Mmaz021848.1
Basic Information
- Insect
- Mechanitis mazaeus
- Gene Symbol
- retn
- Assembly
- GCA_959347395.1
- Location
- OY365756.1:7665850-7670685[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-20 1.6e-16 61.0 0.0 16 89 31 102 22 102 0.93 2 2 5.7 1.6e+04 -3.0 0.0 25 38 229 242 195 245 0.69
Sequence Information
- Coding Sequence
- ATGGGGGGTTTTGTAAGTGGGAGGGTTATGCAAATAGCGAGTGCGTCGGTCGGCGCACGCGCATCGAATCGCGCGTTTTCAGCTGGGGAAGGCGGCACGCCCATCAACAGATTACCCATCATGGCCAAGTCTGTGCTGGATCTCTACGAGCTGTACAACCTGGTGATCGCTCGCGGCGGCCTCGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGTCTGAGACTGCCTTCCTCCATCACCTCAGCCGCCTTCACTCTACGCACACAatATATGAAGTACTTGTACGATTATGAGTGCGAAAAGAAGAACCTGTCAACCCGCAGTGAGCTGGATGCAGCTATCGAGGGGAACAAACGTGAAGGACGTCGGGCATCTGGACAGTATGATGCCCAGGCGGCCTTGGCTATGCCGCCACTGAACAGAGTGCCAGCGTCTCTAGCGCAACTATCTCAACACATGCAACCCTTGTCGCTATCCCTCGGTGGCGGGGTCGCTGGAGTCCCCCGCCTGCCACCCCTCCCACCACACGCCCCCCACATATCACAACACGATATAGAGTATCGTGTCCGAGAATACATGAAGATGATACAACAGCAGCGCGAGTTGATCAGGAACGGGTCCGAGTCACCCCCGGGGACTTCGATGGTGTCTCCTCGTGAGGCGGCACTGTCAGCTATAGACGTGTCGCGCCTCACTCTGTGGTCGCTCTACAACAATAACAACAACAATAGTCCGCAACCCGAAATAGAACCACAACGCGAGGCCCTAAACCTCAGCGAGAGCCCCACGAACATCAGCATCAAGCGCGAGGCATGTCGCTCGCCCCCCCCGCCTGCCAAGCGTCGCACCCCACGCCCCCCCTCCCCGTCGCCCCCACCTCCCGGCGCCCCGCGGCCCCCCGCGCAGGCCCCCGCCCCCCCGCGCCTCGACGAGCGGCACAATGGAGCCGGCAACGGGGCTGCCTTTAAGATCACCACCAGAGGTGATGCCAGCACGGGCGACCAGCAGCTGGTGGTCTCCATCGAGCTGAACGGAGTTACTTACGAGGGCGTGTTGTTTCCATCACAAAGCGGCAACGAACAGAATGGACATCGGCAAATGGTCTCTTAA
- Protein Sequence
- MGGFVSGRVMQIASASVGARASNRAFSAGEGGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELIRNGSESPPGTSMVSPREAALSAIDVSRLTLWSLYNNNNNNSPQPEIEPQREALNLSESPTNISIKREACRSPPPPAKRRTPRPPSPSPPPPGAPRPPAQAPAPPRLDERHNGAGNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQSGNEQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00959952;
- 90% Identity
- iTF_00959952;
- 80% Identity
- -