Mmes018306.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mechanitis messenoides
Gene Symbol
znf711
Assembly
GCA_959347415.1
Location
OY365769.1:11069832-11075544[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.0032 0.3 12.3 1.9 2 23 239 260 238 260 0.96
2 12 0.64 60 5.0 0.3 3 23 268 289 266 289 0.93
3 12 0.37 34 5.8 0.1 2 23 297 319 296 319 0.88
4 12 5.5e-05 0.0051 17.8 4.5 1 23 325 347 325 347 0.98
5 12 8.5e-08 7.9e-06 26.7 3.1 1 23 353 375 353 375 0.97
6 12 0.00014 0.013 16.6 0.8 1 21 381 401 381 402 0.96
7 12 0.13 12 7.2 1.6 3 19 424 440 423 445 0.92
8 12 1.7e-06 0.00016 22.6 1.7 1 23 748 770 748 770 0.98
9 12 2.9e-05 0.0027 18.7 2.1 1 23 777 800 777 800 0.94
10 12 0.0039 0.36 12.0 0.4 1 23 808 831 808 831 0.95
11 12 0.0015 0.14 13.3 2.5 1 23 837 861 837 861 0.97
12 12 0.0074 0.69 11.1 3.4 1 21 867 887 867 887 0.95

Sequence Information

Coding Sequence
AtggataaatttttatcttggACGGCGCAGGTAAAAGATACAAGCAAGCGCATTCACATGACAGTTCACTCCCTTAAGCGTTTGCAGAATTTTCTACCATTGTGGACTAAAATCTTGCTATCACAATCTCTTCTGTTACCCCTTCTTGACTATGCTGACGTTTGCTGTTTGGACGCATCTGAGGAGCTACTTAACAAACTAGATCGCCTTCAAAACTTGTGTATCCGTTTTATTTTTGGACTACGCAAGTTTGATCATATTTCTGATTTCCGTCGTCAACTTGAGTGGCTCCCTATTCGCCTTCGCCGGAATATGCACATCCTAACCACGCTATATAATCTCCTTTCTAATTTAGCCCCCCCTTATTTACTTGAACGTTTCCAATACTCATTATCCAGTAGCCGTCCAAAACGGACaaatatctacGCCCCTCTGCCTCCGCCTCTGACTCTGCCTCTGCCTCTGCCTCTGCCCCTGCCCCTGCCTCTGCCCCTGCCCCCACCCCCGCCTCCGCCTAGCAACAAGCAAGATAATTCTTTTGTGGATTCCGAGACGACAGATTtagtatttaagaaaaatcaaGAATGCGAGTATGATTTTACTAATGATCTTCCATCACATGGCTCGTTACTGGGGACAGACGACGTCCTTGCTCAATTCTTGTCTGCTGATGGACCTTTGGAGGAGCCCGACTTAAATGGGCCTACAACATTACACTGCGAGATATGTCAAAAGAAATTTGATAatgctaaaaaatattatggacATCTGAGAGTTCATTCCAAAGATAATCTTTGGATATGTGATAAGTGCCCAGATCAAAAGTTTGCCATTAAACAACAGTTAATGAAGCACAGCCTCACACACAAACCACTTTCCAGAGTTTGGAAGTGTCCACAATGCACAATGGCATTTGAAGCTCTCTGGCGTCTTCAGCAACACCTTTTTGCTAAACACTTGGATTATAGACCTCATAAATGTGAACAATGTGAAAAATCTTTCCATAAACCATCAGATTTAAGAAAACATGTGGATACTCATAAAGATGTCAAAGGGCATGTTTGTCCTAACTGCGGGAGAGGCTTCAGTCATAAATCAAACCTCAAGAGGCACATGCTACTACATGCAAAAGAGAAGCCGTTTAGTTGTACTGGCTGTCAGACCAGGTTCACACAGgtaGCATCTTTAAGACGACACCAGAAGAACTGTTCTCTCTTCATCTCAAGTTCTGCTTATCAACCAGGTCAAGACAAAACTAGAAAGAATTATTGCAGAGTTTGTGGAGCTACgtttcaatataaaagttcTTTGCTAGAACACTGTGTTAGaCAACATACTCCTCATAAAGAAGAGAAAGATAATAAGATCACACAATTAAATGATACAAACAGGACCGAAGATAACATTGTAGATGATATCCTGTCTGCAGAAGATGATTACTTGACCATGTCCAATCATCAAGATGGTTTATCACACTATAATAGTCAAGTGATGAATGATGTTACCtcatatgataatttaatgcAAATAGAATTCCTGAAAGAAATGAATCAGTTACATATACTAGATGATGAACTTTTATACAATGATCTCGATTTTGatagttttcaaaataacCAAATCTTTAATGTAAATCCAAATGAAATAGATTgtgtaaatgataaaaatagtgaagttttatttgattttacggAGACAACCAAGAGTGTGGATCAAGATATAATGAATGCACTATACCAAGTTAAGGCTGAGCTCTTGCCTGATGATTTGTTGAATGTAGACTCCATAAATACAGTGAAACGTCCTGAGGAAGAGACTCCAAAGGTGACGGTTAATGAATGTGCAACTATATTTGAAAGTGATGTTGATTTAGAGGCTAGTACTAATTTAGCAGCTAATTTGAATCAGTTGATTGGAGAAAATAGTGTTCAGTACATTTCTACTGAGGATGatgatatgtttattataagtcTCAATAGTGAGATTGATGCTGAGCAACTAACGGATATGCTGAATATTGGAGTTGGTGTTGTAAATACTAAAGTGGAGGaaaaacaaacagacattCAATTCAATGATgaagataaaagtaaaaatctcTTAGATAATATACAACCTGtcattttgaaaatagaaCAATCTAAAATAACTGAAGATCCTAGTGATTTAAAGGACCAGAtcaaaatagaagaaaaagaaaataaaccaaataataaGGTTAAAAGCAAAAAGCGTGTTCTCTTTGTTTGTTCCACATGTGATAAAGTGTTTAAGAAAAAGGATAACTTTAGGTCACATATAGGCACGCACGAGGCTTCTCTCCGTCGTCACGCATGCGGTGTGTGCGGGGAGCGCTTCAGCTACCGCTCCACGCTCAACAAGCACCGCCGCGACAAACACACACCGCATGTGCGTGAAACACACGCCTGCACGCGCTGCGAGCGGGCCTTCACCGCCGCGTGGATGttaaaaaatCACATAGAACGTGATCACGATCGACTGACACCATACGTTTGTGATGTTAAAGACTGTGGAAGAAAATTTTTCAAGAAATGTGATCTCGTTGTACATACGAGgtaCCACACTGGAGAGAGGCCATACTCCTGTGAAGTTTGCAAACAGAAATTCCTTCACAGTTCCCATCTCAAGCGACACGAGCGTTGTGTGGACTGTACGAAGCGGGCTAAAAGATAG
Protein Sequence
MDKFLSWTAQVKDTSKRIHMTVHSLKRLQNFLPLWTKILLSQSLLLPLLDYADVCCLDASEELLNKLDRLQNLCIRFIFGLRKFDHISDFRRQLEWLPIRLRRNMHILTTLYNLLSNLAPPYLLERFQYSLSSSRPKRTNIYAPLPPPLTLPLPLPLPLPLPLPLPPPPPPPSNKQDNSFVDSETTDLVFKKNQECEYDFTNDLPSHGSLLGTDDVLAQFLSADGPLEEPDLNGPTTLHCEICQKKFDNAKKYYGHLRVHSKDNLWICDKCPDQKFAIKQQLMKHSLTHKPLSRVWKCPQCTMAFEALWRLQQHLFAKHLDYRPHKCEQCEKSFHKPSDLRKHVDTHKDVKGHVCPNCGRGFSHKSNLKRHMLLHAKEKPFSCTGCQTRFTQVASLRRHQKNCSLFISSSAYQPGQDKTRKNYCRVCGATFQYKSSLLEHCVRQHTPHKEEKDNKITQLNDTNRTEDNIVDDILSAEDDYLTMSNHQDGLSHYNSQVMNDVTSYDNLMQIEFLKEMNQLHILDDELLYNDLDFDSFQNNQIFNVNPNEIDCVNDKNSEVLFDFTETTKSVDQDIMNALYQVKAELLPDDLLNVDSINTVKRPEEETPKVTVNECATIFESDVDLEASTNLAANLNQLIGENSVQYISTEDDDMFIISLNSEIDAEQLTDMLNIGVGVVNTKVEEKQTDIQFNDEDKSKNLLDNIQPVILKIEQSKITEDPSDLKDQIKIEEKENKPNNKVKSKKRVLFVCSTCDKVFKKKDNFRSHIGTHEASLRRHACGVCGERFSYRSTLNKHRRDKHTPHVRETHACTRCERAFTAAWMLKNHIERDHDRLTPYVCDVKDCGRKFFKKCDLVVHTRYHTGERPYSCEVCKQKFLHSSHLKRHERCVDCTKRAKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00461794;
90% Identity
iTF_01034875;
80% Identity
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