Basic Information

Gene Symbol
-
Assembly
GCA_949319885.1
Location
OX439429.1:18290005-18298491[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.1e-06 0.0067 17.4 0.0 4 35 949 983 946 988 0.86
2 2 4.5e-09 7.4e-06 26.9 0.0 2 43 1028 1074 1027 1076 0.86

Sequence Information

Coding Sequence
ATGCGAACCATCACAGGGCTAATTAAATCCACTCCTCTGCCATGGCTTCCTGTTCTGGCACACATTGCTCCCCCGGATATACGCAGGCGTCATGCAGCGGCGAACGAGTGGAAGAAGTGCTGGCAAGAAATAAATGGAGAGCCGATGCCAATCCGTGGGACACTTGACGGACTGCCTCCTGAGCGACTGCCTTCTAGATCCCCTATTTGGTTGGATAGTGCGCACCAGGAATATAACCCTCAAAGCGAGTGGCGTAAATCCTGGGAAAGTTTCCAGCACGACCCGTGGAAGGGACTGATACCGGACCCTACTGTCAAACCTGCTGGTTTTGACAGTAGTCGTACTGTATGGACGAGGGTTAATCGGTTCAGAACCGGCCACGGGAAATGTAACTACCACCTCCATAAATGGGGTCTCCGAGATGGGccggattgtgactgtggggctCCAATCCAAACAATGACCCATATTGTTGAGGAATGCCCTCTCCGTCGTTTTTCTGGTGGCCTTAATACTGACCACCGTATGGTAAGAAGCTGCCTAAGCCTAAACCAACCCAAAAGATCCAGGAAAAATAtagcaaataataaaaagctGTGCCAAATACAAGAACACAGCCATTCCACTAACTCCCACACAACTGAATCACTCCATGAAACTATTAACTCTGACGAAGAAATAGGGATCAAATATAGAAGACTACAAAACAAATTGAAAGAGATGCTAGTCATCAAACCCAGAAGCAAAGAAAGCTATTTAAGCAAAGAGACACTAGAACTACTAGACGAAAGAAGAACACTAATATCAAATAAGGGGGACAAAGAAAGACGCCAAAAAATTGCAAACCTTAGCAAGAAAATCAAGGAGAATATGAGGAAAGACCGCAAGGAGAAAAGAAATAGAGTTCTGgaagaaaacataaaaagaacAGGAGGAACAAAAAAGGCTATGAAACAACTAAACGAACATGGTAAAGAATGGATATCTAAGCTAAAGCAACGCGAATCTTACTTAACTAATCGACTCTCAATACAGAATCTAGCTACGGACTATTACCGCCTATTGTACTCTGACAAATTCGATTTAGAATTGGACACAATCCCGGAAGTAAACGAagcaaaagaaaacaaagtagACGAAGTGCCAGAAATCCTTGCCTCGGAGGTAATCAAGGCAATAAAATCCCAAAAACTCGAGAAAGCCCCAGGGCCGGACAAGATACCTAATGAAATGCTCAAGGGAACCTTAGAGGAAATCAGTCCTGTGCTGGCAAAACTTTTCAATGAAATCCTACGAAAAAAACAAATTCCAGAGGAATGGACCGAGTGTCACATAATTCTACTTCATAAAAAAGGCCCTAGAGACGAGATTGGGAACTACAGACCAATCTCCCTAATATCAAACATATACAAAGTATTTGCCAAAGTGATCCTGGAAAGAATATCATCAACACTAAACGAAAACCAACCAGTAGAGCAAGCAGGATTCAGAAAAGATTTCAGCACAATAGATCACATTCACACAATAAAACAGTTGTTGCAGAAATATAATGAATACAATAAACAAATCTACTTGGCGTTTATAGACTATTCAAAGGCATTCGACAGCCTAAGGCACCAATACATATGGCGGAGCCTTGAACAACAAGGGGTCCAGAGCAGCTATATAGAAATACTTAAGAGTATATACAAATCTAGCAAAGCCAACATCAAACTGGAATCAACAGGAGAAACATTTCCAATCAAAAAGGGCGTACGCCGAGGCGATCCTCTCTCCCCTACTTTATTCAACGCCGTACTCGAGCACATCTTCAGACAACTAAACTGGGATCACTTAGGTCTGAACATCAATGGAGCTCGCCTAAACCACCTAAGATTTGCCGATGATTTGGTGCTTCTTGAAGAGAAACCAGAAGCAATAGAACAAATGATGCAAGGACTAGCAAATAAAAGTAGAGAAGTTGGTCTGGAAATCAATGCcagtaaaacaaaattgatgaCAAACTCAAGGGAAATAGACGTTATGGTAGATGACAACAAGATCGAATATGTCAAAGAATACATTTACTTAGGACAGATAATATCCCCCTCAGATGaaatgacaaaagaaataaacagGCGAATAGCCCAAGGTTGGAGAAAATATTGGTCACTGAAGGAGGTAGTAAAAAGTAAGGACCTAAGCAActacacaaaaaagaaaacattcgaGACCTGTATTCTGCCAGTCCTTACCTATGGCTGTGAAACTTGGTCGATAACACTTCATCACAGGGAAAGACTAACTAAATGCCAACGTGCTATGGAAAGAAGCATGCTAGGGATAAAGATCAAGGACAGAGTCAGGAACATAGACATAAGAACGAGAACAAAACTAACAGACATTCTCACCCGGATAGACGTCCAAAAGTGGATATGGGCTGGACATATGATACGCCACCCTATTAACAAATGGAGCAGGCAAGTCACCCTCTGGCAACCAAGAGACGGCAAAAGAAGCAGGGGTCGTCAAATCAGGAGATGGGAAGACGACTTGAAGCAGACAGCGGGACCATTCTGGTTGAGAGTGGCAAGAGACAGGACCCATTGGAAGGaattggaggaggcctatgccaAAAGGCACACCGAACTTAGGGACTTTTTGGAGGAGGAGGAGCGGCTGCGGGCGGAGCGCGAGGCGGCGGCGGCCGAGGCGCGCGGCGCGAGCGTGCGCAGGCGCCGCGGCTTCGAGCCGCCCGCGCGCGACCACTGCCTGCTCGACCCGGCCGACGAGCCCGACCCAGCCGACGGGCCCGTCGCCGTGCCTGTCAGACCACCGGCCCCACCGGTGATCAGCGGAGGGTTCTGGTCGGACGACGACCTGGCGGAGCTGGTGCGGCTGGTGAAGAAGCACCCGGGCGGCTCGGCCGAGCGCTGGGAGCGCATCGCCGACGCCATGGGCCGCAGCGTGCCCGAGGTCACGCACATGGCCGCCAAGCTCAAGGAGAACTGCTACAAGATACCGGGCCAGGACGCGGCGGAACCCATAGTGCAGGACCCGCCTAAGAAGGTGAAGACGCGCAAAGCGGACGAAGGCACGGGCGGCGTGTGGTCGCAGCCGCAGCAGCAGGCGCTGGAGGCGGCGCTGGCCAAGCACCCCAAGGGCGGCGCCGGCGACCGTTGGCAGAAGATCGCCGCCGCCGTGCCAGGGAAGACCAAAGAGGAGTGCATGCAGAGGTGTAAATATTTATCAGACCTAGTTAAGAAGCAGAAGCAGAAAGATGACGAGCAACCGAAAGACGAGACTGACGCGCCCGAGGATGCGCCCGCCGAGGCAGACTCATAA
Protein Sequence
MRTITGLIKSTPLPWLPVLAHIAPPDIRRRHAAANEWKKCWQEINGEPMPIRGTLDGLPPERLPSRSPIWLDSAHQEYNPQSEWRKSWESFQHDPWKGLIPDPTVKPAGFDSSRTVWTRVNRFRTGHGKCNYHLHKWGLRDGPDCDCGAPIQTMTHIVEECPLRRFSGGLNTDHRMVRSCLSLNQPKRSRKNIANNKKLCQIQEHSHSTNSHTTESLHETINSDEEIGIKYRRLQNKLKEMLVIKPRSKESYLSKETLELLDERRTLISNKGDKERRQKIANLSKKIKENMRKDRKEKRNRVLEENIKRTGGTKKAMKQLNEHGKEWISKLKQRESYLTNRLSIQNLATDYYRLLYSDKFDLELDTIPEVNEAKENKVDEVPEILASEVIKAIKSQKLEKAPGPDKIPNEMLKGTLEEISPVLAKLFNEILRKKQIPEEWTECHIILLHKKGPRDEIGNYRPISLISNIYKVFAKVILERISSTLNENQPVEQAGFRKDFSTIDHIHTIKQLLQKYNEYNKQIYLAFIDYSKAFDSLRHQYIWRSLEQQGVQSSYIEILKSIYKSSKANIKLESTGETFPIKKGVRRGDPLSPTLFNAVLEHIFRQLNWDHLGLNINGARLNHLRFADDLVLLEEKPEAIEQMMQGLANKSREVGLEINASKTKLMTNSREIDVMVDDNKIEYVKEYIYLGQIISPSDEMTKEINRRIAQGWRKYWSLKEVVKSKDLSNYTKKKTFETCILPVLTYGCETWSITLHHRERLTKCQRAMERSMLGIKIKDRVRNIDIRTRTKLTDILTRIDVQKWIWAGHMIRHPINKWSRQVTLWQPRDGKRSRGRQIRRWEDDLKQTAGPFWLRVARDRTHWKELEEAYAKRHTELRDFLEEEERLRAEREAAAAEARGASVRRRRGFEPPARDHCLLDPADEPDPADGPVAVPVRPPAPPVISGGFWSDDDLAELVRLVKKHPGGSAERWERIADAMGRSVPEVTHMAAKLKENCYKIPGQDAAEPIVQDPPKKVKTRKADEGTGGVWSQPQQQALEAALAKHPKGGAGDRWQKIAAAVPGKTKEECMQRCKYLSDLVKKQKQKDDEQPKDETDAPEDAPAEADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-