Basic Information

Insect: Mechanitis mazaeus
Gene Symbol: -
Assembly: GCA_959347395.1
Location: OY365744.1:5816409-5823174[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.01 0.88 10.7 3.5 1 20 219 238 219 241 0.96

2 11 1 92 4.4 3.4 1 23 275 297 275 297 0.93

3 11 0.00053 0.047 14.7 1.0 1 23 302 325 302 325 0.96

4 11 0.0045 0.4 11.8 0.4 2 23 330 352 330 352 0.96

5 11 0.078 6.9 7.9 0.1 2 21 359 378 359 379 0.93

6 11 4.8e-05 0.0043 18.0 0.3 3 23 391 411 390 411 0.97

7 11 0.00065 0.058 14.4 0.4 2 23 417 439 416 439 0.96

8 11 5.4e-05 0.0048 17.9 3.3 1 23 459 481 459 481 0.97

9 11 0.00015 0.013 16.5 2.8 1 23 487 509 487 509 0.98

10 11 2.4e-05 0.0021 19.0 1.8 1 23 515 537 515 537 0.94

11 11 8.9e-07 7.8e-05 23.5 1.7 1 23 543 566 543 566 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.01	0.88	10.7	3.5	1	20	219	238	219	241	0.96
2	11	1	92	4.4	3.4	1	23	275	297	275	297	0.93
3	11	0.00053	0.047	14.7	1.0	1	23	302	325	302	325	0.96
4	11	0.0045	0.4	11.8	0.4	2	23	330	352	330	352	0.96
5	11	0.078	6.9	7.9	0.1	2	21	359	378	359	379	0.93
6	11	4.8e-05	0.0043	18.0	0.3	3	23	391	411	390	411	0.97
7	11	0.00065	0.058	14.4	0.4	2	23	417	439	416	439	0.96
8	11	5.4e-05	0.0048	17.9	3.3	1	23	459	481	459	481	0.97
9	11	0.00015	0.013	16.5	2.8	1	23	487	509	487	509	0.98
10	11	2.4e-05	0.0021	19.0	1.8	1	23	515	537	515	537	0.94
11	11	8.9e-07	7.8e-05	23.5	1.7	1	23	543	566	543	566	0.97

Sequence Information

Coding Sequence: ATGAGTGATATATTAGCGTGTCGTGTGTGTTTAGCGACGGATGATGTGAAGCTTTATAACTTGAATACCTTGAATTTGGTGCATTCTTATGAGATATTAACTGGATTACagatACTCCTTGAAGACAAACTCCCCCAGCACATTTGTACCTTCTGCAGCGCACTACTTATAAAATCAGTTGcctttaaagaaaaatgctGCAATTCAcaagaaatattgaaattcacTGCGGGACAACAAGGACGActgACTTTGAACGCTATCCGCGCCATCAACCAGCCTCACCGTCATCCGTACAGCACGGCACGGGAACACAGCACGATCACTATAGATACAACCATCATAAAACAAGAGATAAAGGAAGAAGAGGAGAGAGtacaaaagaaaagtaaaagaaaaaagaaaatagagaAGGTGGTAGTAAAAGTGGAAGACGAGGTCAATCACGACCACGATTACGTTAATTATGAGAGTGATTCAGAAATGGAACCCGTTTTGGACATACGGGGATTAGAACTACAGAACATCGAAATACCGGATGCACAGATACAGGATAGAGAGTTGAAGGACGTCGAAATTGTGATTCTGACGAAAGCGGAACAGAAACAAGAGATCGAGAAGAGGAAGACATCTTCTAACTATCTGAATTCGTACTACAAGTGTGACCAGTGCTACAAAGGGTTCATCACGGAACCGACCTTCAGGAACCATATGACATGTCATGATCCGGAGCGCGGCCCCCACTCGTGCGACGTGTGTCGCTCGCACTGGTCGTGTGCGCGTGCACTGCGTGCTCACGCGCTCAACACGCACGAGAGGAAGTACATGTGCAAGGTGTGCGATCATGTATCGCGCTCCAGtCACCGCGCTAAGGAGCACAGCAAGTGGCACAGCGGTTTCTCCTTTATCTGCAAGACTTGTGGTGCTTCGTTTGCCAAGTCTACCAGCTACCTCACTCATACGCGGCTGCAGCATCCCTCCAGCAACTCGTGCGAGCTCTGTGGAGAGTCTTTCGTGGGGGAGTTTGGATTGAGGATGCACAAGAAAAAGACTCACTATCCTCTCGGGCCGGCTCAGTGTGATCAGTGCGACGTCAAGTTCTTGTCCCGCGACGCGCTCGTGAGGCATCTGGAGAGAGCTGGAGACAAGAGTTGCCACGGCGTGAGGCCTTGCACACACTGCGGGGAAGCATTCGACTCCGAAGACAGTCTCCGAGATCATGTCACGACACACGAGAAGGATGACGTGAGCTGTGAGGAGTGTAAGCTGACATTCTCGTCGGCTCGTTCGTACGCGACACATTACCAGCGAGTACACCTCGGACTCAAGCTCAAACAGCACAAGCCCAGGAGTTACAAGAAGCCCGTCGACAGCCACGTCTGTGAGATGTGCGGGAAGAAGTGCATCACGAAGGCTACGCTCATGTACCACCAGCGGATACACACCGGAGAGAGACCCTTCCACTGCACTGAGTGCCCCAAGAAGTTTAGCGTCTATCAGCGACTACAgATACACCAGCGCATCCACACGGGCGAGACTCCCTACCAGTGTAAGAGCTGTCCCAAAGCTTTTAAACACAAGGCGGCTCTCAACAGACACGACAGGGTGCATACGGGGGCTAAGCCCTATAGTTGTCCACACTGCGGTAAATCGTTTTCTCAGTCTAACTCCATGAAGCTGCACGTGAGCACGGTTCACCTCAAGCTGCCGGCTCCCTACCGCGCAcgcagaaataaaatataa
Protein Sequence: MSDILACRVCLATDDVKLYNLNTLNLVHSYEILTGLQILLEDKLPQHICTFCSALLIKSVAFKEKCCNSQEILKFTAGQQGRLTLNAIRAINQPHRHPYSTAREHSTITIDTTIIKQEIKEEEERVQKKSKRKKKIEKVVVKVEDEVNHDHDYVNYESDSEMEPVLDIRGLELQNIEIPDAQIQDRELKDVEIVILTKAEQKQEIEKRKTSSNYLNSYYKCDQCYKGFITEPTFRNHMTCHDPERGPHSCDVCRSHWSCARALRAHALNTHERKYMCKVCDHVSRSSHRAKEHSKWHSGFSFICKTCGASFAKSTSYLTHTRLQHPSSNSCELCGESFVGEFGLRMHKKKTHYPLGPAQCDQCDVKFLSRDALVRHLERAGDKSCHGVRPCTHCGEAFDSEDSLRDHVTTHEKDDVSCEECKLTFSSARSYATHYQRVHLGLKLKQHKPRSYKKPVDSHVCEMCGKKCITKATLMYHQRIHTGERPFHCTECPKKFSVYQRLQIHQRIHTGETPYQCKSCPKAFKHKAALNRHDRVHTGAKPYSCPHCGKSFSQSNSMKLHVSTVHLKLPAPYRARRNKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00461805;
90% Identity: iTF_00461805;
80% Identity: -