Basic Information

Insect: Mechanitis lysimnia
Gene Symbol: PLAGL2
Assembly: GCA_036026155.1
Location: JAYRBX010113763.1:1-2259[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.048 7.3 8.7 0.9 1 23 21 44 21 44 0.96

2 18 4.3e-05 0.0066 18.3 0.8 2 23 114 135 113 135 0.97

3 18 0.00031 0.047 15.6 0.0 1 23 139 161 139 161 0.98

4 18 0.0016 0.24 13.4 1.5 1 23 166 189 166 189 0.94

5 18 0.46 71 5.6 0.5 2 23 197 219 197 219 0.95

6 18 1.4e-05 0.0021 19.8 0.6 2 23 227 249 226 249 0.97

7 18 0.00011 0.017 17.0 2.2 1 23 255 277 255 277 0.97

8 18 0.035 5.4 9.1 0.3 1 10 283 292 283 297 0.91

9 18 0.0082 1.2 11.1 0.2 1 23 354 377 354 377 0.92

10 18 6 9.2e+02 2.1 0.0 2 23 404 426 403 426 0.81

11 18 3.2 4.9e+02 2.9 5.3 2 23 449 470 448 470 0.97

12 18 1 1.6e+02 4.5 0.6 1 19 474 492 474 496 0.83

13 18 0.21 32 6.7 1.5 1 19 501 519 501 521 0.89

14 18 0.038 5.8 9.0 4.4 1 23 531 554 531 554 0.90

15 18 0.0045 0.69 11.9 0.5 2 23 562 584 561 584 0.95

16 18 0.00046 0.071 15.0 0.7 1 23 590 612 590 612 0.95

17 18 5.5e-06 0.00085 21.1 1.2 1 23 618 640 618 640 0.98

18 18 0.00052 0.08 14.9 2.9 1 21 646 666 646 667 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.048	7.3	8.7	0.9	1	23	21	44	21	44	0.96
2	18	4.3e-05	0.0066	18.3	0.8	2	23	114	135	113	135	0.97
3	18	0.00031	0.047	15.6	0.0	1	23	139	161	139	161	0.98
4	18	0.0016	0.24	13.4	1.5	1	23	166	189	166	189	0.94
5	18	0.46	71	5.6	0.5	2	23	197	219	197	219	0.95
6	18	1.4e-05	0.0021	19.8	0.6	2	23	227	249	226	249	0.97
7	18	0.00011	0.017	17.0	2.2	1	23	255	277	255	277	0.97
8	18	0.035	5.4	9.1	0.3	1	10	283	292	283	297	0.91
9	18	0.0082	1.2	11.1	0.2	1	23	354	377	354	377	0.92
10	18	6	9.2e+02	2.1	0.0	2	23	404	426	403	426	0.81
11	18	3.2	4.9e+02	2.9	5.3	2	23	449	470	448	470	0.97
12	18	1	1.6e+02	4.5	0.6	1	19	474	492	474	496	0.83
13	18	0.21	32	6.7	1.5	1	19	501	519	501	521	0.89
14	18	0.038	5.8	9.0	4.4	1	23	531	554	531	554	0.90
15	18	0.0045	0.69	11.9	0.5	2	23	562	584	561	584	0.95
16	18	0.00046	0.071	15.0	0.7	1	23	590	612	590	612	0.95
17	18	5.5e-06	0.00085	21.1	1.2	1	23	618	640	618	640	0.98
18	18	0.00052	0.08	14.9	2.9	1	21	646	666	646	667	0.97

Sequence Information

Coding Sequence: ATGGTTGAGGTGATACTTAGTTCCAACGCAACACCTATTAGGTGTAAAAATGATCTTGGATACGTCTGTATGTTCTGTACTGATCACTATCCTAACCctgcagatttaaaaaaacatactctGATGAATCATGACGAAGAAGCTGTTATAAAAGTGGTGAAAGATATTCGAATGTACACTGTGAAGTTAGATATTACTGATCTACAATGTATTATATGTGAAGTTGATATAGATACTATCGAAGGTTTAATTCAGCATCTCATCAGTGTTCATGATAGAACCTTACATTTGGATATAAAAAACCACATGGTACCATTTAAGTTTAAGGATGATGAACTAAAATGTGCTGTATGTTCGAAAATTTTTACCAAATTCAGAAATTTGACGGAAcatatgaatatacattttaggAATTATGTTTGTGATGTGTGCGGCGCTGGTTTTGTAAATCGTGATATTCTGAGAAGTCATCTTAGGATACATTTAATAGGTACATTTGATTGCGATTATTGTTCAAAGTCATTCAATACGAAAGTGAAAAAGAAATCGCATGTCATTTCGGTACACAAAAAATCATTCATGACACGCAAATGCGGTTACTGCAATGAGTTGTTTGatgattataataagaaaaatgctCACTTAGCCAAAACTCATGGAGTTAATGTAGCTGCTGTGAAATGCAAGCTTTGTGAAAAATCTTTTGCCAATTCAGCTGGTATGAGACGACATATTAAAAAAGATCATTTTTTGGAACGGAAACATGAATGTGATGTCTGTACGAAAAAGTTTTTTGGTAAAAGTGATCTATCCAAGCACATGGTTAGTCACACGGGACAACGGGATTTCTCTTGTAATATTTGTGGAAAGACTTTCGgtgcAAGAGACACCAAAACCATTGTAGTCgaagaaacaaaaattgtacCTAAAATTGAGGAAAATGACAAAGAAGATGTAATACACGAAAAAGGTGTGGAGTTAAAGATGCATAGAAATAATATCCACCAAATATTGTTGAACTCTAACGCTACACCTATCCGTTGTTATAAAGGAATCGGTTATGCTTGTAGTTTTTGTATCAAACAATTCCCTGATCCAGGAGATCTTAAAAAACACACGCTAGACTCACACAATGGaaagtttatattcaaatttatggACGGCACggatttatacaaattttacgTGAAACTTGACATAACAATGCTGAAATGCACACTTTGCGGGATGGATATCGATGATATAGAACAAATGGTAATTCATTTAAcagaaatacataataaaaaactgtatacaaaaataaaaaatcaaatactgCCGTTCAAATTCGAAACTGAAACTCTTCAATGCTTTATTTGTAAGATGTTATATCATAAGTTCAAGTCGTTGCTAGAACACATGCATACACATTACAGGAATTATAATTGCGAAGAATGCGACGCAGGTTTCGTTAATCGTATGATCTTGGCGCAGCATTCAAAATGTCACAAACTAGGTTCATTCAAATGCGATTATTGCGCAAAAGAATTCGATACATTAAGAAAGAAACGGTCCCATGAAAAATGTGTCCACACGCATTCTGTTACTTTATACAAATGTGGATACTGCCATAAGAAATTTAAGGACTACAGGATAAAAGTGAAACACATAAGGCAAGAGCACGGAGTAAGCGACTGTGGATTGAAATGTCGAGCGTGTGATAGAATATTCATTAGTCAGAGAGAATATAATGTTCACGTTAAAAGACTACATTTAATGGACAAACGGTTTAAATGCTTAGAATGTGATATGGCTTTTTTTACGTCTTCTGAATTGAGCAATCATTCTGTGAAACATTCAGGATTAAGGAAGTTTGTTTGTGAGATATGTCACAAAGCTTACGGGCGTCGGAAAACATTACGTGAACACATACGCATACACACAGATGACCGTCGGTTCAAATGCGAGCACTGCAACCAGACATTTGTGCAGAAATGTAGTTGGCGAGGTCACATGCGAGCTAA
Protein Sequence: MVEVILSSNATPIRCKNDLGYVCMFCTDHYPNPADLKKHTLMNHDEEAVIKVVKDIRMYTVKLDITDLQCIICEVDIDTIEGLIQHLISVHDRTLHLDIKNHMVPFKFKDDELKCAVCSKIFTKFRNLTEHMNIHFRNYVCDVCGAGFVNRDILRSHLRIHLIGTFDCDYCSKSFNTKVKKKSHVISVHKKSFMTRKCGYCNELFDDYNKKNAHLAKTHGVNVAAVKCKLCEKSFANSAGMRRHIKKDHFLERKHECDVCTKKFFGKSDLSKHMVSHTGQRDFSCNICGKTFGARDTKTIVVEETKIVPKIEENDKEDVIHEKGVELKMHRNNIHQILLNSNATPIRCYKGIGYACSFCIKQFPDPGDLKKHTLDSHNGKFIFKFMDGTDLYKFYVKLDITMLKCTLCGMDIDDIEQMVIHLTEIHNKKLYTKIKNQILPFKFETETLQCFICKMLYHKFKSLLEHMHTHYRNYNCEECDAGFVNRMILAQHSKCHKLGSFKCDYCAKEFDTLRKKRSHEKCVHTHSVTLYKCGYCHKKFKDYRIKVKHIRQEHGVSDCGLKCRACDRIFISQREYNVHVKRLHLMDKRFKCLECDMAFFTSSELSNHSVKHSGLRKFVCEICHKAYGRRKTLREHIRIHTDDRRFKCEHCNQTFVQKCSWRGHMRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -