Mfla004631.1
Basic Information
- Insect
- Mecyna flavalis
- Gene Symbol
- -
- Assembly
- GCA_949319885.1
- Location
- OX439411.1:13534613-13536877[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-10 3.5e-07 30.7 0.0 2 38 16 52 15 56 0.92 2 2 9.5 1.6e+04 -3.4 0.0 7 15 364 373 363 373 0.84
Sequence Information
- Coding Sequence
- ATGGTGCGCACGTACAAACCCAAAACTGATAGAAAAAATATCAATGAAGAAAACATTGAAGATGCAATACGTGAAGTATTGTCAAAGACTTTATCTATACGCAAAGCAGCCGACAAATATGGCATCAAAACTGCAACCCTACAACATCGCATAGAAAAAGCCAGAAAATCATTTGAAGCTACCAGAACATTATCTACAAATGAAGTATCCTCTTCATTACAAGCAGAATCTTCTTTATCACAAGCAGGTCCATCTTCACCACAAATAGCACCATCCATGGAGATGGCACAAATAGCATCATCTTCAGCACACACTACTACTGCAGCTTTATCATCACACACTGCTACAGCTACTTCATCAAACATCTATGGTTCCAAGTATACCGTTGCACAAGTTTTTTCAACCGAACAAGAAAAGGCATTGACTCAATATTTATTGAATTGCAGTAAAATGCACTACGGCCTTACATTGAAACAGCTTTTGACTTTGGCATACGAGTACGCAGAATCCTCAGGGTGTAATTATCCAAAATCCTGGAAAGAAAACAAATGCGCTGGAAAAGATTGGGCAGCTGGCTTCAGAAAGAGAAACCCAGAATTGAGTCTACGAAAACCAGAAAACACAAGCGCAGCAAGAAGCTTTGCTTTCAATAAAGCTGCTGTAGCTCAATTTCATGATAATTACGAACGCATAATGAGACAATACAATTTTACATCGGATCGAATAATAAACTTAGACGAAACAGGCATAAGCACAGTCCTTTCCACTCCTAAAGTTATTGCTGGAAGAAAACAAAGACAAGTGGGACAAATAGTTTCTGCAGAACGCGGAGAGTTAGTTACTTTCTGTGGTATTATTACTGCAACTGGTTCTTCTCTTCCTCCAGTTTATGTTTTTCCAAGAGTTCACTATAAAGATCACTTCCTAAATGGTGCTCCTGATGGAAGTCTAGGGTTGGCAAACAGAAGCGGCTGGATGACATCAGAATTGTTTATAAGAGTTTTGAAACACATTCAACGCCTTACTTTGAGCAATAAAGATAACCCAATTCTAATAATTTGTGACAACCACGAATCTCACATTTCAATAGAAGCTGTTAACTACTGTCGTGACAACGGTATTGTTTATTTGAGTCTTCCCCCACACACGTCACACAAATTGCAACCGCTTGATGTCAGTGTGTTCGGACCCTTTAAAAGCAAATTGAAGATAGCTTTCAACGACTGGCACATTCAAAATGTTGGAAAAACTTTGACCATATACAACATTGCTGAACTGTCAAAATTAGCATATTTGGAATCATTTACACCAAAGAATATCATAGGTGGTTTTTCCAAACCTGGAATATGGCCAATTAATAAACTGGTATTTGGCGACGACGACTTTGCACCGATAGACATTTTCAGCACAGGTTATCACGATTTGACAGATGAGAACACTCACAACACACAAGATTTACATTTTGTAGACGCAGAAACAAGCCAAAATAATGAGATTGTTgataaagaacaaaataaatctcCTACTTTGGATGCCGACCCAGTTTCAGTGTCTGATGCTGACGATCCTCTGCATGTTTCTTCATCAAAGGCTATTCTTACTCCTGAAGTTGTTAGACCTTATCCAAAAAAGGCGATTACTGACAGTGTCTTAAAAAGAAAAGGAAGAGAAAAGGGACGATCAAGAATATACACTGAAACACCAGAAAAAAATAGATTAGAAAGCTTACGTAATGAAAAGGACAGGAAAAGAGAATTACAAAAAGCAAAACAGCATGCAAAAGAATTGAAAACAGCGAAAAATCTGTTGGGATTAACTGAGCCAAGAAAGAAAAAGAGAGTGGCTTCTTTACCTGCAGAAATAGATTCCGATTCTAGTCAAGATGAAGTCGTGATGACGAGTGATAGTGAAGACATTGAAATGCCATCGGAATCAGAAGAAGAGGTAATTAATGAAGAACCAGTTAATCCTGAACACATAAATATTGGAGATTTCCTGCTAATTAAGTTTGAGAAGAAGAAAACTGTGATTTACTACGTTGCCAAAGTGGTATTTAAGTATAATGTGACAGAATATGAAGTATTATATCTCAGAAAAAAAGCAGGGTCTTCTAAGTTTGTATTTCCAATTGTGGAAGACAAGGCAAGTGTGGATGTTAGAGATGTAGTTTTGCAATTACCAAAACCAACTTTCTCCAAAGGCACATCTCGAACATCGTCGCTTTATTCATTTTCCGTAAGTTTAACTCGATATAATATACAGTAG
- Protein Sequence
- MVRTYKPKTDRKNINEENIEDAIREVLSKTLSIRKAADKYGIKTATLQHRIEKARKSFEATRTLSTNEVSSSLQAESSLSQAGPSSPQIAPSMEMAQIASSSAHTTTAALSSHTATATSSNIYGSKYTVAQVFSTEQEKALTQYLLNCSKMHYGLTLKQLLTLAYEYAESSGCNYPKSWKENKCAGKDWAAGFRKRNPELSLRKPENTSAARSFAFNKAAVAQFHDNYERIMRQYNFTSDRIINLDETGISTVLSTPKVIAGRKQRQVGQIVSAERGELVTFCGIITATGSSLPPVYVFPRVHYKDHFLNGAPDGSLGLANRSGWMTSELFIRVLKHIQRLTLSNKDNPILIICDNHESHISIEAVNYCRDNGIVYLSLPPHTSHKLQPLDVSVFGPFKSKLKIAFNDWHIQNVGKTLTIYNIAELSKLAYLESFTPKNIIGGFSKPGIWPINKLVFGDDDFAPIDIFSTGYHDLTDENTHNTQDLHFVDAETSQNNEIVDKEQNKSPTLDADPVSVSDADDPLHVSSSKAILTPEVVRPYPKKAITDSVLKRKGREKGRSRIYTETPEKNRLESLRNEKDRKRELQKAKQHAKELKTAKNLLGLTEPRKKKRVASLPAEIDSDSSQDEVVMTSDSEDIEMPSESEEEVINEEPVNPEHINIGDFLLIKFEKKKTVIYYVAKVVFKYNVTEYEVLYLRKKAGSSKFVFPIVEDKASVDVRDVVLQLPKPTFSKGTSRTSSLYSFSVSLTRYNIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00634310;
- 90% Identity
- iTF_00634310;
- 80% Identity
- -