Basic Information

Insect: Mechanitis mazaeus
Gene Symbol: -
Assembly: GCA_959347395.1
Location: OY365754.1:1157562-1164578[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.1e-06 0.00028 21.7 1.7 1 23 253 275 253 275 0.98

2 9 3e-08 2.7e-06 28.1 1.6 3 23 283 303 281 303 0.98

3 9 0.0001 0.009 17.0 0.3 1 23 309 331 309 331 0.98

4 9 1.1e-05 0.00097 20.0 1.7 1 23 337 359 337 359 0.99

5 9 2.3e-05 0.002 19.0 1.7 2 23 530 551 529 551 0.96

6 9 2.9e-09 2.6e-07 31.3 1.6 1 23 557 579 557 579 0.98

7 9 0.0025 0.22 12.6 0.6 3 23 587 607 585 607 0.97

8 9 6.4e-05 0.0056 17.6 1.5 1 23 613 635 613 635 0.99

9 9 0.02 1.7 9.8 0.8 1 23 641 665 641 665 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.1e-06	0.00028	21.7	1.7	1	23	253	275	253	275	0.98
2	9	3e-08	2.7e-06	28.1	1.6	3	23	283	303	281	303	0.98
3	9	0.0001	0.009	17.0	0.3	1	23	309	331	309	331	0.98
4	9	1.1e-05	0.00097	20.0	1.7	1	23	337	359	337	359	0.99
5	9	2.3e-05	0.002	19.0	1.7	2	23	530	551	529	551	0.96
6	9	2.9e-09	2.6e-07	31.3	1.6	1	23	557	579	557	579	0.98
7	9	0.0025	0.22	12.6	0.6	3	23	587	607	585	607	0.97
8	9	6.4e-05	0.0056	17.6	1.5	1	23	613	635	613	635	0.99
9	9	0.02	1.7	9.8	0.8	1	23	641	665	641	665	0.95

Sequence Information

Coding Sequence: ATGATCAACGAAGTACGCTGGAGTGTCCTAGAGGACATTAGCATTTGTCGAGGGGCGTCTTGGACAGATATAGCCCGCCGCGGCGCGTCACCCATGCATTCACTTTTGCACAAACGTCATTACATAAAGAAATTCATCCAcgcaaATACGACAGCGCCCTATGTCCTTTATAAAGATGGAGTGGAACGCGCACCTCCTGGAACACAATGGGGTGGAGCAGTTTTGGATGGTGGCTATCAGCCGATGCAGCACCAGAGTCCAGGCGGACCTTCGCCGCAGCCTGAGCCGCAGCTTGCGTCTCCTGCTCCCTCACCTTATCCCCCCGCGCCGCCGCCTCCTGACCAGGCAGCGGATGAGGCCGCACAACAGCTTGCTCAGCAACAAGCGCAACAACAAGCGCAGCAGCAAGCACAACAACAAACGTCTCCAGAGCACATGCAAGTTGAACAACAACTTCAGAATCAATCCCAGCCACAACAGCCATCGCAAGACCATCTAGACCGAACGCCGTGCTTTGTTACACAACCTGACTTACAACAACAATATACACCATACTTCAAAGAAACTAGACCGGCAAGCCACATGCTCGGAACTGGTGGTTTTCCATTACACTACCTAAAGCAAAATGGCGGTGTTCTATCATTAGAGGGCCCGCTAGATCAGTATGCAACTCCAGATTTGCGCCACCTACCAGACATTGTGCAACCTGAGCCACCTAAACCTCGGAAGCACAATCCAAATACTGAGCTTCGCCTGTTCAAATGCCTAACGTGCGGGAAAGACTTCAAGCAGAAATCAACCCTGCTCCAACACGAGCGGATCCACACAGACTCGAGACCATACGGGTGTCCAGAGTGCGGCAAGCGGTTTCGGCAGCAGTCACACCTGACGCAGCATCTTCGCATCCACGCCAACGAGAAACCGTACGCGTGCGTGTACTGTCCGCGCTCGTTCCGGCAGCGGGCCATCCTCAACCAGCACCTGCGCATCCATTCCGGTGAGAAGCCATATACGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAACCAGCACGTCCGCACACACCAAGGCGAGCGCTATTCACACATATATGCCCCGCCCCGGTCCCCGCACGCGCCGCCCGCACTGACTCGACCATTTCGCGTCAATGCCGGCGACGCCAGCGATCCCTACCGCCCTTCACCCGTTCGATTCGGTCTCGCATCCATTGGCCTTCCTATCAGACAAATTCTCGGTCCCCTCGTTGCCCGCTTAGCGGAGGGCGCTCGCGAGACGCGGAACCGATCGCCGGACGCTCCCAACGGGACAACGCCGACGTTGTGGCCTCAGGATGTACCATTTCCGCCGGATGAAAACAAGGAAGAGGTGCAGTCGACTTATGGAGATACCGATGGTCAAAATGGCGATCAGCGTGGCTCTTGTTTTTCGCCTGGAGATACCGCGCAGTACCCTGCATACTTTAAAGATACAAAAGGACTCAATCATGCCGTATTCGGATCCAGTCTCTCGCTGCAGTACCTTAAAGGAGGAAAACTGCCCGACGTATTAGGAGGACGCGCTATGCCACTATACGTCCGATGTCCCATTTGCCAAAAAGAATTTAAGCAAAAGTCGACACTTTTGCAGCACGGCTGCATACACATTGAGTCGCGACCGTACCCGTGCCCTGAATGCGGTAAACGTTTTAGACAGCAATCTCATTTAACCCAACATTTACGCATTCACACAAATGAAAAACCGTACGGTTGTGTCTACTGCCCACGATTCTTTCGGCAGCGGACGATCTTAAACCAGCATCTCCGCATACACACCGGCGAGAAGCCGTACAAATGCACGCAATGCGGCAAAGATTTCAGGCAAAAGGCCATTCTGGACCAGCATACGCGGACTCATCAGGGCGATCGGCCATTCTGCTGCCCGATGCCGAACTGCAGGCGCCGTTTCGCCACAGAACCGGAAGTCAAAAAGCACATCGACAACCACATGAACCCTCATGCGGCGAAGGCCCGACGGGCCGACGCGAAGACACCGCGCCCGCTGCCGCCGGCCTCCGCGGTCGTGAAGCCGGAGCTGTACTTCCCTCAGTGCTACGCGCCGCCCTTCCAGCAGTTCCCGACGTCGAGCGCGCCGGAGTTCAAGCCGACGGTGGGCGGCGGCGTGGCGTGTCTCCCCGCGCAGTGA
Protein Sequence: MINEVRWSVLEDISICRGASWTDIARRGASPMHSLLHKRHYIKKFIHANTTAPYVLYKDGVERAPPGTQWGGAVLDGGYQPMQHQSPGGPSPQPEPQLASPAPSPYPPAPPPPDQAADEAAQQLAQQQAQQQAQQQAQQQTSPEHMQVEQQLQNQSQPQQPSQDHLDRTPCFVTQPDLQQQYTPYFKETRPASHMLGTGGFPLHYLKQNGGVLSLEGPLDQYATPDLRHLPDIVQPEPPKPRKHNPNTELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQGERYSHIYAPPRSPHAPPALTRPFRVNAGDASDPYRPSPVRFGLASIGLPIRQILGPLVARLAEGARETRNRSPDAPNGTTPTLWPQDVPFPPDENKEEVQSTYGDTDGQNGDQRGSCFSPGDTAQYPAYFKDTKGLNHAVFGSSLSLQYLKGGKLPDVLGGRAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKARRADAKTPRPLPPASAVVKPELYFPQCYAPPFQQFPTSSAPEFKPTVGGGVACLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01078408;
90% Identity: iTF_00419170;
80% Identity: -