Basic Information

Insect: Mechanitis mazaeus
Gene Symbol: -
Assembly: GCA_959347395.1
Location: OY365743.1:22487096-22493087[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00037 0.033 15.2 0.2 2 23 135 156 134 156 0.93

2 10 0.00051 0.045 14.8 3.3 1 23 162 184 162 184 0.97

3 10 6.2e-05 0.0055 17.7 0.3 1 23 287 309 287 309 0.98

4 10 0.00093 0.082 14.0 0.0 3 23 393 414 391 414 0.90

5 10 0.00097 0.086 13.9 0.5 1 23 430 452 430 452 0.96

6 10 2.9e-05 0.0026 18.7 0.2 1 23 478 500 478 500 0.98

7 10 0.00058 0.051 14.6 0.2 1 23 506 528 506 528 0.97

8 10 0.00033 0.029 15.4 0.3 1 23 534 556 534 557 0.95

9 10 0.0078 0.69 11.1 0.6 1 23 570 592 570 592 0.96

10 10 0.0077 0.68 11.1 0.1 1 20 748 767 748 770 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00037	0.033	15.2	0.2	2	23	135	156	134	156	0.93
2	10	0.00051	0.045	14.8	3.3	1	23	162	184	162	184	0.97
3	10	6.2e-05	0.0055	17.7	0.3	1	23	287	309	287	309	0.98
4	10	0.00093	0.082	14.0	0.0	3	23	393	414	391	414	0.90
5	10	0.00097	0.086	13.9	0.5	1	23	430	452	430	452	0.96
6	10	2.9e-05	0.0026	18.7	0.2	1	23	478	500	478	500	0.98
7	10	0.00058	0.051	14.6	0.2	1	23	506	528	506	528	0.97
8	10	0.00033	0.029	15.4	0.3	1	23	534	556	534	557	0.95
9	10	0.0078	0.69	11.1	0.6	1	23	570	592	570	592	0.96
10	10	0.0077	0.68	11.1	0.1	1	20	748	767	748	770	0.93

