Mlys005525.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mechanitis lysimnia
Gene Symbol
JARID2
Assembly
GCA_036026155.1
Location
JAYRBX010000034.1:9588029-9596141[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.9e-15 4.1e-11 44.6 0.0 6 88 514 593 510 594 0.87

Sequence Information

Coding Sequence
ATGGACATCGataatCTTCCAGAGACATTGACGTCATTTAATTGCGACGACGAGGACCACGAGCCATCGTCATGTTTAAATCAAGACACAGTTGCAGGAAGTTCATCTCCAGTCTCAGATCCTGTTAAAGAAACACCTATATCCGATATATATCAAAATCCAGTCCCAGGAACGTCATCTTCACATAGGGATCCTGTTCCAAGCACTTCTACTGCATCTATTTATGATGACCCTGTCCCAGGGACATCATCTTCTTATCGAGATCCTGTACGAAAAacatgttcaaatatttatcgCAACCCAATCCCAGGAACATCATCTTCGTATAAGGACCCTGTTCCAAGCACTTCCAAATCATCTGTATATCAAGATCCTGTCCCAGGAACATCTAGTATTTATGATAATCCGGTCGCTGGGACGTCTCAATCTTTCCTCCATGAAGAAACTATATCAATTTGTAGTTCGTATAAGGAAGAATACGAATTAGAATCAGCAATCGATTTTGAAGAAGTAGATGGGTTTAAATTACAGAATGAAACAACATTATTACAGCAGCCTCCTTTTTACGGAATAAAAGAGATTGACAACTGGGTGTCATCGAGAATGACTTTTGTACCGCCATTGGCTCAAGTCGCCACTAGAAAATCAAGAAAGCGCAATGATCAGGTCTTAAATGAGGAGAATCTTAGAAGAGCAAACGAAGAATCAGTTTCAAGTGCGAATGATAATACAAGTActttaaacattgttattagtAATGTAAGGGGTAGAGATACAGGTCTTGAGTCTATAACTATCGATGATGAcgatgaaaaagaaataaaaactattgatttaaCTGAAGACAGTAacgatgttaattttttaaaagaatcgcCTATACAAAATGTTGTTCAGCATGAAGTTCTAGTACACAATGATGCCCATAAAGACATGCCGGTACAAAATGATGCCCAGAAGGAAATACCGGTACGAAATGGTGTTCAGCATGAAATGCCGTTACAAAATGATGTTCAGCACGAAATACCGGAAGAAAACGATGTTCAGCACGAAATATCGGAACAAAATGTTGTTGATGATGAAACAACGGAACAAAACGTCGTCCATCAGGAAAGTCCAGACGTAATTGAGATACAAGAAGAAACAAATGCGAGAAGAACATCTCCGCGTGGTCGTAGAAAGAGAGGAAGAGGGAGAACCACTAATGGTCCTACGACGAGACAACAAGCTGCCGCCAATGCAAATGCCAAACGAAAGAAGAAGGATACAAACGAAACAATCGACCCATCACTACCGATAATAGTGCAGCGTGCTGAGCTCATAAATGCTCCGGTGTTTTATCCAAGTATACAAGAATTTGCggaTCCAATGACGTATTTGGAACAGGTTATGCCCTCAGCTGCCCAGTTTGGACTGTTTAAAGTTGTATCACCAGAAGGCTTCCAACCTCCTTGCACAATGGGAGACAATGCTAGATTCAATGTTACAAATCAATATATTGCTCGCCTCTTCAGCCGCTGGGGACCTGCTGCAAGAGAAATGTGTACAATCCGCGCATATTTAGCATCTCAGAAGGTGTTCTTTTCCCGAGCGCCCCtgctTGATGGCTTGGAAGTGAATTTACCTAAACTATTTCATACCGTCCAAAGACTTGGTGGCTTGAAagcagtattaaataaaaagaaatggaCTCGAGTTGCTGAAgagttaaaaatgaaaactgtACCCAATCCTGACaagaaatttgattttttgtgCTTAAAATATTTGCTGCCATACAATACTTTAACTAAAAGAGAGCGTCAAGCCATGATGGTGAAGGTTGAGCAAGAGTGGTGTAAAAGAAGCGCTAAAATGTTAGCTCGGGTTACAAATCCACTTCATCAACAAAAACGATTATTGGGTGATTCCGACCCAtctgatgacgatgatgatccAGATGAAGACGATGTCTATGCTCAGGCACTCAGTGAGGCCGAGGACTGCGTGGTGCGAGGTCGAAATATGTGTCTCGGGACATTTAAACGGattgCGGACAcagctttaaaaatgtatttcccACCCGGAGATCCACCACCTACTACTGCTGCTGTAGAAGATCTCTATTGGAGCATAGTACTCCTTGGCACTGACCATGTGAGCATCAACTCTGCGTTCATCGATAGCGGTCCAGAAGGATATGGCTTCCCCAAGAACAAGAACGCCGCATACGGCAAGCATCCGTGGAACCTTAAGATGCTGAGtagcaacaataaaaatattctgcgCTACCTTGGCTTAGCATCGGGTGTCACAGTTCCCTCCATACACGTGGGCATGGTGTTCTCCACCAGCTGCTGGCATCGTGACCCACATGGCCTCCCCTGGATCGAGTATATGCACGAGGGACCTGATAAAATTTGgtatGGCGTACCGGAAGGACAAAGTAAAAATTTCCGTACTGCTGCAGAGAAATTGTGTCCTACATCTTGCCAGCACAAGCCTATATGGTTGTCGTCTGACATCGCAATGATCCCGCCTAACTTGCTTCTTGATCAAAATGTGCGTTTATCACGCGTTGTTCAAAGACCCGGTGAATTCATAGTCGTAATGCCGAGAGCATATTCTTGCTCCATATCCACCGGTTTTACTATATCGGAGAGTGTATACTTCGCTACGAACTCCTTCCTTCAGAGAGTTTACCCGGTCTTtcagGAGCTACGAGAGAGCTGTGAGGGGTCAATATTTTCACTCGAACAGCTGCTAATAGCCATGTCCAAGGACACACGTGCTCCGCGCTACCTGCAGCACCAAGTGCACGGATATCTCAACACAATAGTGAACCAGGAACTTGTGTACCGGAACGCCCTCACGGAATTAAAAGTTCCGTTGCAACATGTTAAACGACGTGTGGTGTTATGGAACTGTAGAGACGACGAAGAATGTCAAATATGTAGGACTGCGCTGTATTTGTCGAAGGTTATAGGAGTTTTCGGCAAGAAGTCTAAACTTTGCCAACAACATGCATTGAGAGTTTTAAATGACCGCAAAGAAGATGATAAATTAGATCTGACTGGGATAGTATTAGAAGTCTCTATGACTTATGATGAACTGGATGAAATTATACTGAATTTGCAAAAGAACCTATTATCCAATTGGTAA
Protein Sequence
MDIDNLPETLTSFNCDDEDHEPSSCLNQDTVAGSSSPVSDPVKETPISDIYQNPVPGTSSSHRDPVPSTSTASIYDDPVPGTSSSYRDPVRKTCSNIYRNPIPGTSSSYKDPVPSTSKSSVYQDPVPGTSSIYDNPVAGTSQSFLHEETISICSSYKEEYELESAIDFEEVDGFKLQNETTLLQQPPFYGIKEIDNWVSSRMTFVPPLAQVATRKSRKRNDQVLNEENLRRANEESVSSANDNTSTLNIVISNVRGRDTGLESITIDDDDEKEIKTIDLTEDSNDVNFLKESPIQNVVQHEVLVHNDAHKDMPVQNDAQKEIPVRNGVQHEMPLQNDVQHEIPEENDVQHEISEQNVVDDETTEQNVVHQESPDVIEIQEETNARRTSPRGRRKRGRGRTTNGPTTRQQAAANANAKRKKKDTNETIDPSLPIIVQRAELINAPVFYPSIQEFADPMTYLEQVMPSAAQFGLFKVVSPEGFQPPCTMGDNARFNVTNQYIARLFSRWGPAAREMCTIRAYLASQKVFFSRAPLLDGLEVNLPKLFHTVQRLGGLKAVLNKKKWTRVAEELKMKTVPNPDKKFDFLCLKYLLPYNTLTKRERQAMMVKVEQEWCKRSAKMLARVTNPLHQQKRLLGDSDPSDDDDDPDEDDVYAQALSEAEDCVVRGRNMCLGTFKRIADTALKMYFPPGDPPPTTAAVEDLYWSIVLLGTDHVSINSAFIDSGPEGYGFPKNKNAAYGKHPWNLKMLSSNNKNILRYLGLASGVTVPSIHVGMVFSTSCWHRDPHGLPWIEYMHEGPDKIWYGVPEGQSKNFRTAAEKLCPTSCQHKPIWLSSDIAMIPPNLLLDQNVRLSRVVQRPGEFIVVMPRAYSCSISTGFTISESVYFATNSFLQRVYPVFQELRESCEGSIFSLEQLLIAMSKDTRAPRYLQHQVHGYLNTIVNQELVYRNALTELKVPLQHVKRRVVLWNCRDDEECQICRTALYLSKVIGVFGKKSKLCQQHALRVLNDRKEDDKLDLTGIVLEVSMTYDELDEIILNLQKNLLSNW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-