Mfla012626.1
Basic Information
- Insect
- Mecyna flavalis
- Gene Symbol
- -
- Assembly
- GCA_949319885.1
- Location
- OX439422.1:4933975-4935144[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.88 1.1e+03 0.7 0.0 15 26 31 42 27 55 0.85 2 9 0.0096 11 7.0 0.1 12 43 81 109 77 110 0.80 3 9 8.5 1e+04 -2.5 0.4 18 28 160 170 147 178 0.70 4 9 1.4 1.6e+03 0.1 0.1 18 24 188 194 179 201 0.82 5 9 1.4 1.7e+03 0.0 0.1 17 28 215 226 206 234 0.85 6 9 2.2e-05 0.026 15.4 0.4 13 43 241 268 227 269 0.85 7 9 0.031 37 5.4 2.7 5 25 262 282 262 284 0.91 8 9 0.0046 5.4 8.0 1.2 14 38 299 320 289 321 0.81 9 9 0.00031 0.36 11.8 0.7 14 43 327 353 319 354 0.90
Sequence Information
- Coding Sequence
- atgGAGACAGCGAGAAAGCTCCTTGTTAAACGAAGGAATATTGAATACGTCCTGCAGTATGGCAATGTTACCCCCTTTCTGTGGTACAAGGGCAAGTACCGCTGCTTCTACTGCACAGAGCCAATAAAAGATCCAGTGTTGCTCAGAGAACACACAGCCACACTCCATAAAACTGTCAACTTGGAGGCCGTAGTGCAGTACCGGACGAAAAACAACAGAAACAAAGATGCCGCTGTCAAAATTGACGTAACCGACATTGCGTGCAATATTTGCGATAAAGCTGTCGTCAATCTAGAAGAATTGATACACCATCTCATTCTAACTCATGATGCTGAGTATGATGTTAGCGTTCCTAACTGTCTACTGCCTTTTAAGCTTGACAAAGAACAGCCAACATGTCCCACTTGCAATATGAAGTTTGTCTTCTTCGAATATCTTCTACGCCATGCTAATAAGCACCATCTGTCCCATGATTATATATGTGATGTATGCGGAACTAGCTTCCAAGGGGAGAACCATTTGAAGATGCACAATAGATACTATCACAGGCAAGGGGGTTACACCTGCGACCATTGCGGCGTAAGTCTTGCGACGTTGTCTAAAAAGATTTTGCACGAGAAGAATGTGCATCAGATGAACTTGTACACGTGCCCTCACTGTCCGGAGACGTTTAAGAGTCCGTATTTTAAGAAGTTACATTTGGCGAACGTCCACGGTGTGGAAGAGCTAAAGATCAAATGCCCTTACTGTCCAAAAGTGTACCCTCAAGAGAGTATAATGTCCAGGCATATGAGAAGGGTACATCTAAGAGAGAAAAACGTTGAGTGCGAAGTGTGCGGGGATAAATTCTTTTGTCCCTACGATGTGAAATTACACATGGTAAAACATAATGGGGAAAAGAAATTCGTATGTACTGTTTGTGGAAAGAAATTTGCGAAGAAAAGTAATCTTAATGCACATTCAGTACTGCACACTGGTGAGAAGAGATTCGTTTGTGTTATTTGTAACAAATCTTTTGCGCAGCAGACGAATTTCAAAGTTCATATGCAGTATCAACATGACAGCTCGAAAACAACCGAGATACAAGAACTGGATCCTAGTGAAATGGTTAGAATAGAACTTATTGGTGGGATATCAGAGGCAACACTACTAGCCACAGAAATACAGTGA
- Protein Sequence
- METARKLLVKRRNIEYVLQYGNVTPFLWYKGKYRCFYCTEPIKDPVLLREHTATLHKTVNLEAVVQYRTKNNRNKDAAVKIDVTDIACNICDKAVVNLEELIHHLILTHDAEYDVSVPNCLLPFKLDKEQPTCPTCNMKFVFFEYLLRHANKHHLSHDYICDVCGTSFQGENHLKMHNRYYHRQGGYTCDHCGVSLATLSKKILHEKNVHQMNLYTCPHCPETFKSPYFKKLHLANVHGVEELKIKCPYCPKVYPQESIMSRHMRRVHLREKNVECEVCGDKFFCPYDVKLHMVKHNGEKKFVCTVCGKKFAKKSNLNAHSVLHTGEKRFVCVICNKSFAQQTNFKVHMQYQHDSSKTTEIQELDPSEMVRIELIGGISEATLLATEIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00075803;
- 90% Identity
- iTF_00961207;
- 80% Identity
- iTF_00961207;