Basic Information

Insect: Mechanitis messenoides
Gene Symbol: -
Assembly: GCA_959347415.1
Location: OY365760.1:13503465-13516017[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 7.1e-05 0.0066 17.5 2.2 1 23 408 430 408 430 0.97

2 20 0.008 0.74 11.0 1.9 1 20 436 455 436 458 0.93

3 20 2e-05 0.0018 19.2 5.4 1 23 477 499 477 499 0.98

4 20 0.00017 0.015 16.3 4.7 1 23 505 527 505 527 0.99

5 20 3.1e-05 0.0029 18.6 5.3 1 23 533 555 533 555 0.97

6 20 1e-05 0.00094 20.1 7.3 1 23 561 583 561 583 0.97

7 20 6.4e-07 5.9e-05 23.9 2.9 1 23 589 611 589 611 0.97

8 20 9e-05 0.0084 17.2 6.7 1 23 617 639 617 639 0.97

9 20 4e-05 0.0037 18.3 5.4 1 23 645 667 645 667 0.98

10 20 4.3e-07 4e-05 24.4 1.9 1 23 673 695 673 695 0.98

11 20 4.4e-05 0.0041 18.1 7.9 1 23 701 723 701 723 0.98

12 20 5.1e-05 0.0047 17.9 5.6 1 23 729 751 729 751 0.97

13 20 6.7e-06 0.00062 20.7 4.3 1 23 757 779 757 779 0.98

14 20 1.7e-05 0.0016 19.4 6.4 1 23 785 807 785 807 0.97

15 20 4.5e-05 0.0042 18.1 6.1 1 23 813 835 813 835 0.97

16 20 2.2e-05 0.002 19.1 6.1 1 23 841 863 841 863 0.98

17 20 5e-05 0.0047 18.0 7.8 1 23 869 891 869 891 0.97

18 20 3.9e-06 0.00036 21.5 4.1 1 23 897 919 897 919 0.96

19 20 0.00065 0.06 14.5 0.3 1 23 926 948 926 948 0.96

20 20 0.013 1.2 10.4 5.5 1 23 958 980 958 980 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	7.1e-05	0.0066	17.5	2.2	1	23	408	430	408	430	0.97
2	20	0.008	0.74	11.0	1.9	1	20	436	455	436	458	0.93
3	20	2e-05	0.0018	19.2	5.4	1	23	477	499	477	499	0.98
4	20	0.00017	0.015	16.3	4.7	1	23	505	527	505	527	0.99
5	20	3.1e-05	0.0029	18.6	5.3	1	23	533	555	533	555	0.97
6	20	1e-05	0.00094	20.1	7.3	1	23	561	583	561	583	0.97
7	20	6.4e-07	5.9e-05	23.9	2.9	1	23	589	611	589	611	0.97
8	20	9e-05	0.0084	17.2	6.7	1	23	617	639	617	639	0.97
9	20	4e-05	0.0037	18.3	5.4	1	23	645	667	645	667	0.98
10	20	4.3e-07	4e-05	24.4	1.9	1	23	673	695	673	695	0.98
11	20	4.4e-05	0.0041	18.1	7.9	1	23	701	723	701	723	0.98
12	20	5.1e-05	0.0047	17.9	5.6	1	23	729	751	729	751	0.97
13	20	6.7e-06	0.00062	20.7	4.3	1	23	757	779	757	779	0.98
14	20	1.7e-05	0.0016	19.4	6.4	1	23	785	807	785	807	0.97
15	20	4.5e-05	0.0042	18.1	6.1	1	23	813	835	813	835	0.97
16	20	2.2e-05	0.002	19.1	6.1	1	23	841	863	841	863	0.98
17	20	5e-05	0.0047	18.0	7.8	1	23	869	891	869	891	0.97
18	20	3.9e-06	0.00036	21.5	4.1	1	23	897	919	897	919	0.96
19	20	0.00065	0.06	14.5	0.3	1	23	926	948	926	948	0.96
20	20	0.013	1.2	10.4	5.5	1	23	958	980	958	980	0.99

Sequence Information

Coding Sequence: ATGAATTCGGATCTTCATAATATCAATACGGGTGGTGGCCAGCCACCAGGCAATTCTGAGTCTCAGACTCAAAGAGTTCAATCATCGCAGCAGCAACCGCAAGCACAATCTAACAATTTAACACCTACAACATCTGCTACAGACTTACGAGTTAATTCAGCGGCTGTAAACGTTGCTTTGTCAAGCGTGGCCAAGTATTGGGTGTTTACCAATTTGTTTCCGGGTCCATTGCCACAGGTTTCTGTGTATGGCGTGCCTACTGGTACAAGAATAGAAAATGGAAAACCAGTACAGgcTTTTCAGGATCTTGGTCAAGCCCATGCTAGTATTCTGAATGGAGACCCAAGTATTATTCTAGGCCATGCAGGACAACCTCAGGTCACTGTATCGGCTGCTGGCCAACAGATTCCTGTCTCACAGATTATTGCTACGCAATCTGCTCAAGGACATGTTCCAGAGTCGCTGGTGGGTCACGGTTCTGGCGAGGCAGGCGGGTCACTAGCGGCTTCCTCGCAGGTACCCAATCGGGTCGAGTTTTTACAACATAACATTGACATGGGTCACCACTCACAGCAGCACCTCATGCAGCAACAACTGATGTCGCGCCCTGACCACGCCAATCAACAGATCCAGCTAACAGTAAGTGAAGATGGAATAGTAACAGTGGTAGAGCCAGGCGGAGGCAAGCTGGTCGATAAGGAGGAACTACATGAGACTATCAAGATGCCAACTGACCACACTCTCACTGTGCATCAGTTGCAACAAATCGTTGGCCATCATCAGGTCATAGACAGCGTGGTGCGCATCGAGCAGGCGACGGGCGAGCCGGCCAACATCTTGGTGACGCAGAACCCGGACGGCACCACCTCCATCGAGACCAGCGCGGCCGACCCGCTCGCAGTCATCAAGGACGAGAAGAACGCCAAGATGGAGCCAGCTCAGTTCGCGATACCGGCGGAGATCAAGGATATAAAGGGGATCGATTTAAAGAGTGCAATGGGTATGGAAGGTGCGGTCGTAAAGATATCAACCGGCACAGAACACGACTTACATGCAATGTACAAAGTCAATGTAGAGGATTTATCGCAATTACTGGCTTATCATGAAGTGTTTGGGAAATTAAATACTGAAGGACAGCCCCAAGCTAAGGTGATAAGTGAAGTGGAGGTGGAAGCAGGAACAAGTGCGGCGATGTCTGAAGCGGAGTCTTCGCCCGGTCATCACTCTTGTGATATATGCggcaaaatatttcaatttagatATCAACTTATTGTGCACAGGCGTTACCACGGCGAGAGCAAACCACATACATGCCAAGTTTGTGGATCTTCCTTTGCGAATCCTGTTGAGCTGTCCAAGCATGGGAAATGTCACCTTGCTGGAGACCCTGCAGAGCGACAAGCAAAGCGGCTCGCCCAGGACAAGCCGTACGCCTGCTCCACTTGCCACAAGACCTTTTCGCGAAAGGAGCACCTCGACAACCATGTACGCAGTCACACTGGGGAAACTCCGTATAGATGTCAGTTCTGCGCTAAGACGTTCACCCGCAAGGAGCACATGGTGAACCACGTGCGCAAACACACGGGCGAGACGCCGCATCGCTGCGAGATTTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACTGGTGAAACACCGCATCATTGTCAAATTTGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGATCCCATACGAACGATACCCCCTTCAGATGCGAACTCTGCGGCAAATCATTCACCAGAAAGGAACACTTCACCAATCATATACTGTGGCACactgGAGAAACCCCGCACCGTTGCGATTTCTGCTCCAAAACCTTCACTCGCAAGGAGCACCTTCTAAACCACGTGCGTCAACATACGGGCGAGTCTCCGCACCGCTGCAACTACTGCGCCAAGTCCTTCACCCGCAGGGAGCATCTCGTCAATCACGTGCGACAACACACGGGCGAGACGCCGTTCCAGTGCGGATACTGTCCTAAGGCGTTCACCAGGAAGGATCATCTTGTGAACCACGTCCGGCAACATACAGGAGAATCGCCACATAAATGTTCATTCTGCACTAAGTCGTTCACTCGCAAGGAGCATTTAACCAACCATGTAAGGCAACACACCGGCGAATCACCACATCGCTGTGTCTATTGCGCGAAGTCCTTCACTAGAAAGGAACATCTCACTAATCACGTTAGACAGCATACGGGCGAGACTCCTCACAAGTGCACGTACTGTCCGCGCGCGTTTGCGAGGAAGGAACACCTCAACCAGCACGTGAGGCAGCACGTGGGCGACTCGCCGCACACCTGCTCCTACTGCCAGAAGACCTTCTCCAGGAAAGAGCATCTCGTTACACACGTTCGacaACACACAGGGGAGACTCCATTTAAGTGCACGTATTGCGCCAAGTCTTTCAGTCGAAAAGAACATCTCACCAACCACGTTCATCTCCACACAGGCGAGACGCCACATAAGTGCGCATTCTGCACGAAGACGTTCTCTAGGAAAGAACACTTGACTAACCATGTTAGaatcCACACAGGTGAATCCCCACATCGTTGTGAGTTTTGTCAAAAGACGTTCACTCGTAAGGAGCATTTGACAAACCACCTTAAGCAACATACTGGTGATACGCCTCACGCTTGCAAGGTGTGCTCCAAACCATTCACGAGAAAAGAACATCTTGTTACTCATATGagGTCACACAGTTGCGGCGAGCGACCTTTTAGTTGCGGCGAATGTGGAAAATCTTTTCCCTTAAAGGGTAACCTATTATTCCACGAGCGATCTCACAATAAGAGCAACGCCGCCAACAAACCCTTCCGATGTGAAATATGCTCTAAGGAGTTTATGTGTAAAGGGCATCTAGTAACACACCGGCGAACTCACAATGCTAATGAAGCAGCAACGACCGAGCCCGCACCAGAAGGAGAAGATTGTGGAGATTACAAGTGCGACAAGGAAGCTGATAGACCCGAACGAAAACATGATATTAGaaCATCAGTTGATAATAGAGCTACAGAAACTTCAGTGACAGTAAATCAGCAAACTAATACAACGGTTATGCAAATTACTAGTCAAGAAGTCCGAGCTGGAACAGCGACGAGCACGCAATCCGTTGCCGGTACATTCACGCATACAAGCACCCACCACTCCGGCACGATAGCACAACATCCCGTCACTGTGAATTACTAG
Protein Sequence: MNSDLHNINTGGGQPPGNSESQTQRVQSSQQQPQAQSNNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPLPQVSVYGVPTGTRIENGKPVQAFQDLGQAHASILNGDPSIILGHAGQPQVTVSAAGQQIPVSQIIATQSAQGHVPESLVGHGSGEAGGSLAASSQVPNRVEFLQHNIDMGHHSQQHLMQQQLMSRPDHANQQIQLTVSEDGIVTVVEPGGGKLVDKEELHETIKMPTDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAADPLAVIKDEKNAKMEPAQFAIPAEIKDIKGIDLKSAMGMEGAVVKISTGTEHDLHAMYKVNVEDLSQLLAYHEVFGKLNTEGQPQAKVISEVEVEAGTSAAMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPHTCQVCGSSFANPVELSKHGKCHLAGDPAERQAKRLAQDKPYACSTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCVYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFARKEHLNQHVRQHVGDSPHTCSYCQKTFSRKEHLVTHVRQHTGETPFKCTYCAKSFSRKEHLTNHVHLHTGETPHKCAFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLKQHTGDTPHACKVCSKPFTRKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKSNAANKPFRCEICSKEFMCKGHLVTHRRTHNANEAATTEPAPEGEDCGDYKCDKEADRPERKHDIRTSVDNRATETSVTVNQQTNTTVMQITSQEVRAGTATSTQSVAGTFTHTSTHHSGTIAQHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00247403;
90% Identity: iTF_00959562;
80% Identity: iTF_00960323;