Sequence Information

Coding Sequence: ATGGAGGAGGAAGAATTTAGTTTGCAGTGGGAAGATGAtaagCAAAACATAGTAACAACTGAAGAAGTAATATGTGGCTTGGATAGTGTGCAAAATGAATCCTTTGAAAATATGACGGAAGAAATTATTGCTGATACAGATCAAATGGCGGCTGAAAACTTAATGTATTTGTCACAGGATGTAGTTAGCTACACTGATAGTGCAGATTTAGCGGTAGATCCAAATGTTGAGTGTGTAACTGAAGAAGTTATCACTGATGATTGGGTTATTACGGGGGGACAAGAAAGagtGGAAGTGCCTTTAGAACATTTAGCAAATACTGATCAAAATGTGAAAATTGAAAACGACATTGATGTTCCACTACCAACTGACCAGGATGAATATACAGCCATGAGGCCATGGCCCTGTGACTTCTGTTCTCGTCGGTTCCGTAAGAAGGCAGCATTGATGAATCACATGGTGGCACATCAGAACGACAGACCACACTCATGCAACCTGTGTGGTGTGAGGTATGTGAGGAAGTGTGACCTCATGAACCATCTCAAAGTACACGCTTTTGTACCTGATAACACAGAAACTATGGACTTTGATGATGTTATAAGTTCTAATccagttattaaaacaaagaaaaaacgaGGTCGCAGAAAAAAGAAACCTGAACCTGTTGAgaaCGGTGTTTGGGAGAACATGACGTCGGCACGTACGCAGCAGTGGTCCCGCCGAGTCCGCTCGCCTCAGGCCCCCGCACCCCCTCCTCCGGCGCCTCTCTCGCCTCCCACACCCTCCCCTCAGTCCGTGCCTTCACCTCCGCCCTCCCCCTCCCCGCCCACTCCTCCACCCGCGGATCCGTCGCGCCCCTTCGTATGCAGGCACTGTGGAGTAGGATTTGCCAGAGAGAAGGCGCTGCAATCGCATGCGAGGGTGCACGGAGGTGACTCGCCCGTGGAGTGTGTGTCGTGTGGTGAGCTGTGCTGGTCGCGCGAGGCGCTGCGCGCGCACGCGGCGGCGCGGCACCCGCACGCCGCACCCGCGCACGCGCACGCGGCGGCACACGACCTCTACGACGACTCCAACTCCGGAGACGACATGGAGTTCCGCCTGTCCCCTCTGCACAGCTCCAGCGAGCGCGAGACCGTGCGCGACCGCGCCGGGGACGTGCGCGGGCCCGAGCTGTTCTGCGGAGACTGCGGCGTCGCCTTCCAGCGAGCCGACCTGCTGAGGAGACACGTGGCCGCCGCGCACAGctACAAGCGACACGACAGCACCAGCAGCACGTGGGAGCAGGAGCACACGTGCGACGTGTGCGGAGAGACCTGCACCGACGCACTGCAGCTGCTGGCTCACGCCGAGAGACACGCCGAGCGACCCAGGAACACTAGagtgAAAAGAATGGCCCGAGGCAGAAATAATACTTCAAACAGTTCTAGGCAGTTTCCGTGTAGAGAATGtgGCAAAGTGTTCGGGTCTCGTAGTTCGCAGCAGATCCACGTTCGTATACACACAGGCGAGCGACCTTACGCGTGTCGTTTCTGTTGGAAAGCCTTCGCTGACGGCGGCACGCTTCGCAAGCACGAACGTATACACACGgGCGAGAAGCCGTACGCTTGTGCTGTTTGTCCTCGTGCGTTCAATCAACGCGTGGTGCTGAGGGAACATGTACGGTCGCACCATTCTGCCCCTGACCGACGAGCGCATGGCGGTTATCAATATTGTTGCGTAGTATGCGGGAAGCCACTGCATTCTAGTGCAGAACTGGTTCAACATCTGATCCAACATTGTGATGAAAACACGGCATTGAAAAGACAACCTCAAAATGGCCCACGCAAATACAAACGGCGGCGAAAAATAAAGATCGAGGATTCCCCACCGAGCCGGGAATGGCGACGAGACACTCCGGCCTCGCGATCTCCCTCCGTGGAGGGGTCGCCCTCCCCCTCGCCGACGCCCCCCCGCGGTCGCCCCCCGCGAGCCCCCCGCGTGCCCCCCGCCCATGTCGCCCCGCGGCGGAAGCGGCGACGCGCGCCCCCGCCGCCGCGCCCGCGCATGATACACACTGAGGAACCACGACCCAGAACCAAACAGATTCGTAGTCGAAGACCTCCTCGGCACCCCGCGGACGACTTACGTGCCATCGGAGCGCATTCTCCGTCGCCGGCGCCAGCGTCTCCTTCACCGCCCTCCCCGTCCTCCCCGCCTTCCCCCGTCTCCTCCCCCCCACACTTGAACACGAGCGATGGCCCCTTCAAATGCGAAATGTGCTCGCTAGAGTTTCCCCGACGAGATGCCTTGCTCCTCCACGTGCCCATACATATATGA
Protein Sequence: MEEEEFSLQWEDDKQNIVTTEEVICGLDSVQNESFENMTEEIIADTDQMAAENLMYLSQDVVSYTDSADLAVDPNVECVTEEVITDDWVITGGQERVEVPLEHLANTDQNVKIENDIDVPLPTDQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHSCNLCGVRYVRKCDLMNHLKVHAFVPDNTETMDFDDVISSNPVIKTKKKRGRRKKKPEPVENGVWENMTSARTQQWSRRVRSPQAPAPPPPAPLSPPTPSPQSVPSPPPSPSPPTPPPADPSRPFVCRHCGVGFAREKALQSHARVHGGDSPVECVSCGELCWSREALRAHAAARHPHAAPAHAHAAAHDLYDDSNSGDDMEFRLSPLHSSSERETVRDRAGDVRGPELFCGDCGVAFQRADLLRRHVAAAHSYKRHDSTSSTWEQEHTCDVCGETCTDALQLLAHAERHAERPRNTRVKRMARGRNNTSNSSRQFPCRECGKVFGSRSSQQIHVRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRAHGGYQYCCVVCGKPLHSSAELVQHLIQHCDENTALKRQPQNGPRKYKRRRKIKIEDSPPSREWRRDTPASRSPSVEGSPSPSPTPPRGRPPRAPRVPPAHVAPRRKRRRAPPPPRPRMIHTEEPRPRTKQIRSRRPPRHPADDLRAIGAHSPSPAPASPSPPSPSSPPSPVSSPPHLNTSDGPFKCEMCSLEFPRRDALLLHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00419204;
90% Identity: iTF_00958871;
80% Identity: iTF_00960356;