Mlys004666.1
Basic Information
- Insect
- Mechanitis lysimnia
- Gene Symbol
- ZNF131
- Assembly
- GCA_036026155.1
- Location
- JAYRBX010000033.1:109559-114632[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.0056 0.85 11.6 3.4 2 21 165 184 164 185 0.94 2 28 0.67 1e+02 5.1 3.1 1 23 218 241 218 241 0.96 3 28 0.0018 0.28 13.2 1.6 2 23 247 268 246 268 0.95 4 28 0.1 15 7.7 2.2 3 21 273 291 271 292 0.93 5 28 0.0012 0.18 13.8 0.3 2 23 336 358 335 358 0.95 6 28 7.5 1.1e+03 1.8 0.4 3 23 366 385 365 385 0.85 7 28 0.0036 0.55 12.2 1.1 1 23 391 413 391 413 0.98 8 28 0.0025 0.38 12.7 0.5 1 23 419 442 419 442 0.97 9 28 0.025 3.8 9.6 0.8 1 23 451 474 451 474 0.91 10 28 0.049 7.5 8.6 5.8 1 23 485 507 485 507 0.98 11 28 9.4e-05 0.014 17.2 0.2 2 21 631 650 630 651 0.95 12 28 0.11 18 7.5 0.2 3 23 657 677 656 677 0.94 13 28 0.0034 0.51 12.3 4.7 1 23 682 705 682 705 0.97 14 28 0.027 4.2 9.5 0.4 2 23 711 732 710 732 0.95 15 28 5.3 8.1e+02 2.3 3.2 1 20 735 754 735 756 0.91 16 28 0.00093 0.14 14.1 1.4 1 23 768 791 768 791 0.93 17 28 0.00028 0.042 15.7 4.7 1 23 797 819 797 819 0.97 18 28 4 6.2e+02 2.6 0.3 1 23 853 876 853 876 0.87 19 28 0.0039 0.59 12.1 1.6 2 21 1000 1019 999 1020 0.93 20 28 1.4 2.2e+02 4.1 0.0 3 23 1027 1048 1026 1048 0.94 21 28 0.036 5.5 9.1 1.1 1 23 1053 1076 1053 1076 0.95 22 28 0.00032 0.048 15.5 2.7 2 23 1082 1103 1081 1103 0.97 23 28 1.7 2.5e+02 3.8 1.5 2 21 1107 1126 1107 1127 0.91 24 28 1.6e-05 0.0025 19.6 1.5 1 23 1153 1176 1153 1176 0.96 25 28 0.00051 0.077 14.9 0.5 1 23 1182 1204 1182 1204 0.95 26 28 0.33 51 6.0 0.2 1 23 1210 1232 1210 1232 0.97 27 28 0.0052 0.79 11.7 0.7 1 23 1238 1261 1238 1261 0.94 28 28 0.00051 0.078 14.9 5.5 2 23 1268 1290 1267 1290 0.95
Sequence Information
- Coding Sequence
- ATGAGCAAACAAGTGGACGTAAAAGCGTTAGTATCTCACGTAGTTCGCGGGGACGGTGTTCAAAAATGCCGAATCTGTATGGGAGACACTTCCGAAGGACAAGTCCATTTAGGAGATACTGTGATGATGGACGGTGAAAAACCTATAACTCTTTCTGAACTGCTAGAAACAGTTACTGGAGTCCAGGTGCTGCTAGAAGGGGACCTGCCAACCGGAATCTGCCCAGCTTGCCTTATGTGTGCTCTAAATGCTGCAGAGTTCCGCTCACAGTGCCAACAGGCCGCTAGCCAATGGGATCTGACTATTGAACTATTGAGTGGGTTATCATCACAATATGATAGTACAGAAAAAACAATCTTTGCTCTAttggaaaaaaatcaaatgattattattaaagatgaaAGTTCAATTAATCTGGAAAACGCAGTAAATAGATTGAATGAACACTTGTCTAAACCAAGTGAAGTGAAGAATGAGTATCCAATATCTTGTACATGTCCAAATTGTGGGAAAGAATTTCAATTTGCTCATCAGTTAAGTCACCATTTGAAAGAATCGACAGACTTACAAAGGGCATGTTATATTTGTGCTGATATCATGCCTCGGAATGAGTTAATTGGACACATGTCTGAAATTCACAACAAAGAGGCATATGATTGTAAAAAGTGTCCGGCCATGTTGTGTTCTTATAACCAGTATAAGATGCATTTATCAAAGTCGCACGCGCATTCTGCTTGTACGTGTGTTGAATGTGGTCGTAGTTTTCAAACACCCCACGCTTTTTATGCTCACGTGTCTGTGCACAAAGCTCAAAACTGTCCTAGTTGTGACAAGTTGTTTCGTAATCAGACTTGTTACATTCATCATGTAAAGGGTTGCTGCAATCTAGACAAAAATAGAGAGGATACGTTCCGTACGAAAACAAAAGTGACCGTGGaggttaaaaatgaaattagcaAACGCAAGATTAAGGTTGGTCTCCGAGGAAGTGCGAATAAGGAATGCGTTTGTGACTATTGTGGTAAAAAATTTGCGGGGAAAAAGTTTGTTGCAGCTCACATCCAGATTGTTCATATGAAAAACACCCATCGACCTTGTGTTTATTGTGGGAAATTCTTGGCTGCTGCTCATATGTCTGAACATGTTAAAAAACATGAGATCGACCGGTCATATAGCTGCGAACACTGTGGCGTCGTCCTTAAAACTCGACTAGGATATACCCAACATTTAAGGCTTCATACTGGCGAGAGACCATATGCGTGTAAAATGTGTGGCCAAACATTTTCTGCTTCTTCTAGACGCTCGGAACATATTCGTAAAGCccacaaaaatattgaagttgTATTGAAACATGCGTGTAAATTTTGTCCTGCCAAATTTCGTCTGCCGTATCGTTTAAAAAAGCATTTGATCGCAGTACACAATAATGAAAACGAAAAAATTACATTGGATTTCGAATGCAAGCAATGCAACGAGAAGTTTGGTTCCTGTCGCGGTCTACTGCATCACAGCCGCAAACATCAAAACATTCCGTTCCCACCAAAGAAACCAGAGAAGTCCATGATGTTCAAGGTGCTGGAGGATACAGAACTGCCACCAGGGCTGTGCTGCGATTGCTCGAACACTGCTCTCCTTGTATGGCAGTTCAGGCATCTTTGCCAGCAATCCGACCGCAAATGGAAAAGCACTATCGATTTCCTGAACAGCTCTGACCTAATGCCTTCAATAGATtgcaaatctttttatatatgctgtgctgaagaaaatatttacaaagacaaTACTGAAGTCAAAAGCCTTACAGCAGCAGCAGCGAGATTGAATTTTGTCATCAAAAGAAAAACGATGcgaccaaaatataaaaaacatgcaAAAATCAAAGGGGAATCTAAATGTGGTGATTGTGGGAAGAAATTCGCCCTTCCGTATTATTTGAATAGacatttgaaaaatactttgaaacGCGCGTGTACTGAGTGTGGCAAAATAGTGCAGAAAGATAAATTGGCTACACATTTAgtcaaatttcatcaaaaatcCGTTTATCATTGTGATATTTGTCACAAGCTTTTTGATGAAAAGCAGAGTTTGAATCGACATAGGAACTCGCTTCATAGTGATGAATCTTTAGAGTGTCATGTCTGCAGGAATGGTTTTACAAGCGACAGATCGTTAGCCGCCCATATGTACGCACATACGTTGTTCAATTGCACCTCGTGCAATACCGGCTTTGAAAACCGAAAATGCTATATATATCACAAAGAAAGATGTACTGGAAGGAAAGTAAATACTGAAAATGTATACGAATGTCACGACTGTGGtagtaaatatacaaagaaaccGTCACTCCGAATTCATATTGTGCAAAAACATTTGAACGTGTTGCCATTCGTTTGTCAAACATGTGGCAAGCGCTGTTCTACCAAGAACCACTTGACATCCCACGAGCTGGTGCACAAAATCGAAAGAAAAATCTATGAATGTTATTGCGGTGCTAAAATGCGATCTGCCCTTGGATTTGAAATGCACCAAAGGATACATTCAGGGGAGAAACCTTATGTATGCGATGTTTGTGGAGACAGATTTCTGTCTGCTTCTAGAAGGTTGGAtcacattaaaagaaaacatagaAGCAAAGAACTCGCCCATGGTTGTGACAGGTGTGATGCGAGATTTttAAAAGAAGAAATGTTTGTTCCGAGAGGACTTTGCATCTCGTGTTCGAGCACAGCGATTACAGCTTACGAATTCCGTATGTTCACAAGGAAATCAGCAACTTTATGGACAACTTGCATCAACACCATAGACACTCTACCAAAATTGAACAAGCATAAATCAATATACGCTATAATAAGGGACAATATGACGCTGCAAACAGTGAACAGCTTTGATGGAAAAAGAATAGACCTTGTTGAACACCTCTCCAATCGGTTGATAAAGAAAAAACCAGTTATTGATGAAAGAAAACCGAGACATCCAAGAACAGGGCCGGCCTGCAGCTGCAAAGACTGTGGAAAATCATTTTTGAGtccatatttcttaaatttacatttacgaAATAGTGGACAAAAAGAGGCGTGTTGGTTATGTGGTGCCATGGTGGCTAGGGGTCGAGATTTGAGAGAACACTTGGCAATAGTACATAAAACAGATATGTTTCTGTGTCCAGACTGTCCCAATCTCTTTAAAAGTGAACAGGACCGCAAAAGACATCTTAAAAAATACCATGGTCCTGGAAACTTGACTTGTTCTGATTGTGGAAGGACCTTTCAAAGACACACTTCATTTGAGGTTCACACACAAATGCACGCAGTGAGGACGTGTCGTGCGTGTGGAGCTCAGTTCACAAACCGTGGCTGTTACAGAGAACACAGGTCAAAATGTGAACCAGACGCTAAGCCGGATAGAAAAACAGTGCCTCGGAGCCGTCGCTCTAACGTCCGAGACCCGGCCACGTTCACATGTGACTATTGCGGAAAGACTTACCACTCGCGACCTCAACTTAAAAACCACATAATGTGGATTCACATGGATGTCAGACCACATCAGTGTCAATGGTGTGGCAAGCGATTCTACACTCCGGCTCGTTTGGCAGAACATACGGTCGTGCATACCCGCGTAAGGAATTTCGAATGCGATATTTGTAACGCAAAATTGGTatccaaaatggccgccgtGTATCATAGGCGGCGTCATACGGGAGAACGTCCCTATGAATGTCAAGACTGTGGTGAAAGATTTATCTCGTCCTCCCGCAGGTCGGAGCACGCGAAACGTAGACACAACAGAGGTTCGCGACTTCAGTGTCTTCATTGCCATGCAACTTTTGTAAGAAATCACGAACTCAAAAAACACATGGATAAAATTCACAGTTCAGAAAACAATGATGTTGTggttaaagtaaaaaaagtgaAAGAATATCCAGTTACGAAtgtttga
- Protein Sequence
- MSKQVDVKALVSHVVRGDGVQKCRICMGDTSEGQVHLGDTVMMDGEKPITLSELLETVTGVQVLLEGDLPTGICPACLMCALNAAEFRSQCQQAASQWDLTIELLSGLSSQYDSTEKTIFALLEKNQMIIIKDESSINLENAVNRLNEHLSKPSEVKNEYPISCTCPNCGKEFQFAHQLSHHLKESTDLQRACYICADIMPRNELIGHMSEIHNKEAYDCKKCPAMLCSYNQYKMHLSKSHAHSACTCVECGRSFQTPHAFYAHVSVHKAQNCPSCDKLFRNQTCYIHHVKGCCNLDKNREDTFRTKTKVTVEVKNEISKRKIKVGLRGSANKECVCDYCGKKFAGKKFVAAHIQIVHMKNTHRPCVYCGKFLAAAHMSEHVKKHEIDRSYSCEHCGVVLKTRLGYTQHLRLHTGERPYACKMCGQTFSASSRRSEHIRKAHKNIEVVLKHACKFCPAKFRLPYRLKKHLIAVHNNENEKITLDFECKQCNEKFGSCRGLLHHSRKHQNIPFPPKKPEKSMMFKVLEDTELPPGLCCDCSNTALLVWQFRHLCQQSDRKWKSTIDFLNSSDLMPSIDCKSFYICCAEENIYKDNTEVKSLTAAAARLNFVIKRKTMRPKYKKHAKIKGESKCGDCGKKFALPYYLNRHLKNTLKRACTECGKIVQKDKLATHLVKFHQKSVYHCDICHKLFDEKQSLNRHRNSLHSDESLECHVCRNGFTSDRSLAAHMYAHTLFNCTSCNTGFENRKCYIYHKERCTGRKVNTENVYECHDCGSKYTKKPSLRIHIVQKHLNVLPFVCQTCGKRCSTKNHLTSHELVHKIERKIYECYCGAKMRSALGFEMHQRIHSGEKPYVCDVCGDRFLSASRRLDHIKRKHRSKELAHGCDRCDARFLKEEMFVPRGLCISCSSTAITAYEFRMFTRKSATLWTTCINTIDTLPKLNKHKSIYAIIRDNMTLQTVNSFDGKRIDLVEHLSNRLIKKKPVIDERKPRHPRTGPACSCKDCGKSFLSPYFLNLHLRNSGQKEACWLCGAMVARGRDLREHLAIVHKTDMFLCPDCPNLFKSEQDRKRHLKKYHGPGNLTCSDCGRTFQRHTSFEVHTQMHAVRTCRACGAQFTNRGCYREHRSKCEPDAKPDRKTVPRSRRSNVRDPATFTCDYCGKTYHSRPQLKNHIMWIHMDVRPHQCQWCGKRFYTPARLAEHTVVHTRVRNFECDICNAKLVSKMAAVYHRRRHTGERPYECQDCGERFISSSRRSEHAKRRHNRGSRLQCLHCHATFVRNHELKKHMDKIHSSENNDVVVKVKKVKEYPVTNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00461757;
- 90% Identity
- iTF_00960328;
- 80% Identity
- -