Mlys004068.1
Basic Information
- Insect
- Mechanitis lysimnia
- Gene Symbol
- Mblk-1
- Assembly
- GCA_036026155.1
- Location
- JAYRBX010000023.1:514643-516745[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-15 1.7e-11 45.1 0.0 1 38 122 160 122 164 0.95 2 2 5.6e-19 1.8e-15 57.8 0.0 1 43 328 371 328 373 0.95
Sequence Information
- Coding Sequence
- ATGTGGGTCGCACGACTcgccaaaacaaataaaaatgcacCGATAGTCGGTGCATCGACCTTCATCGCTGTGAGCGCTGTGAACAGACAAATCACCCCTCTCCCTCCTCACAATAAGGTCTTATATTCCCTGTCAATGATATcgaaaaataagaaagtaaaatcCAAGATGAAACTAAAGACGACCCCTCGCGCTCACAGCAAATTCAACTGTAAAATTATGAGGATAAAGTTTCATATTGCGTCCCGAGCTCTCGGAAATAAAAGACGAAGGGAAAAAGATAAAGACGCATTCATAGCAGTCCGTTATCGATTAAAACGATCAGCGCTGGATGGGTCAGGGAACAGCACGCGGCGCGCGTACACTGAGGACGAGTTGCAGTCGGCCTTACGAGACATACAGTCGGGGAGGTTAGGGACGAGGAGGGCGGCTGTCGTGTACGGCATCCCCCGCTCCACCCTCCGAAACAAGGTCAACAAGTTCGGTCTCGCTCCAGACACAGGACAAGAATCCGACCCCGACAGCGAACCGGACAAACCTGATTCCCCGCCGTCGGTCATCCTCAAAATACCGACGTTCCCGCCGCCCGACGACAAGAGTCCCTCACCGGCAGGCCCGGTGACCGCCCCCGTGACTCCACTCACGCCACTCCTCCAACCACAGCCGCCTCTCAACCCACCCTCGCAGTTGCTGCTGTCGCCGTCGGTTTTCGCGGATCCCTCTACCCCCCGGCATCTCTTCACGTCGTTAAACGACGTCATAGCCAAGAGCATCAGCCAGAAGTTCCAACAGCCTCTCGACAGGCCTCAGCCGTCGGACCTGCAGTTCCTCCGCGCTCCCGACCGCCACGTGTCCGTCATCAAGACGCCACCCGACCAGCGTTATGGGATGCCGAGCAACTCCAAGGCGACGTCCAACAACAACGGCCAGCCCGCAACCGGCAAGGGCACGCGGCCCAAACGCGGAAAGTACCGCAACTACGACAGGGACAGCCTCGTGGAGGCCGTAAAGGCGGTGCAGCGCGGGGAAATGTCCGTGCATCGAGCCGGCTCGTACTACGGCGTGCCGCACTCCACGCTGGAGTACAAGGTCAAGGAGCGCCACCTCATGCGGCCACGGAAACGCGAACCCAAGCCGCAGCCCGACGTCAAACCGCAGCCGCCGAAGCCACCCCCGAAGCCGCCGACGAAGCCCTTCACGAACGGCCTCAACGGCCCCGAGGGCTACCCCGCCGGCTACCCGTTCTGGGCGGGCGCCGGGTTCGCGCCGCACGCGCCGCCCGACCTCGGCCGGGCGCGCCGCCCGCCTCTCCGCCGGGCGCGGGGGGCGGAGCGCCCGAGCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGCGCGCCTCGACGCCGACCACCAGCTGGCGGCCGACATGCGCGAGGCGGTGCAGCGCCTGCGCGCCGACAAGCTGCGCCCGCGCAACGGCACGCCCACGCCGCCGCCCGCGCCCCCCCCCGCGCCCGAGCGCGCCTAG
- Protein Sequence
- MWVARLAKTNKNAPIVGASTFIAVSAVNRQITPLPPHNKVLYSLSMISKNKKVKSKMKLKTTPRAHSKFNCKIMRIKFHIASRALGNKRRREKDKDAFIAVRYRLKRSALDGSGNSTRRAYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLAPDTGQESDPDSEPDKPDSPPSVILKIPTFPPPDDKSPSPAGPVTAPVTPLTPLLQPQPPLNPPSQLLLSPSVFADPSTPRHLFTSLNDVIAKSISQKFQQPLDRPQPSDLQFLRAPDRHVSVIKTPPDQRYGMPSNSKATSNNNGQPATGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDVKPQPPKPPPKPPTKPFTNGLNGPEGYPAGYPFWAGAGFAPHAPPDLGRARRPPLRRARGAERPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLDADHQLAADMREAVQRLRADKLRPRNGTPTPPPAPPPAPERA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01078995;
- 90% Identity
- -
- 80% Identity
- -