Basic Information

Gene Symbol
Gatad1
Assembly
GCA_029286785.1
Location
JAGSMX010000002.1:13002865-13003629[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-08 2.8e-05 24.0 1.9 1 33 6 36 6 38 0.92

Sequence Information

Coding Sequence
ATGCCTAAACCAACTTGCGTACAATGTAATAGCAATGACTCTTTGCTCTGGCGAAGTGTTGAAAGCGGTCAAATATGTAACGAAtgtcacataaaaaataatttaaataaagaaggaaGATTAGACACTTCAGCAGTGAGATCTGAAACCAATAATAAAACAGAAGACAAAGGTGACATCGAAGCAAAAAATGGGAAAAGTGAATTTGATTCAACACCCGCTAAAGCCACTGGCAAGGGGACACGAAAAAGTACAAGAGCGACTAGGTACAAGTCAAAAACTCCATTTGCGACGCCGTCAAAACCTCCTGCGCCGCGTGGAAGAGGTCGGAGGAGTATTTTTAAACGTCAGCCTGTAAAGGCACCGACTGCAACAGCGACCGTAGTAACCAGTGACTCTATATTTTATAAGGGTAGTTATATGCAAGTTGGAGACATAGTTTCAATGATAAGCATTGAAGGGGGTACATACTATGCTCAGATCCGAGGTTTTCTCACTGACCAATATTGTGAGAAAAGTGCTGTTGTCACCTGGTTATTACCAACAAGAGCCAGCCCTCCTCCTGAAGATGGTTTTGACCCTGCAACATATATTTTTGGTCCAGAAGAAGACTTGCCACGTAAATTGGAATACATGACGTTCGTGATGCATGCTCCATCTGATTATTACAAGGATAGCAAGAGCCCGTACCCCCTAACTGAAACGCAACTCAATGATTACAATGGTTACATTTGGACAACTTTAGAGACAggaaaaactaattaa
Protein Sequence
MPKPTCVQCNSNDSLLWRSVESGQICNECHIKNNLNKEGRLDTSAVRSETNNKTEDKGDIEAKNGKSEFDSTPAKATGKGTRKSTRATRYKSKTPFATPSKPPAPRGRGRRSIFKRQPVKAPTATATVVTSDSIFYKGSYMQVGDIVSMISIEGGTYYAQIRGFLTDQYCEKSAVVTWLLPTRASPPPEDGFDPATYIFGPEEDLPRKLEYMTFVMHAPSDYYKDSKSPYPLTETQLNDYNGYIWTTLETGKTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01142087;
90% Identity
iTF_00958390;
80% Identity
-