGACGATGGCTAGCAAGAAAACTGATATGTACAGCAACTTCTACACCGCCCTAGTGAACTTTAGAAATCACTTCGTCCAGGAACACGGACCGGAAAGAAGGCCGCAATACATCGACTCGAGTGACTCAGAAATCGCAAGCAACGACGAGGGAGGGATGGACGATGCGAACGTGGACAGCTACGACGACCTGACGCAATGCAACATGAGAAAGGACAGATTAGACGAGAATACTCGAGTGGAGTTAAGCGAGGTCCAGACGAAAATCAACGGGAAAGTATTCTACACGTGCCGGACGTGCGGCAAGAACCTCAGCTCGCCGCACACGTACGTGTTCCACAAGCGCATCCACACGGGCGAGCGGCCGTGCGTGTGCCACGTGTGCGGGAAGCAGTTCCGCGCGCCGAACGGCCTGCAGCGGCACCTCACGGAGACACACGAGCGCGCGCGAAGGCACGCCTGCCGGCTCTGTTTGAAAGACTTCGCGAACACGCAGAACTTAAAGCAGCACCTGAGGATTCATACGGGGGAGAGACCGCACGAGTGCGGGCAGTGTGGGAAGCGGTTCGCGCAGAGCGGGTCGCTGTACGTTCATCTGAAGACGCACGGGGGGCCGCCGGCGTTTGCCTGCGCGGAGTGCGGCGCGTCGTTCCGCCTGCGCTCGTCATTGGCCCGACACGCGCTGCGGCACTCGGGCGAGCGGCCGCACGCGTGCGACTGCGGCCGGCGCTTCCGCTCGCGCCACGAGCTGACCTCCCACGCGCTGTCGCACTCGGACGTCAAGCCCTTCTCCTGCCTCGTGTGCGGCGCCGCCTTCCGCCAGCGAAGGGCCCTCCGCCATCACACGAAGAGGGTCCACGAGGTCCCCGGCCCTCCTAGAGAACCGCCTCCTCCGGAAATAACGCACTCTCTTGTTTATACACCCGAAGCGCCCGCTCAAggggaaaattttaaaatagaaataaagatcGAGCCGGGTTGTGATGTGCCGAAGCATCGGGAGGACATTGAGCGTCCGCGCGACGTAACTGTCGGGTCGGACGGCAAGCGCTACGCCACGTGTCCCCACTGCGGGCGCAGCGTCAGCGTCAGCGCGTGGCGGCGGCACTGGCGCACGCACCGCGGCGAGCGGCACTACAGCTGCCACACCTGCGGGCTCGCCTTCAGCGACAGCGGCAACCTGGCGCGCCACGCCCGCGCCGTGCACGCCCATCACCGCCCACACCGATGCCCCACCTGCCTCAAAACCTTCTCCCGCCGGACCCACCTGGAAGACCATCTTAAATCCCACTCGCCCAGCCGCGAGTTCGTCTGCGACGTCTGCGGGAAAGCCTCGAAGTCCGGGGCCGCTCTGAGAATGCACAGCAAGACCCACGACGCGTgcagGTTCCGCTGCATGGAGTGCGGGTCGCAGTTCAAGCGGCGCGGCGAGCTGCGCGCGCACGTGTCGGTGCACACGGGCGAGAAGGCCTATGTGTGCGCCTGCGGCCGCGCCTTCAGGCTGCGCAGCCAGCTCACTGCCCATGCCAGGACGCACAGTACCGAGCCTGTTAAGGAAAGCTAG
- Protein Sequence
- MSNATEQIFLLSPPVGQPTSGLEKAPGPAASQQINLHDVKDFSSVCRTCATVTQYVIPIFEGDGLLNKLAEKIHKHLPIQVSEKDVLPRVMCYQCASTLLAWHELVQCCVQADAALRTRLAVAPAIHPSPTSRPGTNSQVVASPPVEVGTAGPGASFSSKVIAATTFAAADAASAEERLGRGTQTEPEMCAENAANQDDKREQHPAFKYENYICAQLKDILTDYFPTISVKGDTLDIEFVCQKCEERPAAYSIEQLASHILTMHSDKSSEIKKFVENYITLKETLSSGDSDRDIAPEPTAKNPESLPNFFCPFCESIFSSSTRLLSHLNRHIGITIEHGVECCDVTFNTKKMFVNHLQEHHVLRAPEVLANNCRTCGYSAKDLQDLQAHISRSHNDRDKTKNVKERSSKNQKWIPAVCPECNKVCSNKYNMFVHMKSHSKTATKFTCDKCDKSYGYQGNLRYHQKVAHEGVLKYACEVCGEAFPTRQARTVHTRLHTGDRPYSCDYCSKSFRDKLTLERHIEMHLDIRKHMWNWGVKRETSPERRDNACASTLSSDDELDSIDDDDRPLATMASKKTDMYSNFYTALVNFRNHFVQEHGPERRPQYIDSSDSEIASNDEGGMDDANVDSYDDLTQCNMRKDRLDENTRVELSEVQTKINGKVFYTCRTCGKNLSSPHTYVFHKRIHTGERPCVCHVCGKQFRAPNGLQRHLTETHERARRHACRLCLKDFANTQNLKQHLRIHTGERPHECGQCGKRFAQSGSLYVHLKTHGGPPAFACAECGASFRLRSSLARHALRHSGERPHACDCGRRFRSRHELTSHALSHSDVKPFSCLVCGAAFRQRRALRHHTKRVHEVPGPPREPPPPEITHSLVYTPEAPAQGENFKIEIKIEPGCDVPKHREDIERPRDVTVGSDGKRYATCPHCGRSVSVSAWRRHWRTHRGERHYSCHTCGLAFSDSGNLARHARAVHAHHRPHRCPTCLKTFSRRTHLEDHLKSHSPSREFVCDVCGKASKSGAALRMHSKTHDACRFRCMECGSQFKRRGELRAHVSVHTGEKAYVCACGRAFRLRSQLTAHARTHSTEPVKES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -