Mlys012082.1
Basic Information
- Insect
- Mechanitis lysimnia
- Gene Symbol
- -
- Assembly
- GCA_036026155.1
- Location
- JAYRBX010024062.1:1-577[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-12 3.5e-09 37.7 0.0 4 40 59 96 56 99 0.89 2 2 0.00013 0.42 11.8 0.4 2 26 111 135 110 135 0.91
Sequence Information
- Coding Sequence
- ATGATGAGTGCTAACGAGGTAGCGGATTCTTCAGAATTCGTGCCCCTCATGGCTATTAAGGATGAACCAAGTTCAGAGGGAGAACAGCCACATCTAAGCGGCGACGACACGAGCGACTCCAACGGTCCGACGACGGAGACCAGCCGCGGCGGTCCCAAGACCTGGACGCAGCAGGATATGGATAAAGCGTTGGAGGCGCTCCGGAAACATAATATGAGTCTCACTAAGGCTTCTGCGACATACGGTATTCCGTCCACAACTCTCTGGCAGCGAGCTCATCGCCTCGGCATCGACACGCCCAAGAAGGAGGGCAGTTCTAAATCCTGGAACGAGGCGGATCTACGTGGAGCACTGCATGCGCTTCGGGCCGGCGCCATATCTGCCAATAAAGCCAGCAAGGCCTACG
- Protein Sequence
- MMSANEVADSSEFVPLMAIKDEPSSEGEQPHLSGDDTSDSNGPTTETSRGGPKTWTQQDMDKALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGSSKSWNEADLRGALHALRAGAISANKASKAY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -