Basic Information

Gene Symbol
osa
Assembly
GCA_959347415.1
Location
OY365765.1:14966980-14979427[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.6e-25 6.7e-22 78.3 0.0 2 89 270 354 269 354 0.94

Sequence Information

Coding Sequence
ATGATCACGTCGTGTCCGACTGTATCGAGGCGGGAAAGTAAAGACCTCGGCGCGGCGACTGCTGCTGCCCTTGGTACAGCTGGTTgcACCCAGAACTTACCGATGCCACCGCGGCCGTCGTCGTCCCTATCGGACGGCAGCGGGCCGACCGTGCGAGCAGGCACCGGCCCTCCAGCTGCAGGACCACCACCCTCGGGCGCTCCGCCCCCCGGCGCTATGCTCCCGCAGCCCTACCCGCATCACGGGCCTTACAAATCGGCGCCCTACCCGCCGCAGCCCTACGGCTATCCGCCGCGCAATCACCATCCCTATCCGTACGGAGGATACAGGCCGACGCCGCCTCCGCATCCCTCTCAACACTACCCGCCCTTAAAGCAGGCCGGACGTCACATGGGTCCGCCGCCGGGCGCGGGCGATGCCATGCCGCCGCCCACAGCGCCGGGCGAGCCGCACGACAACGGGCCCGCCGCGCCCGCCACCGCGCTCGTCACCACCGGGCCCGACGGTGCGCCGCTGGACGAGGGCAGCCAGCAGAGCACGCTCAGCAATGCCTCCGCAGCGTCAGGCGAGGAGGCGTGCGGCACGCCCAAGAGCCGCAAGGAGTACGGCGCGGGCAGCGCGGCGCCGTCGCCGTCCCCCGGCGGCGCCTCGCACTCCTCCGTGCACGACGACTACGACGCCTCCGCCTCGCCCTGGCCGCGCCCGCCGTCTAGTCCCGTATTTAACAGTCACATAGCGCCGGAGTCCTACAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCGCCCGAGCGCCGCGGCTGGGTGGAGCGCCTGCTGGCCTTCATGGACGAGAGGCGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTGGACCTGTACCGCCTGTACCTGCTGGTGCGCGACCGCGGGGGGTTCGTCGAGGTGACGAAAAACAAAACGTGGAAAGACATAGCGGGGTTGCTGGGTATTGGCGCATCATCTTCGGCCGCGTACACGCTTCGCAAACACTACACCAAGAACCTACTGGCGTACGAGTGCCATTTCGACCGCGGCGGTATCGACCCTCAGCCCATCATCAGTCAAGTGGAAGCCTCCACCAAGAAAAAGAGCGGAAAAGCCAACAGTACGTCTAGTGCAGGCTCGTCCAACTCGTCGGAGCAGTTCcccgcggcggcggcgggcgcgcTGGACGGCTACCCGGCGCACGGCGCGCACCCCGCGCACTACGCGCCCTACCCGCCGCAGCCCGCGCAGCCGCAGGGCGGCGGGCCGGGCGGCGACAACCTCGCCGCCTCCAACCCGTTCGACGAGCCGCCGGGGCCCAGGCGACCCCCAGGTTATCAACAAGGTTACGGGTACGAATATGGATCTCCTTATCCATCGAACAGGCCCGTCTATCCGCCCTACGGCCCCGAAGGGGACAgGGGCTACGGAGGTAGTGGCGAGTACCGCTACGGGTACGGCGGGTACCGGGCGGGAGCGCCCGCGCCCGGCGCGCCGCCCGCGCAGCCCGCGCCCGCGCACCCCGCGCCGGCGCAGCCCGCGCAGCCCTACCCCGACTACTACCGCGCGCCGCACCCACACGCGCACCCGCACCCTCACCCGCACCCGCCGCACTCGCCGCAGCAGCACGACCTGGCGGCGGGCGCCGGGCTGCTGAGCTCGCAGCTCGCGCGGCAGCTCGTGGCGCCGCTGCCGTCGCCGCGGAGCGCCTACGTACGGACGTTTGTACCACGCACTCAACACCGCTTCCCATATTGGCGACCGGGAGGCGGCGGCGCGGCAGGCGGCGTAGCGGGTGCTCCCCGGCGGCACCCCGACTTCGCCAAGCAGGAGGCGTACGCGGGCGCGGGCCCGGGCGGCGCGGCGCGGTTCGCGGGCGGCGCGTGGGCGGGCGGCTTCCCGAGAGGAGCGCCCGCGCCCGCCTGGCgcccgcccgcgccgccgccgcacgCGCACCACCCGCACCAGCCCGCCTGGCCCCACCACCAGCCGCACCAGCCGCATCAGCCCTACCACCCGCCGACGCCGGGCGGCGCGGCGTGGGGCGCCCCGCGGCCGCCGCAGGAACTGCCGCCCGCCGCGCCTTCGCCTGGTGCAGCGGGCGTAGGACAATTGAAAAGAGAACTGACCTTCCCCGCGGAGTGTATAGAGGCGACCATGCCCGCTGCGGAGAAGCGGCGCCGACTGACCAAAGCCGACGTGGCGCCCGTCGACGCGTGGCGTATCATGATGGCGCTCAAGTCCGGCCTGCTGGCAGAAACATGCTGGGCACTGGACATCCTGAATATACTTTTGTTCGACGACAATTGCATAGGCTATTTCGGCCTCCAGCATATGCCCGGCCTACTCGATCTTTTACTGGAGCACTTCCATAAGAGTCTGGGTGATGTGTTCGATGCGCCCGCGACGGAAAGCGAGCCGTGGTACGCGCCGCCCAGCAGCCCCGAACCGGTGGCGCGCGCCCGACGGAGGGCGGAGCCCCCAGACCCCACAGATCGAGTCCGAATACTCACCTGCGAGAATTACACTTTACAATCGCGCCGCCGCCTACCGGTTACGATGGTCGTTAAAGCCGATCGCGCCGACGAAGACCTGTTCGCACCCGAGGAAGCGGAGATCGACCGCGACGTGGACGACGTAACGGAGCCCTGGCAGCTCGGAGGAGAGTCGGCCGGCGCACACGTTATGCCCTGCTTTCGCGGCGAGTTCGTGCATTTGCCTTTCGTCCGCGTGTTACCAGGCGAGCGGCCGCCCTCGCCGCCCGCaccgcccgcgccgcccgtCTCGCCGAGAGATGCGCCGGCGCCTGTGCCGACGCCGGAGCCCTCGCCCGCCACCACGCCGGCGCCCGCCGACGCCGACAACCTGGAGGCGGAACCGATGGAGCTGGAACCCGAGAGGCGGCCTTCCTTGCACGTGCGCGATCCCGCCGGCGTATTGAAGCGTCGTCGATTAGAGGACTACGAGGACGAGTGCTACACGCGCGACGAACCGAGCCTCAACTTAGTAAACGAATCTCGCGACGCGCTCGCGAGACGATGTATCGCATTATCGAATATTCTTCGAGGCCTCACTTTCGTGCCCGGCAACGAAGCCGAATTTTCGAGATCCGGTGCATTCCTCGCCCTCGCCGGTAAATTGCTGCTACTGCATCACGAACACGCTCCCCGGGCGGCGCGCGCGCGAGCCTATGAGCGGGCCGCCAGGGACGAGGTCGACGCCGACTCGTGCTGCTCGAGCCTGCGAGGCGAGGGAGAGTGGTGGTGGGACACCCTGGCGCAGCTGCGGGAGGACGCACTCGTGTGCTGCGCCAATATCGCGGGCAGCGTGGAGCTGGGTGGGCAGCCCGAGGCTGTGGCGCGGCCGCTGCTGGACGGACTGCTGCACTGGAGCGTGTGCCCCGCGGCCGTGGCGGGCGACGCGCCGCCGGCCGCCTCGCCCGGCTCGCCGCTGTCGCCGCGGCGGCTGGCGCTGGAGGCGCTGTGCAAGCTGTGCGTGACGGACGCCAACGTGGACCTGGTGCTGGCAACGCCGCCGCGCGGGCGCATCGCGGCGCTGTGCGCGGGGCTGGCTCGCGACCTGTGCCGGCCGGAACGGCCCGTGGTGCGCGAGTTCGCTGTCAACCTGCTGCACTACTTGgcgggcgcgggcggcgcggcggcgcgTGAAGTCGCACTCCATGCCCCGGCCGTGGCGCAGCTCGTGGCCTTCATCGAGCGCGCGGAGCAGACGGCGCTGGGCGTGGCCAACCAGCACGGCGTGGCGGCGCTGCGCGACAACCCTGACGCCATGGGCACGTCGCTGGACATGCTGCGGCGCGCGGCCGCCACGCTGCTGCGCCTGGCCGAGCACCCCGAGAACCGCCCGCTCATCCGCCGCCACGAGCGCCGCCTGCTGTCGCTCGTCATGAGCCAGATCCTGGACCAGAAGGTGGCGCACGAGCTGGCAGACGTGCTGTTCCAGTGCAGCCGGCAGCGCGACGAGTGA
Protein Sequence
MITSCPTVSRRESKDLGAATAAALGTAGCTQNLPMPPRPSSSLSDGSGPTVRAGTGPPAAGPPPSGAPPPGAMLPQPYPHHGPYKSAPYPPQPYGYPPRNHHPYPYGGYRPTPPPHPSQHYPPLKQAGRHMGPPPGAGDAMPPPTAPGEPHDNGPAAPATALVTTGPDGAPLDEGSQQSTLSNASAASGEEACGTPKSRKEYGAGSAAPSPSPGGASHSSVHDDYDASASPWPRPPSSPVFNSHIAPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAFMDERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIISQVEASTKKKSGKANSTSSAGSSNSSEQFPAAAAGALDGYPAHGAHPAHYAPYPPQPAQPQGGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGSPYPSNRPVYPPYGPEGDRGYGGSGEYRYGYGGYRAGAPAPGAPPAQPAPAHPAPAQPAQPYPDYYRAPHPHAHPHPHPHPPHSPQQHDLAAGAGLLSSQLARQLVAPLPSPRSAYVRTFVPRTQHRFPYWRPGGGGAAGGVAGAPRRHPDFAKQEAYAGAGPGGAARFAGGAWAGGFPRGAPAPAWRPPAPPPHAHHPHQPAWPHHQPHQPHQPYHPPTPGGAAWGAPRPPQELPPAAPSPGAAGVGQLKRELTFPAECIEATMPAAEKRRRLTKADVAPVDAWRIMMALKSGLLAETCWALDILNILLFDDNCIGYFGLQHMPGLLDLLLEHFHKSLGDVFDAPATESEPWYAPPSSPEPVARARRRAEPPDPTDRVRILTCENYTLQSRRRLPVTMVVKADRADEDLFAPEEAEIDRDVDDVTEPWQLGGESAGAHVMPCFRGEFVHLPFVRVLPGERPPSPPAPPAPPVSPRDAPAPVPTPEPSPATTPAPADADNLEAEPMELEPERRPSLHVRDPAGVLKRRRLEDYEDECYTRDEPSLNLVNESRDALARRCIALSNILRGLTFVPGNEAEFSRSGAFLALAGKLLLLHHEHAPRAARARAYERAARDEVDADSCCSSLRGEGEWWWDTLAQLREDALVCCANIAGSVELGGQPEAVARPLLDGLLHWSVCPAAVAGDAPPAASPGSPLSPRRLALEALCKLCVTDANVDLVLATPPRGRIAALCAGLARDLCRPERPVVREFAVNLLHYLAGAGGAAAREVALHAPAVAQLVAFIERAEQTALGVANQHGVAALRDNPDAMGTSLDMLRRAAATLLRLAEHPENRPLIRRHERRLLSLVMSQILDQKVAHELADVLFQCSRQRDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00621002;
90% Identity
-
80% Identity
-