Mmes016922.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mechanitis messenoides
Gene Symbol
zfpm1
Assembly
GCA_959347415.1
Location
OY365768.1:13075996-13081407[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 3.7 3.4e+02 2.7 0.3 2 23 6 27 5 27 0.94
2 13 3.8 3.5e+02 2.6 0.2 1 23 1045 1067 1045 1067 0.92
3 13 8.3e-05 0.0077 17.3 1.6 2 23 1070 1091 1069 1091 0.96
4 13 0.011 1.1 10.5 3.3 1 23 1097 1119 1097 1119 0.98
5 13 0.013 1.2 10.3 2.8 2 23 1126 1147 1125 1148 0.95
6 13 0.21 19 6.6 1.5 6 23 1162 1179 1160 1179 0.97
7 13 0.016 1.5 10.1 1.1 3 23 1186 1207 1185 1207 0.96
8 13 0.018 1.6 9.9 0.1 2 23 1220 1240 1219 1240 0.96
9 13 0.0033 0.31 12.2 1.8 1 20 1246 1265 1246 1268 0.88
10 13 0.0069 0.64 11.2 1.4 1 23 1276 1298 1276 1298 0.98
11 13 0.0047 0.44 11.7 7.2 1 23 1304 1326 1304 1326 0.98
12 13 5.5e-06 0.00051 21.0 1.3 1 23 1332 1356 1332 1356 0.98
13 13 0.00086 0.08 14.1 5.1 1 23 1362 1384 1362 1385 0.95

Sequence Information

Coding Sequence
ATGGATCAGAGAGTGCAATGTCCCGTGTGTACACTCTACCTTCATAGTGGAATGTCCTTAGAGTCACATTTGGACACACATCCAAAAGATCAAGTCATAAAGGCATTGTGCTGCCTTTCAAAgggtagtagtagtagtagtaacaCATTTAGTAGTAGAACACCCACCCCCCTAACCTCAGAGAGGTCTTACAGGAGTAGGTCAAGAACACCTGCTACTGATGATAGTGGTAGATGGGTTACATCACATCGCAATAATGAAAATGACAGATTTTGGAGGAGGACTCCAAGCCGAACAAAATCTACCCCAACTTCTAACACTTCGAGAAATCCCACACCAGACCTCAGAATAAGCAGTATTACTTTTGAAAACACATCAAATAACAATTCCAGTCAATGTTCAGACTCCTATACTGTGAAATCAGATAAAACACAGCAGACATTTGGGTCAAATGCTCCATCTTCAGACTTTGATCAACCATATCCTTTTTTTCCGGAGCAACAAGAAGATCCAGAGATAAAATTTTCACGTAGCTCAGAATACAGTACACAAATTGAAAATCCAAGTAATATATTTGGGTACAATATGTCAATCATGGGATCCAGTGATAAAATGCCTTCAACAACACCAAACACATCTAGAAAGGGTAATGACTATGTCAAAATAGTACCAAAACCTGGAAATATTCTGTTAAAAAGCAATGTTGGAGCAATGCAGTACCTGGCACCAGGAATAAAACCTTTGCATGTTATGATGCCAACTACTCCACCCTTTGTTCAGAAGAATTTGCAGAACAACATGATTATGTCTGGAACATTACAAGGTTCCCCAATCGTAGACCCAAAAGCAATACCTTCTTCGCATACAAACCAATTTAATCAAATGACACCAGGCACTACAGTTGTTACTCaaaattcacaaattatttatagagagATGGTTCATAACTTAGATGGCAAACCATTTATTTCCAGCGTGCCTCCTGCACTTGGGAACCAAGAGAATGTCACAAATGTAGCACAATCTAGTTCAGTGTACCAAAATGTGATGGTTGTGGACCAGTTTGGTAATACTTCATGCATGTACACACCTCCACATCTATtgtctaaaacaaataatacttttaatgaaaatgtacCATATATGCAAAATGTGCCAGAAAAGTCTGTTCCTACAGTAGTTAATGATGCAAATAAAACTCTAATTATTGAAGTAAGTCCTATGTTACCACCTGGAACGCCTAGTATTAGTGGTGCTGGTGCAACTGAGCAAACAGCTAATAAGAAAATTGAACGAGAAAAGTCAGATTCAAAGAACGATACTACAGGACCCACTAAAGGTCTTAAAATTCTAAGCAATATTAAGGTGGAAGTTCCTGTACAGCATCacaaaaatatgcttaatacTGTTATGGATCTGACAGGAACAACTGATGCAGAATATCCTGACCCATCGGTTACACCAGAAACAATCCTACCAGATTTAAGTGACAATAGCCCAAGTGTAACTAATGACTGCACCCAGTCCTCAACTATTAATGTTGATAGCTTaggttcaaatttattttctgttatcAAAAATCCTAGTAACTCATCATTCAAAGAGAGTATTGGAAAGCCAGGTATTGTGGATAATAAACTAGATGCAGAGTTTTCGGATAGCTGTCCTGTTCCTGATCTTACATGCAATGAGAAGCCATCCATATCGCCTTGTAGCGAGTTATCAGAACATGGAGATAATTCTCTCGATTGTACTTCTCCTTTGCCTAAACCTGAAAGCAGTCGATCACAAAGCCTTGCAAACAAAATGGACAATGGAAAGAAGTCTGTTACAAAAACAAGAAACAACCTTCTTAGGCTTAATAACatctttgtaaaaaaacataaaaaaattctacaaataaaaaatgctaaaTTGTATCCACCTAATTTTACTAGCCAGGCACAAGAACCGAGGGAATCATCTTCATCAAATAAATCGCCAGAAAACTTTagtatcaataaaattcattctGAGAATGCAGATTCCAAGTCAAGTGGAAGCATTCATACTATtagtattgaaaaaattaaagctaTTGAGGAACATCAAAATGAATTCGATGCTAATACAGAGGAACAATCCATGGATATCGAACCTGTAACACCTTCTAATGTGAACCACAACAACCACTATACTACCACCGTTGATATGGTTCATGTGAAAGAAGAAGTGAATTCAAGTAATGACTTTAGCAATGAGGATAGATCATCTACAGATATTGCACCCATGGAGTCTCTGAGgcctataaatgtaattaattacagtAACATGGGAGGGGATTTTGATGATGAATCGAATCATAGAGAGCTTTTGGAATTAGAAGCGGCGTCTAAAAACAAGCAATTTGTGTCGATGATGAATGAGAATTATTTCGGGGACAACATCTATGCGGATTATTTCACTCCAGATCGTGTAGAAGCATTCGAAGCTGCAAAAGAAGATAATTATTGCAAAGAAAATTCGAAAGATTCTATGTATATTTGGGGAGAACCATCACAGAAGGAAAGTGAATTTGTTTTGCCTAATTTCATTCATGAAAGTTACAAAATTGCTGAGAACGGAGTTGATTATTCGGATATAACCGGTGATAACCAGGCGGATGCGGAAGTGGACAGGTGTGAGAGAGATAGCAAAGCGGACGTGTTGAGTGATCGTAGTGAAGGTGAGGCTCCCTTAAACATCTGCTCGGACGAGAGGATGCCCCCGCGGGGTGAAATCAGTGGGCAGGAGAGCAACGGAGACATGGAGTCGCCGTGGACCGGGATGTACTCCGGTGCGCCGCCGGCGGAACCTTACGACCTCATGGCCCGAGAGAGCTGGGTCTCCGATGCCTCGGACGACGACGCAAACGAAAAGACTGATAATATTGCGGCGGGGCGGCGGGCGCGCTCGTACGGGCGCCTGCTGGCGGCGCGCGCCATCAAGAAGGAGGAGAAGCCCGACGAGTCCGTCCTGGccggCAATCTCCTGACATTAGACTCTAAGGAGTCCATGACGACCACCATGTTACAAGTGTACGACGCTATGAACGAAACGAAGCCGCAGATAGAGGGGCTCATCAAATCGGAAAATAGAAAGAGACGGCGAGACTACGTATGTCCCACTTGTAAAGTGGATCAGATCACCGAGGCGGGGTTCCACGCTCATCTCAAGATACATCCGCTAGAGTGTCTCACGTGCGGGAAGTGTTTCTTCCGACGAGCCAATCTAGCGCTACATGCAAAGACACATACGggaattaagaattttaaGTGCGACGTCTGCGAGAAACGCTTCCTGACGCGGCAGAAGCTGACGGAGCATCACAACGTGCACACCGGCCGCGCGCCCGTCAAGTGCACCCTCTGCGACGACACCTTCCGCCGCTACTCCAACATGGTGCAGCACAGGGACCGCCATCACTACAAGAAGAAGGCCAAGGTGCGCGACTTCGTGTGCTCGTGTGGCGCCGTGTTCCACTCGCGCGCTAAGCTGCGCTGGCACCGCGAGACGCACGACGAGCGCCCCAAGGCCTGCCTCTACTGCAGCGACAAGTTCGTCCACGCCGCCTCGCTCACGCGCCACGTGCGCCGCTCACACAACGACCACTACGCGCGCGCGCAGCGGCACAATGTGCCCTGTCCCGTCTGCAAGCAGATGTACCTCCGGACGAATTTACGCGCGCATCTGCTGACGCACAGCGGAAAGCGTCCTTACCACTGCATCATATGCAACAAGGCGTTCACAACCAAGTGGAACCTGAAGCTGCACAGATGGACGCACCTCGGCCGGTCGGCGAAGCCGTACAAGTGTACTCTGTGCAAGGGTGCCTTCATCAGACACACGGAGTACGTGTCCCACATGAACGCTCATAAATCCGTTCGACCCTATACTTGCAACTACTGCGGCTGCCAGTTCATACGAAAATACAATTGCCAGAGGCATGTCCGCGAACACGAAATGGCGAAGAAGTACGTGTGTAAAGTGCCGGAGTGCGGTAAATCGTTTCATAGAAGCTACTACCTTTCGGAGCACATGAAGGTGCACAGCGGGGCTCGCCCCTTCTCGTGTAACATATGCGGGAAGACGTCGAGCAACAAGTCCAACCACAACAAGCACGTGAAGATCCACCACGCGCGGGAGCCCGTCGCCACGGAGGCCTAG
Protein Sequence
MDQRVQCPVCTLYLHSGMSLESHLDTHPKDQVIKALCCLSKGSSSSSNTFSSRTPTPLTSERSYRSRSRTPATDDSGRWVTSHRNNENDRFWRRTPSRTKSTPTSNTSRNPTPDLRISSITFENTSNNNSSQCSDSYTVKSDKTQQTFGSNAPSSDFDQPYPFFPEQQEDPEIKFSRSSEYSTQIENPSNIFGYNMSIMGSSDKMPSTTPNTSRKGNDYVKIVPKPGNILLKSNVGAMQYLAPGIKPLHVMMPTTPPFVQKNLQNNMIMSGTLQGSPIVDPKAIPSSHTNQFNQMTPGTTVVTQNSQIIYREMVHNLDGKPFISSVPPALGNQENVTNVAQSSSVYQNVMVVDQFGNTSCMYTPPHLLSKTNNTFNENVPYMQNVPEKSVPTVVNDANKTLIIEVSPMLPPGTPSISGAGATEQTANKKIEREKSDSKNDTTGPTKGLKILSNIKVEVPVQHHKNMLNTVMDLTGTTDAEYPDPSVTPETILPDLSDNSPSVTNDCTQSSTINVDSLGSNLFSVIKNPSNSSFKESIGKPGIVDNKLDAEFSDSCPVPDLTCNEKPSISPCSELSEHGDNSLDCTSPLPKPESSRSQSLANKMDNGKKSVTKTRNNLLRLNNIFVKKHKKILQIKNAKLYPPNFTSQAQEPRESSSSNKSPENFSINKIHSENADSKSSGSIHTISIEKIKAIEEHQNEFDANTEEQSMDIEPVTPSNVNHNNHYTTTVDMVHVKEEVNSSNDFSNEDRSSTDIAPMESLRPINVINYSNMGGDFDDESNHRELLELEAASKNKQFVSMMNENYFGDNIYADYFTPDRVEAFEAAKEDNYCKENSKDSMYIWGEPSQKESEFVLPNFIHESYKIAENGVDYSDITGDNQADAEVDRCERDSKADVLSDRSEGEAPLNICSDERMPPRGEISGQESNGDMESPWTGMYSGAPPAEPYDLMARESWVSDASDDDANEKTDNIAAGRRARSYGRLLAARAIKKEEKPDESVLAGNLLTLDSKESMTTTMLQVYDAMNETKPQIEGLIKSENRKRRRDYVCPTCKVDQITEAGFHAHLKIHPLECLTCGKCFFRRANLALHAKTHTGIKNFKCDVCEKRFLTRQKLTEHHNVHTGRAPVKCTLCDDTFRRYSNMVQHRDRHHYKKKAKVRDFVCSCGAVFHSRAKLRWHRETHDERPKACLYCSDKFVHAASLTRHVRRSHNDHYARAQRHNVPCPVCKQMYLRTNLRAHLLTHSGKRPYHCIICNKAFTTKWNLKLHRWTHLGRSAKPYKCTLCKGAFIRHTEYVSHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01034965;
90% Identity
iTF_00958913;
80% Identity
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