Basic Information

Insect: Mechanitis messenoides
Gene Symbol: -
Assembly: GCA_959347415.1
Location: OY365772.1:1302768-1304838[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.7e-06 0.00025 22.0 1.7 1 23 172 194 172 194 0.98

2 9 2.6e-08 2.4e-06 28.3 1.6 3 23 202 222 200 222 0.98

3 9 8.7e-05 0.0081 17.2 0.3 1 23 228 250 228 250 0.98

4 9 9.4e-06 0.00087 20.2 1.7 1 23 256 278 256 278 0.99

5 9 1.9e-05 0.0018 19.3 1.7 2 23 436 457 435 457 0.96

6 9 2.5e-09 2.3e-07 31.5 1.6 1 23 463 485 463 485 0.98

7 9 0.0021 0.2 12.8 0.6 3 23 493 513 491 513 0.97

8 9 5.4e-05 0.005 17.8 1.5 1 23 519 541 519 541 0.99

9 9 0.017 1.6 10.0 0.8 1 23 547 571 547 571 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.7e-06	0.00025	22.0	1.7	1	23	172	194	172	194	0.98
2	9	2.6e-08	2.4e-06	28.3	1.6	3	23	202	222	200	222	0.98
3	9	8.7e-05	0.0081	17.2	0.3	1	23	228	250	228	250	0.98
4	9	9.4e-06	0.00087	20.2	1.7	1	23	256	278	256	278	0.99
5	9	1.9e-05	0.0018	19.3	1.7	2	23	436	457	435	457	0.96
6	9	2.5e-09	2.3e-07	31.5	1.6	1	23	463	485	463	485	0.98
7	9	0.0021	0.2	12.8	0.6	3	23	493	513	491	513	0.97
8	9	5.4e-05	0.005	17.8	1.5	1	23	519	541	519	541	0.99
9	9	0.017	1.6	10.0	0.8	1	23	547	571	547	571	0.95

Sequence Information

Coding Sequence: ATGCAGCACCAGAGTCCAGGCGGACCTTCGCCGCAGCCTGAGCCGCAGCTTGCGTCTCCTGCTCCCTCACCTTATCCCCCCGCGCCGCCGCCTCCTGACCAGGCAGCGGATGAGGCCGCACAACAGCTTGCTCAGCAACAAGCGCAACAACAAGCGCAGCAGCAAGCACAACAACAAACGTCTCCAGACCACATGCAAGTTGAACAACAACTTCAGAATCAATCCCAGCCACAACAGCCATCGCAAGACCATCTAGACCGAACGCCGTGCTTTGTTACACAACCTGACTTACAACAACAATATACACCATACTTCAAAGAAACTAGACCGGCAAGCCACATGCTCGGAACTGGTGGTTTTCCATTACACTACCTAAAGCAAAATGGCGGTGTTCTATCATTAGAGGGCCCGCTAGATCAGTATGCAACTCCAGATTTGCGCCACCTACCAGACATTGTGCAACCTGAGCCACCTAAACCTCGGAAGCACAATCCAAATACTGAGCTTCGCCTGTTCAAATGCCTAACGTGCGGCAAAGACTTCAAGCAAAAATCAACCCTGCTCCAACACGAGCGGATCCACACAGACTCGAGACCATACGGGTGTCCAGAGTGCGGCAAGCGGTTTCGGCAGCAGTCACACCTGACGCAGCATCTTCGCATCCACGCCAACGAGAAACCGTACGCGTGCGTGTACTGTCCGCGCTCGTTCCGGCAGCGGGCCATCCTCAACCAGCACCTGCGCATCCATTCCGGTGAGAAGCCATATACGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAACCAGCACGTCCGCACACACCAAGGCGAGCGCTATTCACACATATATGCCCCGCCCCGGTCCTCGCACGCGCCGCCCGCACTGACTCGACCATTTCGCGTCAATGCCGGCGACGCCAGCGATCCCTACCGCCCTTCACCCGTTCGATTCGGTCTCGCATCCATTGGCCTTCCTATCAGACAAATTCTCGACGTTTCTCCGCATCTTATCTTCAAGAACGGGACAACGCCGACGTTGTGGCCTCAGGATGTACCATTTCCGCCGGATGAAAACAAGGAAGAGGTGCAGTCGACTTATGGAGATACCGATGGTCAAAACGGCGATCAGCGTGGCTCTTGTTTTTCGCCTGGAGATACCGCGCAGTACCCTGCATACTTTAAAGATACAAAAGGACTCAATCATGCCGTATTCGGATCCAGTCTCTCGCTGCAGTACCTTAAAGGAGGAAAACTGCCCGACGTATTAGGAGGACGCGCTATGCCACTATACGTCCGATGTCCCATTTGCCAAAAAGAATTTAAGCAAAAGTCGACACTTTTGCAGCACGGCTGCATACACATTGAGTCGCGACCGTACCCGTGCCCTGAATGCGGTAAACGTTTTAGACAGCAATCTCATTTAACCCAACATTTACGCATTCACACAAATGAAAAACCGTACGGTTGCGTCTACTGCCCACGATTCTTTCGGCAGCGGACGATCTTAAACCAGCATCTCCGCATACACACCGGCGAGAAGCCATACAAATGCACGCAATGCGGCAAAGATTTCAGGCAAAAGGCCATTCTGGACCAGCATACGCGGACTCATCAGGGCGATCGGCCATTCTGCTGCCCGATGCCGAACTGCAGGCGCCGTTTCGCCACAGAACCGGAAGTCAAAAAGCACATCGACAACCACATGAACCCTCATGCGGCGAAGGCCCGACGGGCCGACGCGAAGACACCGCGCCCGCTGCCGCCGGCCTCCGCGGTCGTGAAGCCGGAGCTGTACTTCCCTCAGTGCTACGCGCCGCCCTTCCAGCAGTTCCCGACGTCGAGCGCGCCGGAGTTCAAGCCGACGGTGGGCGGCGGCGTGGCGTGTCTCCCCGCGCAGTGA
Protein Sequence: MQHQSPGGPSPQPEPQLASPAPSPYPPAPPPPDQAADEAAQQLAQQQAQQQAQQQAQQQTSPDHMQVEQQLQNQSQPQQPSQDHLDRTPCFVTQPDLQQQYTPYFKETRPASHMLGTGGFPLHYLKQNGGVLSLEGPLDQYATPDLRHLPDIVQPEPPKPRKHNPNTELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQGERYSHIYAPPRSSHAPPALTRPFRVNAGDASDPYRPSPVRFGLASIGLPIRQILDVSPHLIFKNGTTPTLWPQDVPFPPDENKEEVQSTYGDTDGQNGDQRGSCFSPGDTAQYPAYFKDTKGLNHAVFGSSLSLQYLKGGKLPDVLGGRAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKARRADAKTPRPLPPASAVVKPELYFPQCYAPPFQQFPTSSAPEFKPTVGGGVACLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00358842;
90% Identity: iTF_00419170;
80% Identity: -